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Curr Microbiol (2008) 57:503507 DOI 10.

1007/s00284-008-9276-8

A Rapid and Easy Method for the Detection of Microbial Cellulases on Agar Plates Using Grams Iodine
Ramesh Chand Kasana Richa Salwan Hena Dhar Som Dutt Arvind Gulati

Received: 15 May 2008 / Accepted: 30 June 2008 / Published online: 23 September 2008 Springer Science+Business Media, LLC 2008

Abstract Screening for cellulase-producing microorganisms is routinely done on carboxymethylcellulose (CMC) plates. The culture plates are ooded either with 1% hexadecyltrimethyl ammonium bromide or with 0.1% Congo red followed by 1 M NaCl. In both cases, it takes a minimum of 30 to 40 minutes to obtain the zone of hydrolysis after ooding, and the hydrolyzed area is not sharply discernible. An improved method is reported herein for the detection of extracellular cellulase production by microorganisms by way of plate assay. In this method, CMC plates were ooded with Grams iodine instead of the reagents just mentioned. Grams iodine formed a bluishblack complex with cellulose but not with hydrolyzed cellulose, giving a sharp and distinct zone around the cellulase-producing microbial colonies within 3 to 5 minutes. The new method is rapid and efcient; therefore, it can be easily performed for screening large numbers of microbial cultures of both bacteria and fungi. This is the rst report on the use of Grams iodine for the detection of cellulase production by microorganisms using plate assay.

microorganisms also have many potential biotechnologic and industrial applications. Cellulases are required in large quantities because of their application in many industries, such as textiles, detergent, food, animal feed, bio-fuel, paper and pulp, pharmaceutical, and waste management [25, 8, 11, 12]. The rst step in the development of an industrial process for the production of an enzyme is to isolate the potential strains. Isolation and screening of microbes for cellulases is of immense importance keeping in view the demand for new enzymes and the improvement of their biotechnologic applications. An easy, fast, and environmentally friendly qualitative method is described for screening microorganisms producing extracellular cellulase on agar plate.

Material and Methods Soil Samples and Microorganisms Soil samples were collected from different locations of western Himalaya (Himachal Pradesh, India) for the isolation of bacteria-producing cellulases. Samples were transported to the laboratory and stored at 48C until used. Ten-fold serial dilutions of each soil sample were prepared in sterilized distilled water, and 0.1 ml diluted sample was spread on the surface of nutrient agar medium (0.3% beef extract, 0.5% peptone, 0.5 % NaCl, and 1.7% agar [pH 7.0]) for bacteria; potato dextrose agar (20% potatoes, 2% dextrose,1.7% agar) (HiMedia, India) was used for fungi. Plates were incubated at 28C for 48 hours for bacteria and 96 hours for fungi. Morphologically different colonies appearing on the plates were puried on the respective medium for bacteria and fungi. The puried isolates were preserved at 48C and used during the course of study. The

Introduction The term cellulases refers to a group of enzymes that catalyze the hydrolysis of cellulose into sugars. Cellulolytic microorganisms play an important role in the biosphere by recycling cellulose, the most abundant carbohydrate produced by plants [1]. Cellulolytic enzymes from
R. C. Kasana (&) R. Salwan H. Dhar S. Dutt A. Gulati Institute of Himalayan Bioresource Technology (CSIR), Palampur, HP 176061, India e-mail: rkasana@ihbt.res.in; rameshkasana@yahoo.co.in

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R. C. Kasana et al.: Rapid Method for Screening Cellulases

actinomycete Streptomyces sannanensis MTCC 6637 was obtained from the Microbial Type Culture Collection & Gene Bank, Institute of Microbial Technology, India. Screening and Identication of Cellulase Producers Five microlitres of overnight grown culture was spot plated on CMC agar (0.2% NaNO3, 0.1% K2HPO4, 0.05% MgSO4, 0.05% KCl, 0.2% carboxymethylcellulose (CMC) sodium salt, 0.02% peptone, and 1.7% agar) (HiMedia, India). Plates incubated at 288C for 48 hours were ooded with 1% hexadecyltrimethyl ammonium bromide (HAB) for 30 to 40 minutes [6]. From cellulase-producing microorganisms, two potential bacterial strains RK3 (Gram ?ve) and MN34 (Gram ve) and one fungal strain RS2 were selected for identication and further studies. Genomic DNA from bacterial strains was isolated and amplied by using universal 16S rRNA primers [9], and fungal DNA was isolated and amplied by using internal transcribed spacer 1 (ITS 1) and internal transcribed spacer 4 (ITS 4) primers [15]. The amplied gene products were puried from agarose gel using Qiaquick Gel Extraction Kit (Qiagen, Germany). Nucleotide

