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o When their chick hatches, pushes wren eggs out of the nest
o Wren parents will feed cuckoo chick
o Specialized on different host populations (egg variation)
o Some birds can tell when cuckoo eggs are present
o Nest parasite
Brown headed cowbirds
o Feed on insects stirred up by grazers
o Parasite nests of other species
Leaf cutter ants huge colonies
o Common in neotropics
o Fungus Farmingdont eat leaves, form a fungus from them
o Take the leaves, clean them, chew it up, and spit in fungus
o Provides the fungus with what it needs and the fungus is food for the ants
Fungus depends on the ants, and the ants depend on the fungus
Fungus do not produce spores
o Castes: have worker ants (big) and minima ants (small) in the back
o Females do the work, males only used for reproduction
o Inclusive Fitness
Fitness based off of genes and not individuals
Genes are deck of cards- 50% of genes from father and your sibling also got 50%
so on average you have a 25% overlap with your sister from your fatherif 25%
from father and 25% from mother than you are 50% related to your siblings
Leaf cutter ants are altruistic siblings
Males are only 50% of a deck of cards when it comes to genes and child
still gets half from father and half from mother so siblings are 75% related
to each other (more apt to sacrifice fertility)
Three spined stickleback males
o Brightly colored in mating season
o Male makes nest and are highly aggressive establishes and defends territory
o Court females and she lays eggs in his nest
o Fertilize outside of the body
o Male stays with eggs, and fans eggs to make sure they have enough oxygen
o Male parental care
Male is the last one with the eggs
NOTES
Ecology
o Study of interactions among organisms, and between organisms and their environment
Evolution can be observed in a lab
Biome
o General category of ecological community
What is Life
o Bacteria
o Viruses
Tobacco masiac virus
In 1892 Dimitri Ivanosky discovered it wasnt a bacteria
Then in 1898- Martinus Bejerinck discovered infected only dividing cells
Virus- Latin for poison
Contain genes
Subverting protein synthesis apparatus of host cells (how they live)
**Review of Genetics**
Gene is the information for producing one protein
DNA (RNA) proteins
Gene= sentence encoded in DNA
4 molecules: A T C G
codons- 3 letter works
-ATA-CGG-ATA
o gene is a sequence of 10s of 1000s of protons
ATA= glycine
CGG= alanine
o Amino acids
Proteins are chains of amino acids
o Building blocks
o Enzymes are proteins= catalyst that controls a chemical reaction
If you control protein synthesis then you can control chemical reactions
and can control life
Viruses take over DNA process
Viruses bacteriophages
Hand, neck, collar, sheath, tail fiber, DNA)
starts taking over the chemistry of the cell because injects its own DNA
Virus DNA has how to create more virus proteins
Eventually new viruses are assembles
o Death of bacteria cells, then more viruses
Contains genes
Evolve
Reproduce
Free Living
Transform energy
Charles Darwin
o Lived 1809-1882
o Failed medical school
o Recruited to survey shorelines
Voyage of the HMS Beagle
Different tortoise shells
Pigeon breeds from The Variation of Animals and Plants Under Domestication
Book
He wasnt in good health so wrote journals and books where he talked about
evolution ideas The Origin of Species
o Observations Darwin Made
Differences among Species can be vague
Geological specimens are different from species today
History is important for the present distribution of species
o In 1858 Alfred Russell Wallace made Darwin publish his ideas
Presented it in front of the royal society and then he wrote his book Origin of
Species
Two themes:
o Natural Selection
o All Species are descended from common ancestors
o Evolution is a scientific fact
o Ideas by Darwin
Different species are related
All species are descended from common ancestors
Natural selection explains process of evolution
Natural Selection
o Main driver of evolution
o Evolution
Change in genetic makeup of a population of organisms through time
1. Genetic makeup= traits are heritable offspring tend to look like parents
2. Population= group of potentially interbreeding individuals (single individuals do
not evolve)
3. Changenot improve
4. Through time= can be fast or slow
Effects us all the time (new flu every season)
o Natural Selection
Variability among individuals
Variability is heritable
Variability effects fitness
Fitness number of offspring
