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Introduction
Naturally occurring 2-pyrones
Bufadienolides
Fusapyrones and 4-hydroxy-2-pyrones
Gibepyrones
Herbarins A and B
6-Alkyl-2-pyrones
Peripyrones
Coumarins
Styrylpyrones
Others
Isolation and structure elucidation
Biological activity
HIV inhibitors
Treatment of Alzheimers disease
Treatment of high cholesterol
Treatment of cancer
Other uses
Future lead compounds and directions
References
1 Introduction
2-Pyrone 1a is a six-membered cyclic unsaturated ester that
shares chemical and physical properties reminiscent of alkene
and aromatic compounds. It is highly abundant in bacteria,
microbial, plant, insect and animal systems and takes part in
many different types of biological processes such as defence
against other organisms, as key biosynthetic intermediates, and
as metabolites. Historically, simple 2-pyrones such as triacetic
acid lactone 1b and tetraacetic acid lactone 1c, are used as
precursors for the synthesis of biologically important compounds such as pheromones,1 solanopyrones,2 a-chymotrypsin,3
elastase,4 coumarins5 and analogues.6
Gerard McGlacken received his B.Sc. (Hons.) and Ph.D. from the National University of Ireland, Galway,
where he studied the asymmetric deprotonation of hydrazones under the supervision of Dr S. W. Breeden. He
is currently carrying out postdoctoral research with Dr I. J. S. Fairlamb at the University of York in England,
studying asymmetric Ru-catalysed cycloisomerisation reactions of 1,6-enynes and 1,6-dienes. Further interests
include the synthesis of substituted 2-pyrones using Pd-catalysed coupling reactions, and the investigation of
unusual observations associated with this class of substrates.
DOI: 10.1039/b416651p
Gerard P. McGlacken
Ian Fairlamb (born 1975, UK) was appointed to a lectureship in Organic Chemistry at York in late 2001,
following a successful Ph.D. under the guidance of Dr J. Dickinson investigating the rational design and
synthesis of squalene synthase inhibitors (1999), and a productive post-doctoral research stay with Professor
G. C. Lloyd-Jones, studying the mechanisms of various Pd-catalysed processes (200001). At the age of 28,
he was awarded the prestigious 2003 Meldola Medal and Prize by the Royal Society of Chemistry (awarded
in 2004) to recognise outstanding independent contributions in the application of transition metal catalysed
reactions, particularly involving palladium, to the synthesis of medicinally relevant molecules and natural
products. He is a recipient of a Royal Society University Research Fellowship (started October 2004) for
Understanding, controlling and exploiting unusual observations in Pd-catalysed reactions. Research is
broadly at the interface between Organic, Inorganic and Medicinal/Biological Chemistry. Key areas involve
transition metal chemistry, catalyst design (chiral and achiral), mechanistic understanding, with strong links
to medicinal chemistry and drug discovery; utilisation of palladium chemistry in pharmaceutical design,
particularly in the preparation of novel heterocyclic compounds such as 2-pyrones and related thio-derivatives,
and pyridines. The complexation of 2-pyrones and 2-pyridinones to a variety of transition metal moieties are
studied. Novel compounds are screened for interesting biological effects. The exploitation of medicinal lead
compounds possessing anti-cancer and carbon monoxide releasing properties is of interest to the research
group.
Ian J. S. Fairlamb
This journal is
369
2.3
Gibepyrones
2.4
Herbarins A and B
2.5
6-Alkyl-2-pyrones
371
2.7
2.6 Peripyrones
Aspergillus fumigatus FO-1289 was isolated from a soil sample from Tokyo (Japan). Four biologically active compounds,
pyripyropenes AD (30ad), sharing structural similarities
namely pyridine, 2-pyrone and sesquiterpene moieties, forming
a steroid-like structure, were isolated from the culture broth
of the producing strain.48,49 These demonstrated potent acylCoA:cholesterol acyltransferase (ACAT) inhibitory activity.
Pyripyropene C 30c was the most potent in screens with an
enzyme assay system using rat liver microsomes (IC50 = 53 nM).
The initial reports describing the isolation and biological
evaluation of 30ad were followed by relative and absolute
372
Coumarins
2.8 Styrylpyrones
2.9 Others
The carboxylic acid 44 was isolated from the aspen blue stain
fungus Ophiostoma crassivaginata, along with fteen other compounds. A series of biologically active secondary metabolites,
373
NF00659
R1
R2
A1 , 52a
A2 , 52b
A3 , 52c
B1 , 52d
B2 , 52e
I
II
Ac
I
II
OH
OH
OH
H
H
375
39, 100 and 59% at 50 lg ml1 in the case of the n-hexane, ethyl
acetate (defatted organic layer) and aqueous layer, respectively.
