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ISBN : 978-1-63315-205-2
Short Views on Insect Biochemistry and Molecular Biology Vol.(1), October 2014
2014
Section IV
Insect Molecular Genetics
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Short Views
on Vol.
Insect (1)
Biochemistry
and 2014
Molecular Biology Vol.(1), 2014
355 361,
Chapter 15
Insect exuvium extracted DNA marker: a good complementary
molecular taxonomic characteristics with special reference to
mosquitoes
K.J. Dhananjeyan1, R. Paramasivan1, V. Thenmozhi1, R.Chandrasekar2 and B.K. Tyagi1
1
Centre for Research in Medical Entomology (ICMR), 4-Sarojini Street, Chinna Chokkikulam,
Madurai 625002, TN, India
2
Department of Biochemistry and Molecular Biophysics, 238 Burt Hall, Kansas State Univeristy,
Manhattan, KS, USA
Abstract
Many a insect species, particularly sibling species complexes and those sylvatic taxa whose adults
are difficult to catch with information on breeding habitats, pose challenge to their correct
identification. Many genetical and molecular techniques have earlier been attempted on mosquito
species, but without much success in complimenting existing dichotomous keys. Taking cues
from a major molecular taxonomic breakthrough in odonata, we have adopted this technique
refered to as application of genomic DNA extracted from nondestructible structures in
mosquito taxonomy of important Culex, Anopheles and Aedes species.
Key words: Taxonomy, DNA marker, exuvium, cytochrome oxidase, moquito
*For Correspondence (email: abktyagi@gmail.com; abk. tyagi@yahoo.co.in )
1. Introduction
Insects are one of the highly diverged forms of life that exist in the biosphere.
And it has been estimated that only 10 % of the insects have been described and
approximately 10 million species await their discovery. On such grounds, it becomes
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Overview
1. Introduction
2. Advantage and disadvantages of morphology
based identifications.
3. Cytotaxonomy and molecular taxonomy
4. Acknowledgments
5. References
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All these drawbacks are overcome by the DNA based molecular taxonomy as it
could be used for specimens of any stage, sex and form. This is because of the fact that
genomic DNA could be isolated from wide variety of specimens such as immature,
adult, fresh, ethanol preserved, frozen, physically damaged during collection or
handling, museum specimens.
Application of this DNA based molecular taxonomic technique has been very
helpful in discriminating many sibling species belonging to a cryptic species complex.
Genomic DNA markers such as nuclear ribosomal internal transcribed spacers (ITSs),
microstallite sequences, mitochondrial cytochrome oxidase c subunits I & II (mtCOI &
II), NADPH, etc., are used. For example, the ITS markers have been used to identify
sibling species of several Anopheline mosquito complexes such as, Anopheles
maculipennis complex (4), An. quadrimaculatus complex (5) and An. culicifacies
complex (6); Culex vishnui subgroup mosquitoes (7,8) etc. Similarly the mitochondrial
DNA markers have been explored in differentiating the Aedes species mosquitoes (8,9)
For all these molecular taxonomy, the foremost important step and a prerequisite
is good quality of genomic DNA isolated from the specimen, which means that the
specimen, either whole or part, is to be sacrificed. This loss of specimen becomes
devastation in cases such as selection of traits in economically important insects (eg,
Honey bee, silk worm); endangered species (dragon flies, butterflies); loss of voucher
specimen (disease vectors, pests). To minimize the loss, many alternate sources were
used for the isolation of genomic DNA such as legs on one side of the specimens body,
wings or wing clippings and body segments. Even these sources for genomic DNA
isolation were found to cause difficulties. In the case cases of trait selection in honey
bee and silk worm, removal of legs or clipping the wings from the trait selected female
leaves them under-competitive in reproduction, ultimately making the selection
process a failure. In case of endangered species, leg removal or wing clipping renders
the individual weakness; and in case of disease vectors (Fig.1) and pests, loss of
specific discriminating morphological characters.