o Involves survival of reproduction
o Relative contribution to the genetic make up of future population
Can happen with traits and fertility
REVIEW DISCUSSION NOTES
Natural Selection will always drive evolution but other things can drive evolution as well
Genetic mutation= random change in genes between generations
Natural Selection does not require mutations in the short run, but does in long run
50% genetically related to mom, 50% genetically related to sister
In terms of evolutionary fitness, saving life of your child is equivalent to saving life of how many of
your siblings 1
Genetic Mutations
o Ultimate source of new genes
Artificial Selection
o Rather than nature, humans do the selection
DIVERSITY OF LIFE
Chapter 2:
Cataclysms occur in nature
Ecological communities can recover from cataclysms- Krakatau recovered through recolonization
Chapter 3:
Five great extinctions have occurred in geological history
The Cretaceous- Tertiary extinction of dinosaurs could have been caused by meteors hitting the
earth
The larges extinction event at the end of the Permian could have been due to continental drift and
global climate change
Although we dont definitely know the reasons why, mass extinctions have occurred in the past,
and recovery of species diversity following extinctions takes millions of years
Chapter 4:
Life can be viewed as the struggle to get energy
Biomass vs. energy pyramids
The Biological Species Concept
Identifying species of Anopheles was important for controlling malaria
Problems with applying the Biological Species Concept: sibling, species, semispecies,
chronospecies, and parthenogenesis
Chapter 5:
Speciation is the formation of populations that are not infertile
Speciation as a by-product of vertical evolution
Geographical speciation- example of a butterfly species
Speciation through polyploidy
Sympatric speciation: example of a fruit fly
Notes from Review Session:
Darwin never knew what maintains individual variation
However mutation is not necessary for natural selection to happen from one generation to the next,
it just keeps going
Darwin didnt look at genes
Evolution of traits by natural selection will be faster when large amounts of variability in the
survival of individuals is explained by the traitstrong selection pressure
Living organisms dont have to mate with other individuals (can be asexual)
Viruses are not alive
Rate of evolution of a population may increase due to global change because of increasing natural
selection
Punctuated equilibrium things dont change much but are punctuated with big events
Test 2 Ecology
Platypus
o Three mammal groups: placental, marsupial, monotreme
Mammals are defined as having mammary glands to produce milk
o Live in river banks in Australia
o Their bills sense electric activity and help them find food
o Lay eggs and have intensive parental care for several months
o Both sexes are poisonous when young but only males retain poisonus spurs
Sexual selection
Pea aphids
o Feed on phloem of peas, beans, clover
o Most common aphid is alfalfa
o In the summer theyre parthenogenic
Reproduce without sex
Only produce females
Produce genetically same as mom (clone)
Because genetically the same, something bad for one is bad for all
Males allow diverse offspring (more likely to be resistant)
Allows for survival
Main predator is the lady bug
Insectivorous Bat
o Sonar allows them to fly at night
o Flying mammal (bats are only one)
o Flight for bats arose differently then it did for birds
Tuatara
o Located at only 30 small islands around New Zealand
o Only species that has distinct wing of evolution (evolutionary tree)
Closer to crocadiles and birds
o Concern to preserve them
o Live to 60 and reproduce at 10
o Slow birth rate
o Humans give females food that increase hormones so they can produce more
o Endangered
Grevy Zebra
o Largest of the 3 zebras (Plain, Mountain, Grevy)
o Male guarding territory
Females go through male territory and males in that territory tries to mate with her
Mountain= 5 or 6 females per 1 male (small harem)
Plain= large herds (large harem)
o Grevy has largest testes/ weight
Summary of Evolution
o Evolution is a scientific fact
o Natural selection- variability, heritability, and differential fitness
o Natural selection acts on individuals but is measured by changes in the genetic makeup of
populations
o Natural selection leads to adaptions
o Speciation = permanent genetic isolation
o Evolution has no purpose
Ecology Test 3 Notes
Organisms of the Day
Polar Bears
o Almost exclusively meat eaters
