Académique Documents
Professionnel Documents
Culture Documents
AbstractÐPyrimidine 1 0 -aza-C-nucleosides are synthesised by the fusion of 5-bromouracil, 5-bromocytosine and 5-bromoisocytosine with
(3R,4R)-4-(hydroxymethyl)pyrrolidin-3-ol in 40±41% yield. A homologue of 1 0 -aza-C-uridine is obtained in a Mannich reaction in 65%
yield by treatment of the azasugar, paraformaldehyde and uracil. N-Alkylation of (3R,4R)-4-(hydroxymethyl)pyrrolidin-3-ol with 6-chloro-
methyluracil gives the 6-regioisomeric homologue. (3R,4R)-4-(Hydroxymethyl)pyrrolidin-3-ol is synthesised in 25% overall yield from
diacetone-d-glucose via 3-C-(azidomethyl)-3-deoxy-d-allose which is subjected to an intramolecular reductive amino alkylation reaction to
give (3R,4S)-4-[(1S,2R)-1,2,3-trihydroxypropyl]pyrrolidin-3-ol followed by Fmoc protection, oxidative cleavage of the triol group with
further reduction of the obtained aldehyde and subsequent deprotection of the nitrogen atom. q 2001 Elsevier Science Ltd. All rights
reserved.
0040±4020/01/$ - see front matter q 2001 Elsevier Science Ltd. All rights reserved.
PII: S 0040-402 0(01)00920-6
9164 V. V. Filichev, E. B. Pedersen / Tetrahedron 57 (2001) 9163±9168
Scheme 1. Reagents and conditions: (a) (1) CrO3/Py/Ac2O/CH2Cl2, (2) CH3P(C6H5)3Br/n-BuLi/THF; (b) (1) BH3/THF, (2) NaOH/H2O2, (3) MsCl/Py;
(c) (CH3)2NH´´ ´HN3/DMF; (d) Amberlite IR-120(H1); (e) H2/200 psi/Pd±C/H2O; (f) FmocCl/dioxane/10% aq. NaHCO3; (g) (1) NaIO4, (2) NaBH4;
(h) NEt3/acetonitrile.
This paper describes the synthesis of several enantio- molecular reductive alkylation reactions.11 Multistep reac-
merically pure aza-C-nucleosides utilising a synthetic tions including multiple chromatographic puri®cations were
route for the required azasugar which is more easy and needed in order to obtain the amino precursor sugars and in
straightforward than the ones previously published.11 We the end low overall yields (maximum 11%) were obtained
have synthesized azasugar analogues of 2-deoxy-d-hexo- of the azasugars.
furanose and 2-deoxy-d-heptofuranose in a one-pot reaction
by a catalytic reduction reaction of amino group precursors
in aldosugars (3-C-cyano-3-deoxy-d-ribo-pentofuranose, 2. Results and discussion
3-C-azidomethyl-3-deoxy-d-ribo-pentofuranose and 3-deoxy-
3-C-nitromethyl-d-allose) followed by an in situ intra- We found it attractive to synthesise (3R,4R)-4-(hydroxy-
methyl)pyrrolidin-3-ol (12) through 3-C-azidomethyl-3-
deoxy-d-allose (8) starting from diacetone-d-glucose (4)
(Scheme 1).
4.1.2. 3-C-Azidomethyl-3-deoxy-d d-allofuranose (8). A The azasugar 12 and 5-bromopyrimidines were mixed in the
solution of azide 7 (7.8 g, 26.0 mmol), freshly washed molar ratio 3:1. The mixture was fused in a preheated oil
Amberlite IR-120(H1) (25 g) in H2O (100 mL) was heated bath at 145±1508C for 10 min. After cooling, the residue
at 608C for 3.5 h. After allowing the mixture to cool, the was puri®ed on a silica gel column with CH2Cl2/MeOH
resin was ®ltered off and the solvent was removed in vacuo. (0!25% MeOH) to afford the aza-C-nucleosides 13±15.