sequencing of the genes was done by using Big Dye Terminator Cycle Sequencing Kit (Applied Biosystems) and 3130xl Genetic Analyzer (Applied Biosystems). The BLASTN program (http://www.ncbi.nlm.nih.gov/BLAST/; National Center for Biotechnology Information, Bethesda, MD) was used for homology searches with the standard program default. Comparison of Cellulase Screening Methods Screening of cellulase producers was done on CMC agar and CMC Congo red agar (0.05% K2HPO4, 0.025% MgSO4, 0.188% CMC sodium salt, 0.02% Congo red, 1.5% agar, 0.2% gelatin, and 10% soil extract). Five microlitres of cellulase-producing bacteria were spot plated on CMC agar in three sets and on CMC Congo red agar. The plates were incubated at 28 C for 48 hours. The rst set of plates was ooded with 1% HAB for 30 to 40 minutes [6]; the second set of plates was ooded with 0.1% Congo red for 15 to 20 minutes and then with 1 M NaCl for 15 to 20 minutes [14];

Fig. 1 Effect of HAB on the cellulolytic zone in CMC agar plates. (i) Uninoculated. (ii) Inoculated with Bacillus sp. RK3. (iii) Pseudomonas sp. MN34. (iv) S. sannanensis MTCC 6637. (v) P. chrysogenum RS2

Fig. 2 Effect of Congo red and NaCl on the cellulolytic zone in CMC agar plates. (i) Uninoculated. (ii) Inoculated with Bacillus sp. RK3. (iii) Pseudomonas sp. MN34. (iv) S. sannanensis MTCC 6637. (v) P. chrysogenum RS2

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and the third set of plates was ooded with Grams iodine (2.0 g KI and 1.0 g iodine in 300 ml distilled water) for 3 to 5 minutes (new method). After incubation, CMC Congo red plates were also observed for zone of clearance around the colony [7]. In another set of experiments, the standard cellulase from Aspergillus niger was used (Sigma-Aldrich) for validation of results. Ten microlitres of enzyme solution (10 mg/mL) was poured into the wells in CMC plates, which were made with a gel cutter, and the plates were incubated for 24 hours at 288C and ooded individually with 1% HAB for 30 to 40 minutes, 0.1% Congo red for 15 to 20 minutes, followed by 1 M NaCl for 15 to 20 minutes, and Grams iodine for 3 to 5 minutes.

Results and Discussion The two bacterial isolates producing cellulase were identied as Bacillus sp. RK3 (AM943531) and Pseudomonas sp. MN34 (AM992885) based on partial 16S rRNA gene

sequencing. The cellulase-producing fungal-isolate strain RS2 was identied as Penicillium chrysogenum RS2 (AM948960) by sequencing of its ITS15.8SITS2 region [15]. These three cultures and one actinomycete S. sannanensis MTCC 6637 were used for further studies. The observation on the development of cellulose clearance zone showed Grams iodine to be more effective compared with HAB, and Congo red plus 1 M NaCl for screening and qualitative estimation of cellulase production by microorganisms on CMC agar plates. The plates ooded with HAB or with Congo red plus 1 M NaCl as well as the CMC Congo red plates showed low intensity of clearance zone (Figs. 1 and 2). There was difculty in differentiating the enzyme-lysed zone from the CMC-containing area in the plates ooded with these reagents. Moreover, there was a waiting period of at least 30 to 40 minutes for the development of clearance zones [6, 14]. Interestingly, the plates ooded with Grams iodine showed distinct, clear, and prominent zones of clearance around the colonies showing cellulase production with bluish-black colouration in the

Fig. 3 Effect of Grams iodine on cellulolytic zone in CMC agar plates. (i) Uninoculated. (ii) Inoculated with Bacillus sp. RK3. (iii) Pseudomonas sp. MN34. (iv) S. sannanensis MTCC 6637. (v) Penicillium chrysogenum RS2

Fig. 4 Cellulase production in CMC Congo red agar plates. (i) Uninoculated. (ii) Inoculated with Bacillus sp. RK3. (iii) Pseudomonas sp. MN34. (iv) S. sannanensis MTCC 6637. (v) Penicillium chrysogenum RS2

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506 Fig. 5 Detection of cellulase activity for standard cellulase from A. niger. Carboxymethylcellulose agar plates were inoculated with 10 ll cellulase and after 24 hours ooded with (i) HAB, (ii) Congo red and NaCl, and (iii) Grams iodine

