November 28 - 30, 2013 IISc, Bangalore

FREDERICK SANGER'S DAY - THURSDAY, NOVEMBER 28, 2013

08:00 am - 09:00 am 09:00 am - 09:15 am 09:15 am - 10:00 am Registration Welcome and Opening Remarks by Prof. P. Balaram, Director, IISc, Bangalore Plenary Talk by Prof. Samir K. Brahmachari, DG CSIR, New Delhi

Session I: Infectious Diseases | Chair: Prof. D.N. Rao and Prof. Deepshikha Chakraborty, IISc
10:00 am - 10:30 am 10:30 am - 11:00 am 11:00 am - 11:30 am 11:30 am - 12:00 noon 12:00 noon - 12:30 pm Prof. Sandhya S. Visweswariah Prof. Vijaya Lakshmi Prof. Christian Doerig Dr. T.S. Keshava Prasad Kinomics and phosphoproteomics of malaria parasites: Insights into the biology of a divergent eukaryote Proteogenomic anlysis of Indian Vector of malaria, Anapheles stephensi Tea Break Protein Lysine Acetylation in Mycobacteria: the cAMP connection Proteomic characterization of Mycobacterium tuberculosis purified protein derivative (PPD) using LC-MS/MS Proteome analysis identify a hemozoin formation complex & novel secretary proteins in Plasmodium falciparum at asexual blood stages Lunch/Poster/Coffee

12:30 pm - 01:00 pm 01:00 pm - 03:00 pm

Prof. Pawan Malhotra

Session II: Pathophysiology & Drug Discovery | Chair: Prof. H.S. Savithri, IISc & Prof. Shantanu Sengupta, IGIB
03:00 pm - 03:30 pm 03:30 pm - 04:00 pm 04:00 pm - 04:15 pm 04:15 pm - 04:30 pm 04:30 pm - 05:00 pm 05:00 pm - 05:30 pm Prof. Satish Rao Prof. Kumar Somasundaram Dr. Marcus Macht Bruker Dr. Ravi K. Krovidi Agilent Technologies Prof. Akhilesh Pandey Prof. K. Dharmalingam Urine Exosome Paradigm of Kidney Failure: Clinical Utility of Exosome Proteomics Understanding glioblastoma through proteomic approaches Comprehensive characterization of biopharmaceuticals by MALDI and ESI mass spectrometry Targeted Phosphoproteomics Analysis of Immunoaffinity Enriched Tyrosine Phosphorylation in Mouse Tissues Unravelling breast cancer signalling pathways using phosphoproteomics Application of Proteomics to understand eye diseases

05:30 pm - 06:30 pm 06:30 pm - 07:00 pm 07:00 pm - 08:00 pm 08:00 pm onwards

Panel discussion: Application of Mass-spectrometry in Medical Research Chair: Dr. Krishnaswamy, Prof. Ravi Sirdeshmukh, Prof. Satish Rao and Dr. Surekha Zingde Tea Break Executive Council (EC) Meeting / Cultural Event for rest of the audience Dinner

November 28 - 30, 2013 IISc, Bangalore

JAMES ROTHMAN'S DAY - FRIDAY, NOVEMBER 29, 2013

Session I: Cell Signalling & Gene Regulation | Chair: Prof. K.P. Gopinath, IISc and Prof. Ramaswamy S, NCBS
09:00 am - 09:30 am 09:30 am - 10:00 am Prof. Didier Picard Prof. Rakesh Mishra The impacts of inhibiting a major proteome hub, The molecular chaperone Hsp90
Comparative proteomics of nuclear matrix and mitotic chromosome scaffold: structural basis of epigenetic cellular memory

10:00 am - 10:30 am

Prof. Tapas K. Kundu

Chromatin Meets Cancer: Role of Multifunctional Non-histone Chromatin Protein PC4 in Genome Organization and Breast Cancer Manifestation Understanding the Mechanism of Thyroid Hormone De-iodination by Liquid Chromatography and Mass Spectrometry Tea Break