Main prey is seals
o Females milk has high fat content
o Mate in spring but give birth in winter
o Fur is hollow and colorless
Allows light to penetrate black skin
o Conservation concern: shrinking ice pack reduces feeding time and leads to drowning
Sea Lamprey
o Jawless fish
Ancient group of early vertebrate
Cartilaginous skeleton
o Complex life history
Juveniles filter feed in streams and rivers
Adults parasitize fish (sea or lake)
Spawn back into streams and rivers
o Invasion of Great Lakes
Migrated through Erie Canal
Currently in all Great Lakes
o Consequences of Invasion
No natural predators
Larger than native lamprey
Pops of lake trout drop in 30s and 40s
Alewives pop explodes following loss of predators
Muskox
o Related to sheep/goats
o Winter: in the high arctic due to lower snowfall; group sizes of up to 50 for herd protection
o Summer: move southward and have mixed diet; smaller groups
o Historic populations in Asia, Europe, and North America
Locally extinct due to climate change and hunting, but re introduced into Europe
and Canada
Alpine Lichen
o Fungus and algae mutualism
Fungus traps algae and provides nutrients and moist environment
Algae performs photosynthesis and provides sugars for energy
Fungus farms algae: no one specific species of algae
o Grow very slowly used for dating
Typical of the tundra
o Efficient at getting nutrients, even out of the atmosphere
o Took up radioactive nutrients, which were transferred to reindeer and eventually to humans
in high latitudes
Atlantic Puffin
o Not good flyers, fish eaters
o Spend life at sea but come back to breed
o Males slightly larger
o After chicks hatch, go to sea
Global Biomes and Global Problems
Biome
o Google it
http://www.mpsaz.org/mtnview/staff/yamoreland/class5/powerpoint/files/rain_shadow_effec
t.pdf
More rainfall at equator because more clouds form along it (warmer air)
Terrestrial biomes determined by temp and precipitation
o Cold and wet do not occur together
Arctic and Alpine Tundra
o Tundra characteristics
Arctic- high latitude
Alpine- high altitude
No trees, cold, low rainfall
Arctic= little evaporation
Wet in summer
Soil frozen
Dry in winter
Productivity is low soil formation low
Diversity is low
Has standing water because low evaporation
Permafrost
Ice that is permenantly frozen (even in summer)
Low living plants
Animals- lemming and acrtic foxes
Why are there no trees
Little snow cover
Short and cool growing season
Permafrost
Alpine tundra=
Arctic and alpine climates are different because of seasonality, daily
temperature change, and UV radiation
Large fluctuation
Environmental issues
pix in phone
ANWA
Skaftafell
o SUMMARY
Tundra: cold, fairly dry (low to moderate precipitation), and treeless
Acrtic tundra: high latitude (north or south)
o Little evaporation, can be wet in summer
Soil frozen in winter (functionally dry); drought is common
Alpine tundras: high altitude
o Low productivity and low diversity
Most tundra occurs in northern Russia and Canada
Examples
o Shefferville, Labrador
Lots of erosion because of little growth
Not huge amounts of precipitation, but low evaporation,
so there is a lot of standing water
Permafrost permanently frozen ground, although there
can be soil on top
Lack of trees occurs due to low snow cover, short cool
growing season, and permafrost
Differences between Arctic and Alpine
o Seasonality- sunlight due to latitude
o Daily temperature change- temp changes in arctic is not
substantial
o UV radiation- in alpine areas, little atmosphere cover
Environmental Issues in Tundra
Low productivity= low recovery
Conflicting interests in ANWR
o Coastal plain is under heaviest consideration due to oil drilling
o Continuous discussion about opening up ANWR for drilling
o Coastal plain is near to arctic ocean, which is fairly productive,
important area for wildlife
Conservation of Skaftafell, Iceland
o Not conflicting interests, but conflicting strategies
o Preserving human lifestyle vs, preserving pre-human landscape
o Alaskan lupine: invasive plant species
o Broad agreement that conservation is a goal, but what is
conserved and hot to pay for it can be contentious
Coniferous Forests
o Made up of needle trees
o Boreal forests
o Mountain forests
o Located in northern forests
o Boreal forest- spruce moose
Cols and low moderate precipitation
Low diversity
Low productivity
Acidic needles
Pour soils
Central
Spruce, fir, boring
Southern
More diverse, trees drop leaves (more color)
Typical animal= elk
Lots of bogs
Very acidic
Tollund Man?