Recently use of non-destructive materials for the isolation of genomic DNA for
molecular taxonomic works and other molecular studies has been explored. These
non-destructive materials include larval & pupal exuviae and the egg shells. Studies
have revealed that these alternate non-destructive materials successfully yield genomic
DNA that could be used in molecular studies. Exuviae are the insect exoskeleton those
are shed by the immatures when moulting from one instar to the next. Exoskeletons are
biochemically chitin, a polymer of N-acetylglucosamine and do not contain any
nucleic acids. In spite of this nature the genomic DNA yield from exuviae could be
attributed to as then when moulting occurs, the epithelial cells lining the foregut, hind
gut and tracheae are pulled out along with the exoskeleton (10).
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Exuviae of honey bee, Apis melifera, have been successfully used by Gregory &
Rinderer (11) to amplify microsatellite DNA and thereby selecting a better trait of
queen bee to initiate a new colony. The genotypes of the fanning worker bees were also
determined using DNA from the exuviae without hurting or killing the organisms. The
emerging workers were marked with coloured, numbered tags to enable behavioural
observations over their entire life. Using this new method, Su et al., (12) determined 20
patrilines in a naturally mated queen colony, and discovered that the patriline
composition of bees exhibiting fanning behaviour was significantly different from the
patriline composition of the whole colony. The results confirmed that the genetic
structure of a natural insect society plays a fundamental role in the division of labour.
(11).
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Similarly, genomic DNA from exuviae of odonates has been utilized for studying
the population structure of the odonates by Watts and others (13). In the same way, the
DNA sequences of butter flies were analysed by Feinstein (14) that was isolated from
exuviae. The pupal exuviae of Chironomides were also been used to identify the
specimens to the species level following non-destructive method of genomic DNA
isolation. The work had yield very promising results by making use of the pupal
exuvium for DNA isolation without damaging the skin itself which further was
vouched for morphological identification purpose (15).
In a study by Dhananjeyan et al., in 2010, the use of egg shells along with larval
and pupal exuviae of the vector mosquitoes have been extensively studied. The exuviae
of different species of vector mosquitoes viz., Culex tritaeniorhynchus, Cx. vishnui,
Cx. pseudovishnui, (Fig. 2) Aedes aegypti and Ae. albopictus (Fig. 3) have been studied
for their use in molecular taxonomy
and all the species have provided
genomic DNA usable in species
differentiating PCR reactions. The
left out parts of mosquitoes are as
informative as the adult mosquitoes,
when
molecular
studies
are
concerned. These left-out materials
were very much useful in molecular
identi- fication of 3 important vector
mosquitoes belonging to the Cx.
vishnui subgroup, which are very
difficult to be separated in the adult
stage, as they have similar
morphological characters which
some times vary within species and Fig. 2. Gel picture showing differential PCR results
overlap between species in a identifying Culex triteaniorhynchus, Cx. vishnui &
proportion of specimens (16). They Cx. pseudovishnui with 536 bp, 246 bp & 344 bp
were also very much useful in respectively. Adapted from Dhananjeyan, et al. (8).
identifying the Aedes aegypti and
Ae. albopictus (8).
Fig. 3. Gel picture showing ITS2 PCR differentiating Aedes aegypti (330 bp) and Ae. albopictus
(520 bp). Adapted from Dhananjeyan, et al., (8).
The molecular markers for species identification are very powerful when
combined with traditional taxonomical tools. The only drawback is data on
intra-specific and geographical variation is very limited. This makes it essential to
vouch and submit the specimen, assigned to the DNA and study the biology of the
species in query. And the use of non-destructive sources of genomic DNA enables a
researcher to comply with the needs.
4. References
1.
Sivaramakrishnan, K.G., K.A. Subramanian, M. Arunachalam, C.S. Kumar & S. Sundar (2011) Emerging
trends in molecular systematics and molecular phylogeny of mayflies (Insecta: Ephemeroptera). Journal
of Threatened Taxa 3(8): 19751980.
2. Reinert, J.E. (2000) New classification for the composite genus Aedes (Diptera: Culicidae: Aedini),
elevation of subgenus Ochlerotatus to generic rank, reclassification of the other subgenera, and notes on
certain subgenera and species. J. American Mosquito Control Association. 16(3):175-188.
