Académique Documents
Professionnel Documents
Culture Documents
Jen Alleva
MacMillan Group Meeting
January 8th 2014
Thursday, January 9, 14
"By the end of this course I will be able to look at all of your retrosyntheses and know which one of you
produced it. You will all develop your own unique and recognizable style over the next few months."
Paul Reider, Graduate Synthesis
Common trend: Modern organic chemists have unique retrosynthetic strategies rendering their syntheses
easily recognizable to the well-read practitioner of organic chemistry
Thursday, January 9, 14
Corey, E. J.; Cheng, X.-M. The Logic of Chemical Synthesis, John Wiley & Sons, New York, 1995, pp 6.
Thursday, January 9, 14
Target
Molecule
retron
keying elements
Int2
Int1
transform: Diels-Alder
SM1
Int4
Int3
SM2
Int5
Int6
SM3
SM4
OH
Me
Me
OH
Me
Me
retron
Me
Me
O
Me
O
Br
Me
Cu
OR
Me
Me
Corey, E. J.; Cheng, X.-M. The Logic of Chemical Synthesis, John Wiley & Sons, New York, 1995, pp 6.
Thursday, January 9, 14
Corey, E. J.; Cheng, X.-M. The Logic of Chemical Synthesis, John Wiley & Sons, New York, 1995, pp 6.
Thursday, January 9, 14
Me
Me
Me
H
Me
Me
O
O
H
Me
Me
Me
Me
cyanthiwigin F
Enquist Jr., J. A.; Stoltz, B. M. Nature, 2008, 453, 1228.
Thursday, January 9, 14
Thursday, January 9, 14
O
O
Me
H
Me
N
H
Me
H
H O
Me
Me
H
N
H
Me
H
H O
Me
H
N
H
Me
H
H O
()-tuberostemonine
Wipf, P.; Rector, S. R.; Takahashi, H. J. Am. Chem. Soc., 2002, 124, 14848.
Thursday, January 9, 14
Thursday, January 9, 14
PMP
OH
AcO
SePh
PMP
O
O
Me
Me
Me
Me
Me
Me
Me
Me
Me
Me
Me
Me
guanacastepene E
Shipe, W. D.; Sorensen, E. J. J. Am. Chem. Soc., 2006, 128, 7025.
Thursday, January 9, 14
Transform-Based
Structure-Goal
Topological Strategies
transform or tactic
intermediate or SM
bond disconnections
i.e. rearrangements
and network analysis
Stereochemical Strategies
Thursday, January 9, 14
Corey, E. J.; Cheng, X.-M. The Logic of Chemical Synthesis, John Wiley & Sons, New York, 1995, pp 38.
Thursday, January 9, 14
Disconnect
Preserve
Corey, E. J.; Cheng, X.-M. The Logic of Chemical Synthesis, John Wiley & Sons, New York, 1995, pp 38.
Thursday, January 9, 14
Disconnect
Preserve
O
(CH2)3CO2H
TBSO
CHO
C5H11
C5H11
OH
OH
PGA2
Thursday, January 9, 14
Disconnect
to make symmetrical fragments
CX bonds (Cheteroatom, esters, amides, etc)
easily formed rings (lactone, lactam, hemiacetal)
Corey, E. J.; Cheng, X.-M. The Logic of Chemical Synthesis, John Wiley & Sons, New York, 1995, pp 38.
Thursday, January 9, 14
Disconnect
to make symmetrical fragments
CX bonds (Cheteroatom, esters, amides, etc)
easily formed rings (lactone, lactam, hemiacetal)
HO
O
H
HO
O
H
acylation/desulfurization
Me
iodolactonization
CH2I
Me
O
Me
PhO2S
Me
HS
Me
H
Me
(+)-dihydromevinolin
Falck, J. R.; Yang, Y.-L. Tetrahedron Lett. 1984, 25, 3563.
Corey, E. J.; Cheng, X.-M. The Logic of Chemical Synthesis, John Wiley & Sons, New York, 1995, pp 38.
Thursday, January 9, 14
Disconnect
Preserve
Corey, E. J.; Cheng, X.-M. The Logic of Chemical Synthesis, John Wiley & Sons, New York, 1995, pp 39.
Thursday, January 9, 14
Disconnect
Preserve
Me
Me
Me
H
Me
Me
O
O
oxidative
dimerization
O
O
O
O
O
O
OH
oxidative
dimerization
carpanone
Chapman, O. L.; Engel, M. R.; Springer, J. P.; Clardy, J. C. J. Am. Chem. Soc. 1971, 93, 6696.
