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*Département de pathologie et biologie cellulaire and Groupe de recherche sur le système nerveux central, Université de Montréal,
Montréal, QC, Canada
Department of Neurology and Neurosurgery, Montreal Neurological Institute, McGill University, Montréal, QC, Canada
àDepartment of Neurology and Neurosurgery, McGill University, and Centre for Research in Neuroscience, Montreal General
Hospital, Montréal, QC, Canada
§The Burnham Institute for Medical Research, La Jolla, CA, USA
phosphate-buffered saline (PBS; 0.9% NaCl in 50 mM PB, pH 7.4). strokes at 900 rpm in 20 mL of ice-cold sucrose/HEPES buffer
Transverse sections, 50 lm thick, were cut in ice-cooled PBS with a (0.32 M sucrose, 10 mM HEPES, pH 7.4) containing protease
vibratome. Sections were processed free-floating by pre-embedding inhibitors (complete EDTA-free; Roche, Manheim, Germany). The
immunoperoxidase and immunogold protocols. The protocol of nuclear material (P1) was discarded following centrifugation at
double-EphA4 and -VGLUT1 immunolabeling for electron micro- 1000 g during 10 min, and the supernatant (S1) was centrifuged again
scopy (EM) was slightly modified from the single labeling protocol at 12 000 g for 15 min. The new supernatant was discarded and the
described previously (Tremblay et al. 2007). After simultaneous pellet (P2) was re-suspended in 20 mL of ice-cold sucrose/HEPES
incubation with anti-EphA4 (Ab11; 1 : 500 dilution) and with anti- buffer and centrifuged again at 13 000 g for 15 min. The resulting
VGLUT1 (1 : 200 dilution) primary antibodies, for 48 h, at 21C, in pellet, constituting the synaptosomal fraction (P2¢) was re-suspended
a blocking solution of PBS containing 5% normal goat serum and in approximately 2 mL of sucrose/HEPES buffer.
0.5% gelatin, VGLUT1 was first detected with immunogold and Two milliliters of this P2¢ fraction were lysed osmotically in
then EphA4 with immunoperoxidase. For immunogold labeling, 20 mL of 10 mM HEPES buffer containing the protease inhibitors
sections were incubated overnight at 21C in goat anti-mouse IgGs and then homogenized by three up-and-down strokes at 2000 rpm
conjugated to 1 nm colloidal gold particles (AuroProbe One; and centrifuged at 33 000 g for 20 min. The pellet, representing the
Amersham Biosciences, Oakville, ON, Canada) in the same synaptosomal membrane fraction (LP1) was discarded, while the
blocking solution. The diameter of the immunogold particles was supernatant (LS1) was used for immunoisolation of vesicles, or
increased with a silver enhancement kit (IntenSE; Amersham centrifuged again at 260 000 g during 2 h, to obtain the crude
Biosciences) for 12–15 min at 21C. For immunoperoxidase vesicle fraction (LP2). The concentration of EphA4 in fraction LP2
labeling, the sections were incubated for 2 h at 21C in goat anti- was approximately 30% compared with that in the starting brain
rabbit IgGs conjugated to biotin (Jackson Immunoresearch, West homogenates or the purified synaptosome fraction, P2¢ (see Bouvier
Grove, PA, USA) and with streptavidin–horseradish peroxidase et al. 2008).
(Jackson Immunoresearch) for 1 h in blocking solution. Afterwards,
labeling was revealed with 0.05% diaminobenzidine and 0.01% Linear sucrose density gradient of crude vesicle fraction
hydrogen peroxide in Tris/HCl-buffered saline (50 mM, pH 7.4). The crude vesicle fraction, LP2, was re-suspended in 3 mL of
Sections were post-fixed flat in 1% osmium tetroxide, embedded sucrose/HEPES buffer (0.04 M sucrose, 10 mM HEPES, pH 7.4).