3. Subbarao, S.K., Vasantha, K., Adak, T., Sharma, V.P. (1983) Anopheles culicifacies Complex: Evidence
for a New Sibling Species, Species C. Annals of the Entomological Society of America 76(6): 985-988.
4. Porter, C.H., Collins, F.H. (1991) Species-diagnostic differences in a ribosomal DNA internal transcribed
spacer from the sibling species Anopheles freeborni and Anopheles hermsi (Diptera: Culicidae). Am. J.
Trop. Med. Hyg. 45: 271-279.
5. Cornel, A.J., Porter, C.H., Collins, F.H. (1996) Polymerase chain reaction species diagnostic assay for
Anopheles quadrimaculatus cryptic species (Diptera: Culicidae) based on ribosomal DNA ITS2
sequences. J. Med. Entomol. 33: 109-116.
6. Goswami, G., Raghavendra, K., Nanda, N., Gakhar, SK., Subbarao, S.K. (2005) PCR-RFLP of
mitochondrial cytochrome oxidase subunit II and ITS2 of ribosomal DNA: markers for the identification
of members of the Anopheles culicifacies complex (Diptera: Culicidae). Acta Trop. 95: 92-99.
7. Toma, T., Miyagi, I., Crabtree, M.B. and Miller, B.R. (2000) Identification of Culex vishnui Subgroup
(Diptera: Culicidae) mosquitoes from the Ryuku archipelago, Japan: Development of a species diagnostic
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8.
9.
10.
11.
12.
13.
14.
15.
16.
17.
18.
polymerase chain reaction assay based on sequence variation in ribosomal DNA spacers. J. Medical
Entomology 37(4): 554-558.
Dhananjeyan, K.J. Paramasivan, R., Tewari, S.C., Rajendran, R., Thenmozhi, V., Victor Jerald Leo, S.,
Venkatesh, A. and Tyagi, B.K. (2010) Molecular identification of mosquito vectors using genomic DNA
isolated from eggshells, larval and pupal exuvium. Tropical Biomedicine 27(1): 47-53.
Cook, S., Diallo, M., Sall, A.A., Cooper, A., Holmes, E.C. (2005) Mitochondrial markers for molecular
identification of Aedes mosquitoes (Diptera: Culicidae) involved in transmission of arboviral disease in
West Africa. J. Medical Entomology, 42(1): 19-28.
Bertholf, L.M. (1925) The moults of the honeybee. Journal of Economic Entomology 18: 380-384.
Gregory, P.G., Rinderer, T.E. (2004) Nondestructive sources of DNA used to genotype honey bee (Apis
mellifera) queens. Entomologia Experimentalis et Applicata 111: 173-177.
Su S., Stefan, A., Shaowu, Z., Sven, M., Shenglu, C., Honghu, D., Jrgen, T. (2007) Non-destructive
genotyping and genetic variation of fanning in a honey bee colony. J. Insect Physiology. 53(5): 411417.
Watts, P.C., Thompson, D.J., Daguet, C., Kemp, S.J. (2005) Exuviae as a reliable source of DNA for
population-genetic analysis of odonates. Odonatologica 34(2): 183-187.
Feinstein, J. (2004) DNA sequence from butterfly frass and exuviae. Conservative Genetics 5: 103-104.
Krosch, M.N. and Cranston, P.S. (2012) Non-destructive DNA extraction from Chironomidae, including
of fragile pupal exuviae, extends analysable collections and enhances vouchering. Chironomus. 25: 22-27.
Reuben, R., Tewari, S.C., Hiriyan, J. and Akiyama, J. (1994) Illustrated keys to species of Culex (Culex)
associated with Japanese encephalitis in Southeast Asia (Diptera: Culicidae). Mosquito Systematics 26:
7596.
Tyagi, B.K., Hiriyan, J., Tewari, S.C., Ayanar, K., Philip Samuel, P., Arunachalam, N., Paramasivan, R.,
Krishnamoorthy, R., Dhananjeyan, K.J., Victor Jerald Leo, S., and Rajendran, R. (2009) Description of a
new species, Anopheles pseudosundaicus (Diptera: Culicidae) from coastal Kerala, India. Zootaxa 2219:
4960.