10:30 am - 11:00 am 11:00 am - 11:30 am

Prof. G. Mugesh

Session II: Ecological Sciences | Chair: Prof. Ramasarma, IISc and Prof. Abhijit Chakrabarti, SINP
11:30 am - 11:45 am 11:45 am - 12:15 pm 12:15 pm - 12:45 pm 12:45 pm - 01:00 pm 01:00 pm - 03:00 pm Dr. Michael A. Blank Thermo-scientific Dr. Kannan Rangiah Prof. Renee M. Borges Dr. Akhilesh Pandey New Strategies for Higher Multiplexing and PTM Modification, Enrichment, Quantitation with isobaric labelling Quantitative metabolomics: Understanding the Role of neurotransmitters in Planarian Regeneration The volatilome of a nursery for seeds and wasps: how and why scents change From cells to organisms - Using SILAC and SILAM for quantitative proteomics Lunch/Poster/Coffee

Session III: Neurobiology | Chair: Prof. Saumitra Das, IISc and Prof. Surekha Zingde, ACTREC
03:00 pm - 03:30 pm Dr. Srinivas Bharath Dr. Stefan Tenzer Johannes Gutenberg University of Mainz (Waters) Dr. Mohammed Idris Dr. Jean-Baptiste Vincendet, AB Sciex Dr. Axel Brockmann
Mitochondrial changes and oxidative damage in a mouse model of muscle degeneration: Implications for neuromuscular disorders

03:30 pm - 04:00 pm

Label-free quantification of complex proteomes using ion-mobility enhanced data-independent acquisition Bio-mechanism of Epimorphic regeneration SWATHT Data Independent Acquisition: A game Changer for Proteomic Research and Biology Neuropeptidomics and Honeybee Behaviour Tea Break General Body Meeting (GBM)

04:00 pm - 04:30 pm 04:30 pm - 05:00 pm 05:00 pm - 05:30 pm 05:30 pm - 06:00 pm 06:00 pm - 07:00 pm

November 28 - 30, 2013 IISc, Bangalore

KOICHI TANAKA'S DAY - SATURDAY, NOVEMBER 30, 2013

Session I: Clinical Proteomics | Chair: Dr. Krishnaswamy, KMC and Prof. P.N. Rangarajan, IISc
09:00 am - 09:30 am 09:30 am - 10:00 am 10:00 am - 10:30 am 10:30 am - 11:00 am 11:00 am - 11:30 am Prof. Kalpana Bhargava Dr. Mahesh J. Kulkarni Dr. Krishna R. Murthy Prof. Amit Mandal Survival at High Altitude: Insight into High Altitude Native Plasma Proteome Abundance matters: Low abundance of albumin is associated with increased plasma protein glycation Proteomic analysis of ocular tissues Mass spectrometry based analysis of hemoglobin variants using customized database Tea Break

Session II: Plant Proteomics | Chair: Prof. Appaji Rao and Prof. Usha Vijayraghavan, IISc
11:30 am - 12:00 noon 12:00 noon - 12:30 pm 12:30 pm - 01:00 pm 01:00 pm - 03:00 pm Dr. Subhra Chakraborty Prof. Y. Sreelakshmi Dr. Niranjan Chakraborty Quest for nutrient-responsive proteins and cellular networks in pants: A comparative proteomic approach Proteomic tools for understanding tomato fruit quality and shelf life
Proteomics Study of Stress response in the microsomal membrane of Chick pea (Cicer ariatinum L): Molecular basis of stress adaptation

Lunch/Coffee

Session III: Mass Spectrometry Applications | Chair: Prof. Dipankar Chatterji and Prof. K.R.K. Easwaran, IISc
03:00 pm - 03:30 pm 03:30 pm - 04:00 pm 04:00 pm - 04:30 pm 04:30 pm - 05:00 pm 05:00 pm - 05:30 pm 05:30 pm - 05:45 pm Prof. Jayant B. Udgaonkar Dr. Akshay Naik Dr. Mark A. McDowall Waters Prof. Siddhartha P. Sarma Dr. Suman Thakur Structural characterization of prion protein aggregation using HX-MS Nanoelectromechanical system for single molecule mass measurements An Integrated Strategy for Multi-Omics Analysis Employing Three Dimensions of Resolution Mass Spectrometric Analysis of Proteins and Peptide Natural Products High throughput quantitative proteomics and its application in biology and medicine

Valedictory

ACKNOWLEDGEMENTS
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