Sphagnum Moss
Strong competitor (grows a lot)
Bog succession is so slow
Diagram in notes
o Mountain Coniferous forests
Moderate tree diversity= more varied terrain
Temperate Rain forests
Extreme coniferous forests
Pacific north west
Very high precipitation (20 ft/ year)
Cool summers, mild winters
Highest coniferous tree diversity
Redwood forest, western red cedars, sitka spruce, duglas fir, western
hemlock
Hard to walk through because a lot of dead wood
o Summary
Boreal Forest
Spruce-moose forest
Cold and low moderate rainfall
Low diversity, low productivity
Acidic needles and therefore poor soils
Northern Russia, northern north America (Canada, Alaska)
Bogs in Coniferous Forest
Bog biological activity is very slow
Positive feedback loop: acidic soil nutrient poor soils sphagnum
moss is one of the few things that can grow sphagnum moss lowers pH
of waters around it
Bogs fill in with sphagnum; peat is compacted sphagnum
Mountain Forest
Moderate tree diversity
More varied terrain
o North facing slopes vs. south facing slopes
o Altitude
Temperate Rainforest
Primarily in Pacific Northwest
Cool summer and mild winter due to coast
High rainfall
Highest coniferous tree diversity
Nurse Log: important for regrowth of forests; trees grow out of trunk of
fallen trees
o Environmental Issue
Logging
Converting natural forest into a managed forest
o Straight compact trees, stay for about 60 years
Conflicting interest on public land
Deciduous Forests
o Temperate, tropical
o Wisconsin, east coast, Russia, china
o Tropical- costa rica, brazil
o Strong seasonal environment
o Can be temperate or tropical but most importantly must be seasonal
o Moderate productivity
o Moderate Diversity
o Distinct seasons, trees drop their leaves
o Why do deciduous trees (which drop their leaves) live in warmer climates than coniferous
trees?
Broad leaves= more efficient for photosynthesis (2x more)
Cost to a tree dropping its leaves- lose mass
Length of growing season in warmer climates- longer
Google
By having longer growing season beach can take advantage of the leaves
o Local plant diversity depends on local environment diversity (true for all biomes)
o
Ecology Test 4:
Organisms of the Day
Three-toed sloth
o 4 species in New World
o Important herbivores in tropical rain forests
Feed selectively
o Poor quality food source
Have huge stomachs
Move very little
Very little musculature
Low metabolism
o Mutualism with algae
o Mothers carry young on stomach
Cultural transmission of food sources
o Defecate on forest floor 1/wk
Ant Acacia Tree
o Mutualism between Tree and Ant
The Green Revolution: more food per person now than before due to technological advances
o Chemicals (pesticides)
o Irrigation
o New crop varieties (hybrids)
o Fossil fuels (mechanization and machinery)
Why are people malnourished?
o Distribution of wealth
o Wars and politics
Will there be enough food for the population in 2050?
o Need another 70% food increase to ensure everyone of 9 billion is well fed
o Over last 40 years, has been 150% food increase
Green revolution is showing signs of faltering
o Technological limits, especially to new varieties of crops
Crops are still improving, but at a slower rate
o Limited arable land
Much of undeveloped land is over 6 hours from market
In Asia and middle east, very little undeveloped land
o Land degradation
Soil loss due to erosion and grazing
o Limited water availability
Irrigation was responsible for ~30% of Green Revolution
Chaparral:
Mediterranean and west coast of United States, desert-like area around the coast
o Cool and wet winters but hot and dry summers
o Low productivity due to low rainfall
o Low diversity, but variable
o Fire prone, many seeds need the heat of fire to germinate
o After fires, profusion of new growth
Deserts
30 degrees North and South
o dry by definition, but either hot or cold
o low productivity due to low rainfall
o low diversity, but variable
o Plants must be able to either go without water OR capture it efficiently when it comes in
episodes
Many plants have spines: convergent evolution in extreme climates
o Spines stop the wind from evaporating water
o Trap air next to plant and keeps it more moist
Other plant adaptations: taproots, expandable, gas exchange at night, and quick uptake of water
Animal Adaptations
o Birds produce uric acid rather than urea
All animals have to excrete nitrogenous wastes
Uric acid has little water compared to urea
Oceans
Productivity in oceans
o Very low productivity between 30 degrees north and south, but a bit by the equator
o High productivity along coasts and close to poles
o ~half of global primary productivity occurs in oceans