Repeated chromatographic fractionation of the most active ethyl
acetate layer afforded compounds 92, 93 and 94 in 0.23, 0.19 and
0.057% yields, respectively. The 1 H and 13 C data of compound 92
were similar to those of 93.95 New NMR signals corresponding
to the acetoxy group at d 2.08 (s, 3H), d 20.9 (q, 1C) and d 170.8
(s, 1C), along with downeld shifts of C-11 and H-11, due to
added deshielding from the ester group, allowed the structure of
92 to be assigned (atom numbering as in original paper). The
structure was conrmed by acetylation of 2-pyrones 92 and 93.
Both gave an identical doubly acetylated derivative 96. NOE
contacts were observed between H-7 and H-11 (9%) and H-7
and H3 -9 (5%).
4
4.1
Biological activity
HIV inhibitors
Tummino in his studies found that 102 was the most potent
warfarin analogue. Coumarin 99 was the initial lead compound.
X-Ray crystallographic studies illustrated that this compound
was bound to HIV PR through two possible binding modes.
In each mode, the 4-hydroxycoumarin ring of the inhibitor
displaced two water molecules. The fused phenyl ring was
orientated in the S1 site. In one mode, the exible side chain
orientated itself towards Arg 108 in the S3 region, while in
the other it folded back towards the S2 region. Structural
modication led to a marked improvement in inhibitory activity.
For example, the IC50 value of 103 is 0.52 lM.137,138
4-Hydroxy-2-pyrones have become one of the most important
classes of anti-HIV agents.135 In the late 1990s, a move to
discover cyclic non-peptide HIV protease inhibitors capable of
displacing the active site structural water molecule took place.139
The reorganization following water removal can lead to smaller
and potentially more potent inhibitors.
High resolution X-ray diffraction studies on linear inhibitors
with HIV PR-1 have shown the presence of a tetra-coordinated
structural water molecule linking the inhibitor to the aps
of the HIV PR dimer.140,141 The detailed relevance of this water
molecule is beyond the scope of this review.142,143 4-Hydroxy-2pyrones can replace the water molecule found in the active site
of the enzyme and the hydroxyl group forms hydrogen bonds
with aspartates Asp 25 and Asp 125. Water is replaced, allowing
the lactone moiety to hydrogen bond with the aps Ile 50 and
Ile 150.144
Several modications to PD 107067 were carried out. Extension of the SPh region to SCH2 Ph and SCH2 CH2 Ph
leads to improved activity.145 X-Ray diffraction studies showed
improved interaction between the SCH2 Ph group and the
S1 pocket. Systematic substitution of the phenyl group in
SCH2 Ph led to improved activity, with an isopropyl ester
adjacent to the sulfur linkage being the most successful.146
Studies on the mode of action revealed a change in the
overall binding mode. The ester function resides in the S1 in
contrast to that without the isopropyl ester group, where it
occupies the S2 pocket. Substitution of the phenyl ring with a
hydroxyl at the para-position, 3,4-benzodioxyl and 3,5-dimethyl
groups, gave improved inhibition. Further studies suggested that
branching at the 3-position might well achieve simultaneous
pocket occupation at both the S1 and S2 pockets. Vara Prasad
et al. arrived at a new series of (4-hydroxy-6-phenyl-2-oxo-2Hpyran-3-yl)thiomethanes (Table 2).
The S-aliphatic series demonstrates, in general, increased
potency over the aryl series. X-Ray crystallographic studies of
104n and HIV-1 PR showed a unique mode of binding. In this
case the lactone function only forms a hydrogen bond with the
NH of Ile 50 (compared with previous examples where hydrogen
bonding was observed with Ile 50 and Ile 150). The interaction
with Asp 125 and Asp 25 is also different. In this case, the
enol function hydrogen bonds with Asp 125 and indirectly with
Asp 25 via a bridging water molecule. The branching needed to
occupy the S1 and S2 pockets results in a chiral centre. The need
for this chiral centre could be removed with substitution of the
SPh group, in which case the substituent and the phenyl group
itself could occupy both of these positions. A small library of
such compounds resulted in a highly inhibitory 2-pyrone 105c
(IC50 = 0.037 lM).147 X-Ray diffraction studies on 105a show
that the isopropyl group occupies the S1 pocket, whereas the
3-S-phenyl group partially occupies the S2 pocket.