The residue was puri®ed by chromatography on a silica gel The excess of starting azasugar 12 was eluted with
column with 20% MeOH in CH2Cl2 to give 8 (4.0 g, 94%) MeOH/25% aq. NH3 (0!25%).
as a colourless oil: 1H NMR (Me2SO-d6) d 2.43 (m, 1H,
H-3), 3.40±3.56 (m, 4H, 4£OH), 3.86 (m, 2H, CH2N3), 4.41 4.2.1. 5-[(3R,4R)-3-Hydroxy-4-(hydroxymethyl)pyrro-
(t, J5.4 Hz, 1H, CHOH), 4.75 (d, J4.7 Hz, 1H, H-4), lidin-1-yl]uracil (13). Colorless powder, 40% yield, mp
4.98 (m, 2H, CH2OH), 5.21 (d, J4.4 Hz, 1H, H-2), 6.22 236±2398C (ethanol/few drops of H2O), Rf 0.11 (10%
(d, J4.4 Hz, 1H, H-1); 13C NMR (Me2SO-d6) d 44.5 (C-3), MeOH/CH2Cl2); n max (neat) 3417±2700 (br), 1745, 1665
48.0 (CH2N3), 63.4 (CH2OH), 75.0 (C-2), 75.4 (C-4), 79.6 cm21; 1H NMR (Me2SO-d6) d 2.06 (m, 1H, H-4 0 ), 2.78
(CHOH), 102.1 (C-1); FAB-MS: m/z 242 [M1Na]1; Anal. (dd, J5.8, 9.6 Hz, 1H, H-5 0 (b)), 2.88 (dd, J4.2,
Calcd for C7H13N3O5´0.75H2O (232.7): C, 36.14; H, 6.28; 10.2 Hz, 1H, H-2 0 (b)), 3.22 (m, 2H, CH2OH), 3.31 (m,
N, 18.06. Found: C, 36.38; H, 6.45; N, 18.00. 1H, H-2 0 (a)), 3.45 (m, 1H, H-5 0 (a)), 3.92 (t, J4.8 Hz,
V. V. Filichev, E. B. Pedersen / Tetrahedron 57 (2001) 9163±9168 9167
1H, H-3 0 ), 4.60 (t, J5.0 Hz, 1H, CH2OH), 4.88 (d, (CD3OD) d 2.20 (m, 2H, H-4 0 , H-5 0 (b)), 2.64 (m, 2H,
J4.7 Hz, 1H, 3 0 -OH), 6.43 (d, J2.6 Hz, 1H, H-6), H-2 0 ), 2.95 (t, J8.0 Hz, 1H, H-5 0 (a)), 3.38 (s, 2H, 6-
10.30 (s, 1H, NH), 10.95 (s, 1H, NH); 13C NMR (Me2SO- CH2N), 3.53 (m, 2H, CH2OH), 4.10 (m, 1H, H-3 0 ), 4.90
d6) d 49.0 (C-4 0 ), 51.7 (C-5 0 ), 57.8 (C-2 0 ), 61.8 (CH2OH), (br.s, 4H, 2£NH, 2£OH), 5.59 (s, 1H, H-5); 13C NMR
71.1 (C-3 0 ), 120.1 (C-5), 125.2 (C-6), 150.1 (C-2), (CD3OD) d 51.4 (C-4 0 ), 56.5 (C-5 0 ), 56.8 (C-2 0 ), 62.8
161.5 (C-4); HRMS: m/z (M1Na)1 found 250.0793, (CH2OH), 63.9 (6-CH2N), 74.3 (C-3 0 ), 99.7 (C-5), 153.5
C9H13N3O4Na requires 250.0798. (C-6), 156.0 (C-2), 167.2 (C-4); HRMS: m/z (M1H)1
found 242.1123, C10H16N4O3 requires 242.1135.