Krishnamoorthy, R., Munirathinam, A., Dhananjeyan, K.J., Hiriyan, J., Mariappan, T., Philip Samuel, P.,
and Venkatesh, A. (2013) Description of a new species, Toxorhynchites (Toxorhynchites) tyagii (Diptera:
Culicidae), from Nilgiri hills, Western Ghats, South India. Zootaxa. 3701(4): 447-459.
Article History: Received 10th August, 2013; Revised 10th October, 2013; Accepted 1st January, 2014 and
Publsihed 30th October 2014.
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Insect Vectors
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Table Contents
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Page No.
Preface
Forward message
Contributors
Reviewers
Acknolwedgement
i
ii
iii
iv
v
Volume1
Section I: Insect Biochemical approaches
Raman Chandrasekar, P.G., Brintha, Enoch Y.Park, Paolo Pelsoi, Fei Liu,
Marian Goldsmith, Anthony Ejiofor, B.R., Pittendrigh, Y.S., Han,
Fernando G. Noriega, Manickam Sugumaran, B.K., Tyagi, Zhong Zheng Gui,
Fang Zhu, Bharath Bhusan Patnaik, and P. Michailova
2.
57
Sahayaraj, K.
3.
75
4.
99
5.
127
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149
Manickam Sugumaran
185
217
Insect Immunity
233
253
271
291
317
331
Paraskeva V. Michailova
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Dhanenjeyan, K. J., Paramasivam, R., Thanmozhi, V., Chandrasekar,R., and Tyagi, B.K.
Index
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Volume2
Section V:
373
385
in Lepidoptera.
409
Section VI:
429
449
473
497
509
Ronald J. Nachman
xix
Section VII:
533
549
Usha Rani, P.
575
595
Section VIII:
Insect Bioinformatics
621
633
685
Jitrayut Jitonnom
Index
709
xx
Book Mission Project # 2: Initiated on June 2010; Completed on March 2014 and Published on Oct. 2014.
PREFACE
Entomology as a science of inter-depended branches like biochemistry, molecular entomology, insect
biotechnology; has made rapid progress in its attributes in the light of modern discoveries. This also
implies that there is an urgent need to manage the available resources scientifically for the good of man.
In the past five decades, entomology in the world/country has taken giant steps ahead. Continued
research has evolved better pest management through molecular approaches. The aim of the Short
Views on Insect Biochemistry and Molecular Biology book is to integrate perspectives across
biochemistry and molecular biology, physiology, immunology, molecular evolution, genetics,
developmental biology and reproduction of insects. This century is proclaimed as the Era of
Biotechnology and its consists of all types of Mol-Bio applications, which is an essential component for
a through understanding of the Insect Biology. This volume 1 & 2 (8 section with 30 chapters)
establishes a thorough understanding of physiological and biochemical functions of proteins, genes in
insects life processes; the topics dealt with in the individual chapters include chemistry of the insect
cuticle, hormone and growth regulators; biochemical defenses of insects; the biochemistry of the toxic
and detoxification action; modern molecular genetics and evolution; inter- and intra-specific chemical
communication and behavior; insect pheromone and molecular architecture, phylogeny and chemical
control of insect by using insect pheromones biotechnology; insect modern biology and novel plant
chemical and microbial insecticides for insect control, followed by a discussion of the various
mechanisms of resistance (both behavioral and physiological) and resistance management; modern insect
pest management through biochemical and molecular approaches; Mimetic analogs of insect
neuropeptide for pest management; entomo-informatics and computer-aided pesticide designing. In short
this book provides comprehensive reviews of recent research from various geographic areas around the
world and contributing authors area recognized experts (leading entomologist/scientist) in their
respective filed of molecular entomology. We will miss this collaboration now it has ended, but will feel
rewarded if this book is appreciated by our team/colleagues and remarkable mile stone in entomology
field.