in resin (Durcupan ACM; Sigma, St Louis, MO, USA), and The fraction was homogenized (three strokes at 900 rpm) followed
mounted between ACLAR embedding film (EMS, Hatfield, PA, by repeated trituration through 22½ and 27½ gauge needles and
USA). Small pieces of the latero-ventral hippocampus (CA1 layered on top of a 37 mL linear sucrose density gradient ranging
pyramidal cell layer and stratum radiatum) and dentate gyrus from 10 to 35% of sucrose solution. The gradient was centrifuged at
polymorphic layer were excised from the embedding film, re- 120 000 g during 4 h using a SW 28 rotor (Beckmann). Sixteen
embedded at the tip of resin blocks, sectioned (70–80 nm-thick) 2.5 mL aliquot fractions were collected from the top (fraction 1) to
with an ultramicrotome (Ultracut S, Leica Canada, St-Laurent, the bottom of the tube (fraction 16). Equal volumes of each fraction
Québec, Canada), collected on bare square-mesh copper grids, (80 lL) were added to 2· loading buffer and loaded on a SDS gel
stained with lead citrate and examined at 60 kV with a Philips for western blotting.
CM100 electron microscope.
For dissociated hippocampal cell cultures, coverslips (see below) Isolation of CCVs
were treated (or untreated) for 5 min with 0.1% Triton X-100 in The isolation of CCVs from rat adult brain was performed as
PBS, rinsed thrice with PBS, and blocked during 1 h with a described (Girard et al. 2005a), in two separate experiments. The
solution of 5% normal donkey serum and 0.5% gelatin in PBS, at preparations were immunoblotted for EphA4, clathrin heavy chain
21C. They were incubated for 72 h with or without the (CHC) and clathrin light chain proteins and for the sodium channel
monoclonal anti-EphA4 antibody (BD Bioscience, 1 : 500 dilution Nav1.2.
in blocking solution), at 4C. The EphA4 immunoreactivity was
detected using protein-A labeled with 10 nm gold particles Isolation of synaptic vesicles
(Bendayan 1984). Cultures were post-fixed in 1% osmium tetroxide A highly purified fraction of synaptic vesicles was prepared as
containing 15% K-ferricyanide, followed by uranyl ‘en bloc’ described (Huttner et al. 1983). Briefly, a fraction corresponding to
staining. The next day, they were dehydrated in ethanol, embedded LP2, above, was layered on top of a 50–800 mM continuous sucrose
in Epon resin (Mecalab, Montréal, Québec, Canada), and mounted gradient and centrifuged at 65 000 g for 5 h. The band of material at
between ACLAR embedding film. Ultrathin sectioning and further the 200–400 mM region, enriched in vesicles, was collected and
processing was done as above. constituted the sucrose gradient–vesicular fraction. A further
purification step involved permeation chromatography using glyc-
LS1 and LP2 subcellular fractionation of mouse forebrain/ eryl-coated controlled-pore glass beads (mean pore diameter of
midbrain 3000 Å), to obtain a controlled-pore glass vesicular fraction (SV) of
Subcellular fractions were prepared from adult mouse forebrain/ pure synaptic vesicles (see Huttner et al. 1983).
midbrain (two for each of three experiments), as described (see
supplementary material in Zhou et al. 2007). Briefly, the forebrain/ Immunoisolation of specific types of synaptic vesicles
midbrain was dissected out on ice, following a transverse cut between The following experiments were repeated thrice. Magnetic beads
the occipital cortex and cerebellum. All subsequent steps were carried (107) with pre-coupled immunoglobulins (Dynabeads M-280
out at 0–4C. Brain tissues were homogenized by 9 up-and-down sheep anti-rabbit or anti-mouse IgG; Dynal, Invitrogen, Oslo,
Norway), were washed thrice with PBS and incubated overnight Immunofluorescence was viewed and captured by a fluorescence
with the primary rabbit polyclonal or monoclonal antibodies microscope (Karl Zeiss, Axiophot, Germany) equipped with a
(3 lg of each), or rabbit or mouse control immunoglobulins digital CCD camera (Qimaging, Surrey, BC, Canada). In three
(Chromopur rabbit or mouse IgG, Jackson Immunoresearch experiments, measurement of cell surface EphA4 immunofluores-
Laboratories, West Grove, PA, USA), in PBS containing 1% cence was carried out with Northern Eclipse Imaging V.6 software
bovine serum albumin (BSA). The LS1 supernatant (0.4 lg of (Empix Imaging, Missisauga, ON, Canada), on 25 frames covering
protein per lL) was used as immunoisolation buffer (Ii buffer) each 21 000 lm2 for each condition (control vs. KCl treatment).