4.2.2. 5-[(3R,4R)-3-Hydroxy-4-(hydroxymethyl)pyrro-
lidin-1-yl]cytosine (14). Light-brown crystals, 41% yield, 4.2.6. (3R,4R)-3-Hydroxy-4-hydroxymethyl-N-(1,3,6-tri-
mp 1388C (EtOH/5% CH2Cl2), Rf 0.10 (30% MeOH/ methyluracil-6-yl)pyrrolidine (18). This compound was
CH2Cl2); n max (neat) 3352±2800, 1664 cm21; 1H NMR prepared by the same methodology as described for the
(Me2SO-d6) d 2.10 (m, 1H, H-4 0 ), 2.58 (dd, J5.4, synthesis of 17 using 1,3-dimethyluracil-6-ylmethyl
9.1 Hz, 1H, H-5 0 (b)), 2.69 (dd, J3.0, 9.3 Hz, 1H, H-2 0 chloride.21 Yield 83%, Rf 0.41 (20% MeOH/CH2Cl2); 1H
(b)), 2.96 (dd, J5.6, 9.6 Hz, 1H, H-2 0 (a)), 3.06 (t, J NMR (CDCl3) d 2.36 (m, 2H, H-4 0 , H-5 0 (b)), 2.65 (dd,
8.3 Hz, 1H, H-5 0 (a)), 3.40 (m, 2H, CH2OH), 3.90 (t, J J4.1, 9.7 Hz, 1H, H-2 0 (b)), 2.92 (m, 2H, H-2 0 , H-5 0
2.3 Hz, 1H, H-3 0 ), 4.60 (br.s, 1H, CH2OH), 4.90 (br.s, 1H, (a)), 3.34 (s, 3H, NCH3), 3.41 (s, 2H, 6-CH2N), 3.50 (s,
OH), 6.60 (br.s, 2H, NH2), 7.10 (s, 1H, H-6), 10.30 (br.s, 1H, 3H, NCH3), 3.65 (m, 4H, CH2OH, 2£OH), 4.24 (m, 1H,
NH); 13C NMR (Me2SO-d6) d 50.1 (C-4 0 ), 53.7 (C-5 0 ), 59.8 H-3 0 ), 5.80 (s, 1H, H-5); 13C NMR (CDCl3) d 27.9, 31.2
(C-2 0 ), 62.0 (CH2OH), 71.9 (C-3 0 ), 117.6 (C-5), 131.4 (C-6), (NCH3), 50.1 (C-4 0 ), 55.6 (C-5 0 ), 56.9 (C-2 0 ), 61.7
155.8 (C-2), 164.2 (C-4); HRMS: m/z (M1H)1 found (CH2OH), 63.8 (6-CH2N), 73.7 (C-3 0 ), 101.7 (C-5), 151.3
227.1121, C9H15N4O3 requires 227.1139. (C-6), 152.7 (C-2), 162.7 (C-4); HRMS: m/z (M1H)1 found
270.1440, C12H20N3O4 requires 270.1448.
4.2.3. 5-[(3R,4R)-3-Hydroxy-4-(hydroxymethyl)pyrro-
lidin-1-yl]isocytosine (15). Light-brown crystals, 41%
yield, mp 182±1838C (MeOH), Rf 0.06 (20% MeOH/
Acknowledgements
CH2Cl2); n max (neat) 3366±2800, 1647 cm21; 1H NMR
(Me2SO-d6) d 2.06 (m, 1H, H-4 0 ), 2.83 (dd, J5.8,
We thank Mr R. A. Zubarev and Mr B. A. Budnik for the
9.5 Hz, 1H, H-5 0 (b)), 2.92 (dd, J4.1, 9.8 Hz, 1H, H-2 0
high resolution mass spectra.
(b)), 3.20±3.52 (m, 4H, H-2 0 , H-5 0 (a), CH2OH), 3.90 (m,
1H, H-3 0 ), 4.80 (br.s, 2H, CH2OH, 3 0 -OH), 6.20 (br.s, 2H,
NH2), 6.68 (s, 1H, H-6), 6.95 (s, 1H, OH); 13C NMR
(Me2SO-d6) d 49.1 (C-4 0 ), 51.6 (C-5 0 ), 57.7 (C-2 0 ), 62.0 References
(CH2OH), 71.2 (C-3 0 ), 128.2 (C-5), 150.8 (C-6), 156.0
(C-2), 156.9 (C-4); HRMS: m/z (M1H)1 found 227.1139, 1. Davis, F. F.; Allen, F. W. J. Biol. Chem. 1957, 227, 907±915.
C9H15N4O3 requires 227.1135. 2. Watanabe, K. A. The Chemistry of C-Nucleosides. Chemistry
of Nucleosides and Nucleotides; Townsend, L. B., Ed.;
4.2.4. (3R,4R)-3-Hydroxy-4-hydroxymethyl-N-(5-ura- Plenum: New York, 1994; Vol. 3, p. 421.
cilylmethyl)pyrrolidine (16). The azasugar 12 (50 mg, 3. Bols, M. Acc. Chem. Res. 1998, 31, 1±8.
0.43 mmol), uracil (53 mg, 0.47 mmol) and paraformalde- 4. Ng, K. M. E.; Orgel, L. E. J. Med. Chem. 1989, 32, 1754±
hyde (15.4 mg, 0.51 mmol) in 20 mL EtOH were re¯uxed 1757.
for 24 h. Solvent was evaporated under diminished pressure. 5. Harnden, M. R.; Jarvest, R. L. Tetrahedron Lett. 1991, 32,
The residue was puri®ed on a silica gel column with 3863±3866.