R. C. Kasana et al.: Rapid Method for Screening Cellulases

nonhydrolysed part of the medium (Fig. 3). It took only 3 to 5 minutes for the development of clearance zones after ooding. The plates with Congo red added to the medium before inoculation also showed low intensity for zone of clearance (Fig. 4). Moreover, Congo red (Direct Red 28 CI 22120, empiric formula C32H22N6O6S2Na2) is a benzidine-based dye and expected to metabolize to benzidine, which is a known carcinogen [10, 13]. There is a possibility that the added Congo red could have affected growth and cellulase production by the isolates because of its harmful effects. However, a sharp increase in the colour contrast of the hydrolyzed zone and nonhydrolysed portion of the medium is obtained on ooding with Grams iodine because it further enhanced the appearance of already sharply discernible clearance zone by producing bluishblack complex with cellulose (polysaccharide) and not with the glucose (monosaccharide). This new method for assaying has the double advantage of being quick as well as based on nontoxic chemicals. Furthermore, the method was also validated by using the standard cellulase form A. niger (Fig. 5). It was observed that plates ooded with Gram iodine after incubation also showed distinct, clear, and prominent zone in 3 to 5 minutes, whereas the plates ooded with HAB or with Congo red plus 1 M NaCl showed hazy zones after 30 to 40 minutes of incubation. The new method worked well with bacteria, actinomycetes, and fungi; hence, it can be employed for screening a large number of microorganisms with greater throughput.

Acknowledgments The authors are grateful to P. S. Ahuja, Director, Institute of Himalayan Bioresource Technology (CSIR), Palampur, India, for providing the necessary laboratory facility. The Council of Scientic and Industrial Research (CSIR) is also acknowledged for providing nancial support under the project NWP06. This is IHBT communication No. 0839.

References
1. Beguin P, Anbert JP (1993) The biological degradation of cellulose. FEMS Microbiol Rev 13:2558 2. Bhat MK (2000) Cellulases and related enzymes in biotechnology. Biotechnol Adv 18:355383 3. Camassola M, Dillon AJP (2007) Production of cellulases and hemicellulases by Penicillium echinulatum grown on pretreated sugar cane bagasse and wheat bran in solid-state fermentation. J Appl Microbiol 103:21962204 4. Coughlan MP (1985) The production of fungal and bacterial cellulases with comment on their production and application. Biotechnol Genet Eng Rev 13:39109 5. Gusakov AV, Berlin AG, Popova NN, Okunev ON, Sinitsyn AO, Sinitsyn AP (2000) A comparative study of different cellulase preparations in the enzymatic treatment of cotton fabrics. Appl Biochem Biotechnol 88:119126 6. Hankin L, Anagnostakis S (1977) Solid media containing carboxy methyl cellulose to detect CM cellulase activity of microorganisms. J Gen Microbiol 98:109115 7. Hendricks CW, Doyle JD, Hugley B (1995) A new solid medium for enumerating cellulose-utilizing bacteria in soil. Appl Environ Microbiol 61:20162019 8. Ito S (1997) Alkaline cellulases from alkaliphilic Bacillus: Enzymatic properties, genetics and application to detergents. Extremophiles 1:6166 9. Kasana RC, Sharma UK, Sharma N, Sinha AK (2007) Isolation and identication of a novel strain of Pseudomonas chlororaphis capable of transforming isoeugenol to vanillin. Curr Microbiol 54:457461 10. Lamb J, Loy T (2005) Seeing red: The use of Congo Red dye to identify cooked and damaged starch grains in archaeological residues. J Archaeol Sci 32:14331440 11. Mandels M (1985) Applications of cellulases. Biochem Soc Trans 13:414415 12. Park J, Park K (2001) Improvement of the physical properties of reprocessed paper by using biological treatment with modied cellulase. Bioresour Technol 79:9194 13. Tanaka K, Mii T, Marui S, Matsubara I, Igaki H (1981) Mutagenicity of urinary metabolites of benzidine and benzidine-based azo dyes. Int Arch Occup Environ Health 49:177185 14. Teather RM, Wood PJ (1982) Use of Congo red polysaccharide interactions complex formation between Congo red and

Conclusion The present studies showed that the use of Grams iodine remarkably enhances the sharpness of the clearance zone, making the process for screening cellulase-producing microorganisms easy, efcient, and rapid. Although the new method is a qualitative assay, the greatest advantage lies in its simplicity, quickness of performance, and effectiveness for screening a large number of microorganisms. Moreover, it avoids the use of toxic chemicals.

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R. C. Kasana et al.: Rapid Method for Screening Cellulases polysaccharide in detection and assay of polysaccharide hydrolases. Methods Enzymol 160:5974 15. White TJ, Bruns T, Lee S, Taylor J (1990) Amplication and direct sequencing of fungal ribosomal RNA genes for

507 phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols: a guide to methods and applications. Academic, New York, NY, pp 315322

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