consisting of LS1 fraction, 50 mM Tris HCl at pH 7.4, 50 mM Unstimulated and KCl-treated cultures were analyzed under the
KCl, 20 mM MgCl2, 0.2 M sucrose and protease inhibitors same image exposure, with the same threshold values. The analysis
(complete EDTA-free; Roche). The antibody-coupled beads were was performed in three cultures for each condition. All granular
washed thrice with PBS/BSA 1%. One milliliter of the Ii buffer/ spots of labeling were treated as individual objects for the following
BSA 1% was added to the pre-coupled beads for each measurements: object count, selected area, total object area, percent
immunoisolation and incubated for 1 h 45 min. The beads were object area and total gray. Optical density was the result of the gray
then washed four times with PBS and re-suspended in 25 lL of value of the spot multiplied by its area and divided by the total area
loading buffer (Bio-Rad, Hercules, CA, USA), heated at 95C for of the frame.
5 min, for standard sodium dodecyl sulfate–polyacrylamide gel
electrophoresis and western blotting. The amount of LS1 that was
loaded in these gels corresponded to 10 lg of protein. Results
(b)
(a) (e)
(b)
(c)
(d)
Fig. 4 Immuno-isolation of synaptic and piccolo–bassoon transport vesicles with Triton X-100, was negative for EphA4, indicating that
vesicles from the LS1 fraction (0.4 lg/mL of LS1 were used for each EphA4 and VGLUT1 are colocalized in the same vesicles, but not in
immunoisolation). (a) SVs were immuno-isolated with an anti-synapt- strong physical association. (c) Immuno-isolation of GABAergic SVs
ophysin antibody (Syn-Ii). In this and the following blots, the amount of (VGAT-Ii) and immunoprecipitation of VGAT (VGAT-IP) gave results
LS1 fraction loaded in the gels corresponded to 10 lg of protein. The similar to VGLUT1, showing that EphA4 is present in these vesicles
same procedure with control non-specific immunoglobulins (Ctl IgG) but does not interact strongly with VGAT. These results were repeated
gave no staining for EphA4 or synaptophysin, whereas the immuno- in three separate experiments. (d) Piccolo–bassoon transport vesicles
isolation of vesicles with synaptophysin was positive for both EphA4 (PTVs) were immuno-isolated with an anti-piccolo antibody (Pic). The
and synaptophysin. (b) Immuno-isolation of glutamatergic SVs western blot of immuno-isolated PTVs was negative for EphA4. (e)
(VGLUT1-Ii) and immunoprecipitation of VGLUT1 (VGLUT1-IP) using Control staining of the VGLUT1 and VGAT immuno-isolates. Following
an anti-VGLUT1 antibody. The western blot of vesicles treated with the immuno-isolation of vesicles with VGLUT1 (top pictures), the blots are
control IgGs was negative for EphA4 and synaptophysin, but showed strongly reactive with the anti-VGLUT1 antibody, but negative with the
a spot at the level of VGLUT1 (50 KDa) that is likely attributable to anti-VGAT antibody. The immuno-isolation of vesicles with VGAT
the IgGs. The immuno-isolation with the VGLUT antibody was positive (bottom pictures) yielded a fainter signal in VGAT western blotting, and
for EphA4 and synaptophysin (confirming the success of the immu- a comparable detection of the same spot of VGAT with the VGLUT
noisolation of SVs), while the spot corresponding to VGLUT1 was antibody. Thus, there was no detectable cross-isolation of the vesi-
strongly increased, also confirming the success of the immuno-isola- cles, but the VGLUT1 antibody showed some cross-reactivity with
tion. The immunoprecipitation of VGLUT1, following treatment of the VGAT in western blotting.