Productivity in surface waters is determined by nutrients which have 2 main sources
o Runoff
o upwelling
Test 6
Organisms of the Day
Badgers
American Badger
o Only 1 of 8 species is in North America
o Generally predators: interlocking teeth
o Dig up burrowing prey
o Forced mating by the males, otherwise females wont release eggs
European Badger
o Feed on Earthworms
o Sociality: live in groups
Honey Badger
o Larger and faster then European/ American badgers
o Generally predators
Midges In Lake Myvatin
Live in sediment as juveniles
o Eat algae and detritus
o Build tubes
Mate on land in swarms
o Swarms are mostly males
o Many die on land
Effects on surrounding landscape
o Mygrass- fertilization of plants
o Competitive exclusion principle- two species that use the same resources cannot coexist
forever
Coexistence and Competition
o How do competing species coexist
o 1. Resource partitioning: species use different resources
there are some resources that unique to the competing species, even if some
portion is shared
coexistence is possible when competition within species is greater than
competition between species
no master of all trades in species; there are always tradeoffs
MacArthurs warblers; birds feed in different portions of one tree
o 2. Predation on one or both species
predation is stronger on the better competitor
stops the most competitive species from wiping out their competitiors
predator can prey on both competitors, so long as it is higher on A
Mussels on Tatoosh
Muscles are good competitors on rocky interdial areas
Consumed by starfish
Predation
o Predator (B) has negative impact on prey (A)m and prey has a positive effect on the
predator
Means an increase in the density of A results in a higher per capita growth rate of
B, but higher B means lower per capita growth of A
Includes a disease, herbivory, predation, parasitism
Organisms, throughout their life cycle, can be both predator and prey to the same
other organism
o Why dont predators kill all their prey
Prey defenses
Complex habitats
Predators have their own predators
-Greenhouse gases produced by humans: Carbon dioxide, CFCs (chlorofluorocarbons), CH4 (methane)
-Climate fluctuations in the recent past
- Medieval Warm Period (900-1400s)
- allowed Vikings to settle in Greenland (temporarily)
- Recently coldest (17-1800s)
-Napoleon in Russia 1812
- Past changes explained by natural forcings
-Currently globally warmer than has been in past
-Indicators of a HUman Fingerprint on Climate Change
-shrinking atmosphere, less heat escaping to space, cooling stratosphere, more fossil fuel carbon
in the air, more heat returning to Earth, more fossil fuel carbon in coral, nights warming faster than dats,
less oxygen in air
- Climate models give a range of predictions, but generally show increase of 2-5C over next 100 years
-2-5 degree average difference
warmer temperatures
earlier spring snowmelt
longer fire seasons
Fire
from 1987- 2003
Ecosystem Ecology
Ecosystem- organisms and their environment (energy and nutrients)
o Energy flows- in and out of the entire Earth, originating from the sun and then radiating
back out into space
o Nutrients cycle- within the Earths system
Why look at Energy flows?
o Energy flows differ among ecosystems
Aquatic vs terrestrial
o Energy gives a common currency
Compare different ecosystems
o There are too many species to consider each separately
Summary of food webs
Food webs are difficult to map accurately
Trophic Levels
o Bottom is primary producers (plants, photosynthetic)
o Next are primary consumers (herbivores)
o Then secondary consumers (predators)
o Primary productivity is the amount of plant biomass added to the system per area per year
Ecological Efficiency- is how the energy is passed on
o The proportion of energy in one trophic level that gets transferred to the next level
o Efficiency in aquatic systems is higher than terrestrial systems
Land plants have a lot of cellulose
More aquatic organisms are cold-blooded
With each higher trophic level, energy is lost
o In terrestrial systems, explains why top predators are rare
o In aquatic systems, efficiencies are higher, there are greater abundances of predators
o The energy flow pyramid in terrestrial systems tapers extremely rapidly
Variation in food pyramids in fisheries depend on where fisheries occur
o Upwellings produce ~100x biomass of fish caught in open ocean
o Biomass in tuna vs. anchovies
o Trophic position explains distribution of fish in oceans
Nutrient Cycles: Carbon
Carbon and energy are tightly coupled
o Both photosynthesis and respiration require carbon
o CO2+ H2O+light carbs +O2 (photo)
o Carbs +O2 CO2+H2O+energy (respiration)
Carbon cycle