Nat. Prod. Rep., 2005, 22, 369385
377
Compound
R1
R2
IC50 /lM
104a
104b
104c
104d
104e
104f
104g
104h
104i
104j
104k
104l
104m
104n
104o
Ph
Ph
Ph
Ph
Ph
Benzyl
Benzyl
Benzyl
Cyclohexyl
Cyclohexyl
Cyclohexyl
Cyclohexyl
Cyclopentyl
Cyclopentyl
Cyclopentyl
H
Ph
Cyclohexyl
Isobutyl
Isopentyl
Ph
Isobutyl
CH2 cyclopropyl
Ph
Isobutyl
CH2 cyclopropyl
Neopentyl
Cyclopentyl
Isobutyl
CH2 cyclopropyl
84.3
0.78
2.44
0.41
0.39
0.48
0.26
0.084
0.48
0.32
0.15
0.30
0.22
0.058
0.069
4.2
Alzheimers disease is an age related neuro-degenerative disorder characterised by progressive memory loss and global
loss of cognitive functions. The production and deposition of
Compound
Tacrine, 117
Arisugacin A, 118a
Arisugacin B, 118b
Territrem B, 118c
Territrem C, 118d
200
1
25.8
7.6
6.8
12
>21 000
>516 000
>20 000
>26 000
Alzheimers disease,163 further attention has focused on the inhibition of acetylcholinesterase (AChE). The recently isolated natural product arisugacin164 contains the 6-aryl-4-hydroxypyrone
moiety and this function is necessary for biological activity.165
Arisugacin A 118a has shown huge potential in the treatment of
Alzheimers and other dementia diseases.166,167 In vitro potency
greater than existing anti-dementia therapeutics such as tacrine
117,168 aricept169 and huperzine A, was reported.170,171 It is
suggested172 that effective inhibitors should contain a nitrogen
atom to mimic the binding action of the quaternary nitrogen
of acetylcholine, a neurotransmitter responsible for memory
and other cognitive functions. A positively charged nitrogen is
believed to associate with Trp 84 situated near the anionic
gorge of the active site.167
Interestingly, 118a bears no nitrogen atom, so it obviously
functions by an alternative mechanism. Based on a modelling
study by Omura
and the known signicance of the DEring,164 Hsung made the sensible assumption that binding with
AChE may take the form of an electron-donatingelectronwithdrawing interaction.172 Electron density from the dimethoxy
group is coupled with the electron-withdrawing 2-pyrone ring.172
This prompted the group to synthesise a small library of 6-aryl-4hydroxy-pyrones that are analogues of 118a. The original source
of 118a produces only a small amount of the drug; an efcient
total synthesis has been reported.173
Omura
and co-workers isolated potent and selective inhibitors of AChE from a culture broth of Penicillium sp. FO425952,164,174,175 along with 118a. Arisugacin B 118b, territrem
A 118c and territrem B 118d, selectively inhibit AChE (Table 3).174 Tacrine, an AChE inhibitor drug approved by the FDA
demonstrates improvement of cognitive function in patients with
AD. This drug suffers from dose-limiting side effects thought to
be related to inhibition of butyrylcholonesterase (BuChE).176
A comparison of four of the isolated 2-pyrones with tacrine is
shown in Table 3. The compounds show much greater selectivity
than tacrine, opening up the possibility for the treatment of
AD with fewer side effects. Compound 118a and 118b show IC50
values of 1 and 26 nM, respectively, and also protect mice against
amnesia induced by scopolamine.
The effect of functional group changes to the inhibitory
potencies on electric eel AChE has been reported.165 Saturation
of the C-2 double bond, or reduction of C-1, caused a loss of
over 90% in activity. Epoxidation of the C-2 double bond had
little effect on activity. The 2-pyrone moiety proved crucial to
activity, as its disassembly was detrimental to activity.
Nat. Prod. Rep., 2005, 22, 369385
379
Table 4
Porcine
CEase
K i /lM
CRL 3
K i /lM
CRL 1
K i /lM
121a
0.04
58
960
121b
2.3
84
110
121c
2.2
12
120
121d
0.025
0.73
110
121e
0.13
96
120
121f
0.51
45
240
121g
0.80
16
>900
121h
0.50
53
225
Cpd.
Structure
381
Further reports involved the synthesis of a large library of 6alkyl (alkoxy or alkylthio)-4-aryl-3-(4-methanesulfonylphenyl)2-pyrones with either a H or F substituent at the para-position of
the C-4 phenyl again designed as selective COX-2 inhibitors with
in vivo anti-inammatory and analgesic activities (139141).207
Compound 140 exhibited excellent in vitro COX-2 inhibitory
values (IC50 = 0.0032 lM) and selectivity (SI >120 000). Insights
into selectivity were gained using theoretical studies, which
reveal that the SO2 Me substituent of 139 orients itself in the
vicinity of the secondary pocket of COX-2. COX-1 possesses no
such accessible pocket, due to the presence of the bulky Ile 523
residue.
Investigations by the same group showed that 141 was a
potent and selective COX-2 inhibitor (IC50 = 0.02 lM).208 A
group of regioisomeric 3,4,6-triphenyl-2-pyrones with a MeSO2
pharmacophore at the para-position of either a C-3 phenyl
or a C-4 phenyl substituent on the central 2-pyrone ring was
prepared and evaluated. COX-2 inhibitory potency is sensitive
to the substituent electronic properties at the para-position of
the C-6 phenyl ring. An electron-withdrawing substituent (CF3 )
showed reduced selectivity and potency (IC50 >100 lM) towards
COX-2.
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