EphA4 colocalizes with VGLUT1 and VGAT in cultured immunostained elements were less abundant, representing
hippocampal neurons roughly one third of the VGLUT1 immunofluorescent
Following immunofluorescence for EphA4, cultured hippo- punctae. Moreover, their distribution differed to some extent,
campal neurons at DIV15 displayed a punctate labeling for with VGAT terminals being much more frequently surround-
EphA4 along their neurites, with a more diffuse staining over ing neuronal perikarya, as expected for these inhibitory
cell bodies (Fig. 5a,d). This staining pattern is consistent terminals (not shown). Spots of EphA4 immunofluorescence
with results from previous studies (Fu et al. 2007). The extensively colocalized with those of VGLUT1 (Fig. 5c) or
immunofluorescence of VGLUT1 or VGAT was also punc- VGAT (Fig. 5f). Nevertheless, VGLUT1 and VGAT were
tate, with granules of various sizes along neurites and cell detected in distinct nerve terminals, as shown following dual
bodies, consistent with the known pre-synaptic localization labeling for VGLUT1 and VGAT (Fig. 5g,h). The polyclonal
of these vesicular proteins (Fig. 5b,e). However, the VGAT anti-VGLUT1 antibody (used for dual immunofluorescence
with the monoclonal VGAT antibody) and the monoclonal cultures immunostained without Triton X-100. For profiles
anti-VGLUT1 antibody (used for dual immunostaining with from cultures immunostained in the presence of Triton
EphA4) gave total co-staining when used together, confirm- X-100, there was a mean of 27.4 ± 18.6 particles inside
ing the specificity of both anti-VGLUT1 antibodies (not versus 19.3 ± 12.6 on the plasma membrane (n = 36; ratio
shown). EphA4 thus colocalized with both VGLUT1 and inside/surface: 1.42). Moreover, many profiles in Triton-
VGAT in cultured neonatal hippocampal neurons, consistent treated cultures were labeled only on the surface (dendrites,
with an association with both subpopulations of SVs in vitro. axons), whereas most of those with many gold particles
Examination of such cultures in immunoelectron micro- inside were identified as axon terminals. These features are
scopy (immunogold with the BD Bioscience monoclonal consistent with EphA4 being mostly expressed on the
antibody recognizing the extracellular domain of EphA4), surface, in the plasma membrane, except for a strong
following the use of Triton X-100, showed gold particles on labeling of synaptic vesicles in axon terminals.
the plasma membrane of perikarya, dendrites and axons, as These observations confirm the presence of EphA4 in SVs
well as in nerve terminals, in close association with SVs of cultured hippocampal neurons as well as the cell surface
(Fig. S3a,b). However, when Triton X-100 was omitted restriction of the labeling when Triton X-100 is omitted
before incubation with the immunoreagents, the immunogold during the immunocytochemical procedure (see below).
labeling was restricted essentially to the plasma membrane of
the cells (Fig. S3c). Quantification of the gold particles The cell surface expression of EphA4 is regulated by
inside and on the surface of the cell profiles in EM gave neuronal activity in culture
1.8 ± 2.0 particles inside versus 13.5 ± 8.0 on the plasma The fractionation and microscopic observations constitute
membrane (n = 63; ratio inside/surface: 0.13) for profiles of strong evidence for the presence of EphA4 in SVs and
(a) (b)
CCVs. Therefore, we determined if the cell surface expres- These observations suggest that EphA4 is recruited to
sion of EphA4 was affected by neuronal depolarization. We the plasma membrane upon synaptic vesicle fusion with the
used KCl-induced depolarization to mimic synaptic activity, plasma membrane, following sustained neuronal depolarization.
followed by immunofluorescence on DIV15 hippocampal
cultures, in conditions similar to those used for immunogold
Discussion
in electron microscopy without Triton X-100 (Fig. S3c,
showing surface labeling). Control neurons and neurons We previously demonstrated that EphA4 is associated with
subjected to 2 min of depolarization with KCl displayed a pre-synaptic compartments including active zones and ves-
punctate cell surface immunofluorescence on perikarya and icles, in addition to being present in post-synaptic elements
neurites (Fig. 6). However, the immunofluorescence was such as dendritic spines and PSDs (Bouvier et al. 2008). In
very faint in control cultures (Fig. 6a,c,e), whereas the the present study, we have further investigated the associa-
intensity of this immunofluorescence increased markedly tion of EphA4 with SVs, PTVs and CCVs using cell
following KCl depolarization (Fig. 6b,d,f). This observation fractionation, immunoisolation of vesicles, and immunocy-
was repeated in six separate experiments carried out each tochemistry in confocal and electron microscopy. The results
time on 2–3 control versus KCl-treated cultures. Quantifica- demonstrate the presence of EphA4 in SVs and CCVs, a
tion of the fluorescent puncta on neurites was performed in novel observation for an Eph receptor.
three of these six experiments and showed a significant
increase in the mean optical density (fluorescence intensity of EphA4 is associated with various types of vesicles
individual puncta), mean surface area and number of puncta, Using electron microscopy and linear sucrose density
following KCl stimulation (Fig. 6g–i). gradient, we found that EphA4 is associated with various
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