This book emphasizes upon the need for and relevance of studying molecular aspects of entomology in
Universities, Agricultural Universities and other centers of molecular research. To encompass this
knowledge and, particularly disseminate it to the scientific community free of cost, was the major
inspiring force behind the launch of Short Views on Insect Biochemistry and Molecular Biology.
Editors
Raman Chandrasekar
Brij Kishore Tyagi
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iv
vi
ShortViewson
InsectBiochemistryand
MolecularBiology
Editedby
Raman Chandrasekar, Ph.D.,
Kansas State University, USA.
B.K.Tyagi, Ph.D.,
Centre for Research in Medical Entomology (ICMR), India.
Zhong Zheng Gui, Ph.D.,
Jiangsu University of Science and Technology,
Sericultural Research Institute, Chinese Academy of
Agricultural Sciences, China.
Gerald R. Reeck, Ph.D.,
Kansas State University, USA.
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Contributing Authors
Dr. B.K.Tyagi
Prof.Fernando G. Noriega
Prof. K. Sahayaraj
Prof.Yanyuan Bao
Institute of Insect Science,
Zhejiang University, China.
Prof. PatriciaY.Scaraffia
Department of Tropical Medicine,
Tulane University, New Orleans,
LA 70112, USA.
Dr. P. Somasundaram
Central Sericultural Germplasm Resources Centre,
P.B.No.44, Thally Road,
Hosur-635109,
Tamilnadu, India.
College of Forestry,
Northwest A & F University
Yangling, Shaanxi 712100, China
ix
Dr. R. Srinivasan
School of Biotechnology,
Trident Academy of Creative Technology
(TACT), Bhubaneswar 751013 Odisha, India.
School of Science
University of Phayao, Thailand.
Department of Entomology,
University of Illinois, Urbana-Champaign, IL,
61801, USA
.
Prof. K. Murugan
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Acknowledgements
Writing and publishing a book requires the assistance of individuals who are
creative, talented, and hard-working. All of these qualities were present in the
individuals assembled to produce this book volume. I would like to express my
heartfelt gratitude to my former teacher Prof. Seo Sook Jae, (GSNU, South Korea),
Prof. Subba Reddy Palli (University of Kentucky, USA), and other external mentors
Prof. Marian R. Goldsmith (University of Rhode Island, USA), Prof. Enoch Y. Park
(Shizuoka University, Japan), Prof. M. Kobayashi (Nagoya University, Japan), Prof.
CHU Jang Hann (National University of Singapore, Singapore), Prof. Thomas W.
Sappington (USDA-ARS, USA), Prof. Fernando G. Noriega (Florida International
University, USA), Dr. Srinivasan Ramasamy, AVRDC, The World Vegetable
Center, Taiwan), Dr. H.C. Sharam (ICRISAT, India), who inspiration and
supported me at many ways for the commencement of this International Book
Mission Program. The book mission program was initiated on May 2010,
completed on March 2014 and published on October 2014. I have no words to
express my feeling for all those who provided valuable contributions from USA,
South Korea, Japan, China, India, Thailand, Taiwan, Bulgaria, France, Iseral, and
Portugal (Contributors name list, see page no. v) and made the completion of this
book possible. We express our appreciation to the following people (Reviewer
name list, see page no. vii) who reviewed various part of the manuscript as it was
being developed and improved quality of each chapter. I thank the ICMR, New
Delhi, and Chinese Academy of Agricultural, China, and Kansas State University for
support from several aspects. Many others (scientists and publishers) have also
allowed us to use their materials in the various chapters, their color image have then
been converted to gray color/BW. Iam especially indebted to International Book
Mission Organization, Academic Publishing Services for the production of book. I
thank my Co-Editors for their continuous vigilance over the book project and for
always giving advance notice of the editing and proofreading schedules. I thank also
my Brintha, P.G., (my wife), who in all possible way, encouragement helped
transform our original efforts into an acceptable final form. I apologize to those
whose work could not be cited owing to space considerations limitation. Further, I
wish to recognize the moral support extended by colleagues and friends. I hope that
this volume will inspire interest on the diverse aspects of insect biochemistry and
molecular biology in aspiring and established scientists.
Raman Chandrasekar
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