CH2Cl2/MeOH (10!50% MeOH) to afford compound 16 6. Lee, Y. H.; Kim, H. K.; Youn, I. K.; Chae, Y. B. Bioorg. Med.
(67 mg, 65%) as an oil: Rf 0.63 (aq. 25% NH3 /1,4-dioxane: Chem. Lett. 1991, 1, 287±290.
50/50); 1H NMR (CD3OD) d 2.20 (m, 1H, H-4 0 ), 2.38 (m, 7. Jaeger, E.; Biel, J. H. J. Org. Chem. 1965, 30, 740±744.
1H, H-5 0 (b)), 2.70 (m, 2H, H-2 0 ), 2.95 (t, J8.5 Hz, 1H, 8. Sùrensen, M. D.; Khalifa, N. M.; Pedersen, E. B. Synthesis
H-5 0 (a)), 3.35 (s, 2H, 5-CH2N), 3.60 (m, 2H, CH2OH), 4.05 1999, 1937±1943.
(m, 1H, H-3 0 ), 4.95 (br.s, 4H, 2£NH, 2£OH), 7.44 (s, 1H, 9. Phillips, A. P. J. Am. Chem. Soc. 1951, 73, 1061±1062.
H-6); 13C NMR (CD3OD) d 51.5 (C-4 0 ), 51.4 (C-5 0 ), 56.8 10. Bols, M.; Hansen, S. U. Acta Chem. Scand. 1998, 52, 1214±
(C-2 0 ), 62.6 (CH2OH), 64.0 (5-CH2N), 74.1 (C-3 0 ), 110.5 1222.
(C-5), 142.7 (C-6), 153.7 (C-2), 166.7 (C-4); HRMS: m/z 11. Filichev, V. V.; Brandt, M.; Pedersen, E. B. Carbohydr. Res.
(M1H)1 found 242.1123, C10H16N4O3 requires 242.1150. 2001, 333, 115±122.
12. Garegg, P. J.; Samuelsson, B. Carbohydr. Res. 1978, 67, 267±
4.2.5. (3R,4R)-3-Hydroxy-4-hydroxymethyl-N-(6-ura- 270.
cilylmethyl)pyrrolidine (17). The azasugar 12 (144 mg, 13. Acton, E. M.; Goerner, R. N.; Uh, H. S.; Ryan, K. J.; Henry,
1.23 mmol) was dissolved in 1 mL (i-Pr)2EtN and 2.5 mL D. W. J. Med. Chem. 1979, 22, 518±525.
MeOH and 6-uracilylmethylchloride (237 mg, 1.48 mmol) 14. Huang, B-G.; Bobek, M. Carbohydr. Res. 1998, 308, 319±
was added. The mixture was stirred at rt for three days. The 328.
solvent was removed in vacuo and the residue was puri®ed 15. Titova, I. E.; Poplavskii, V. S.; Koldobskii, G. I.; Nikolaev,
using silica gel column chromatography with CH2Cl2/ V. D.; Erussalimsky, G. B. Khim. Geterotsikl. Soed. 1986,
MeOH (0!10% MeOH) to afford compound 17 (140 mg, 1086±1089.
50%) as an oil: Rf 0.35 (20% MeOH/CH2Cl2); 1H NMR 16. Phillips, A. P. J. Am. Chem. Soc. 1953, 75, 4092.
9168 V. V. Filichev, E. B. Pedersen / Tetrahedron 57 (2001) 9163±9168
17. Fukuhara, T. K.; Visser, D. W. J. Am. Chem. Soc. 1955, 77, 20. Hirota, K.; Watanabe, K. A.; Fox, J. J. J. Org. Chem. 1978, 43,
2393±2395. 1193±1197.
18. Advanced Chemistry Development Inc., Toronto, Canada. 21. Crozet, M. P.; Gellis, A.; Pasquier, C.; Vanelle, P.; Aune, J-P.
19. Motawia, M. S.; Jùrgensen, P. T.; Larnkjñr, A.; Pedersen, Tetrahedron Lett. 1995, 36, 525±528.
E. B.; Nielsen, C. Monatsh. Chem. 1993, 124, 55±64.