Corey, E. J.; Cheng, X.-M. The Logic of Chemical Synthesis, John Wiley & Sons, New York, 1995, pp 41.
Thursday, January 9, 14
Disconnect
Preserve
Corey, E. J.; Cheng, X.-M. The Logic of Chemical Synthesis, John Wiley & Sons, New York, 1995, pp 42.
Thursday, January 9, 14
Disconnect
Preserve
Me
HO
Me
O
Me
Me
en route to longifolene
Functional Group-Based
O
O
CO2Me
O
HO
OBn
HO
MeO2C
H
HO
Phragmalin-type Limonoids
Sarpong Group, Berkeley
Transform-Based
OH
Me
HO
OH
OH
Ouabagenin
Baran Group, Scripps
Structure-Goal
O
O
Me
HO
N
O
Thursday, January 9, 14
Me
()-Curvularin
()-Lycojapodine A
Functional Group-Based
O
O
CO2Me
O
HO
OBn
HO
MeO2C
H
HO
Phragmalin-type Limonoids
Sarpong Group, Berkeley
Transform-Based
OH
Me
HO
OH
OH
Ouabagenin
Baran Group, Scripps
Structure-Goal
O
O
Me
HO
N
O
Thursday, January 9, 14
Me
()-Curvularin
()-Lycojapodine A
H
AcO
O
O
CO2Me AcO
Me
AcO
Me
Me
O
O
OH
Me
Xyloccensin O
octahydro-1H-2,4-methanoindene core
phragmalin-type limonoid
CO2Me
OTBS
6 steps
O
CO2Me
OBn
MeO2C
O
OBn
Lebold, T. M.; Gallego, G. M.; Marth, C. J.; Sarpong, R. Org. Lett., 2012, 8, 2110.
Thursday, January 9, 14
longifolene
Corey, E. J.; Ohno, M., Mitra, R. B.; Vatakancherry, P. A. J. Am. Chem. Soc. 1964, 86, 487.
Thursday, January 9, 14
most bridged
ring system
homodaphniphyllate framework
Thursday, January 9, 14
intermolecular alkylation
O
O
CO2Me AcO
AcO
OBs
O
Me
AcO
Me
OBn
Me
MeO2C
O
OH
OBn
MeO2C
Me
Xyloccensin O
Diels-Alder
OTBS
OBs
OBs
O
OBn
H
OBn
MeO2C
CO2Me
O
CO2Me
O
OBn
more reactive
conformer
Thursday, January 9, 14
OTBS
OTBS
H
PhMe, 100 C
OTBS
H
Pd/C, H2
CO2Me
(>10:1 endo:exo)
O
OBn
89%
EtOAc
O
OBn
CO2Me
OH
H
1M HCl
OBs
H
BsCl, pyr.
precursor to
intramolecular
cat. DMAP
MeOH
O
OBn
CO2Me
OBn
CO2Me
CH2Cl2
OBn
CO2Me
alkylation
Lebold, T. M.; Gallego, G. M.; Marth, C. J.; Sarpong, R. Org. Lett., 2012, 8, 2110.
Thursday, January 9, 14
OBs
BnO2C
conditions
O
OBn
(below)
O
OBn
CO2Me
MeO2C
14
H
MeO2C
21
Lebold, T. M.; Gallego, G. M.; Marth, C. J.; Sarpong, R. Org. Lett., 2012, 8, 2110.
Thursday, January 9, 14
OBs
BnO2C
conditions
O
OBn
(below)
O
H
H
MeO2C
OBn
CO2Me
MeO2C
14
21
BnO2C
BnO
OBn
MeO2C
OBn
OBn
OBn
MeO2C
CO2Bn
MeO2C
H
MeO2C
Lebold, T. M.; Gallego, G. M.; Marth, C. J.; Sarpong, R. Org. Lett., 2012, 8, 2110.
Thursday, January 9, 14
CO2Me
OH
H
OBn
CO2Me
1. DMP, NaHCO3
CO2Me
CH2Cl2
KOtBu, THF
2. Ph3P=CHCO2Me
78 C - 0 C
CH2Cl2
OBn
CO2Me
O
OBn
MeO2C
79%
Lebold, T. M.; Gallego, G. M.; Marth, C. J.; Sarpong, R. Org. Lett., 2012, 8, 2110.
Thursday, January 9, 14
Functional Group-Based
O
O
CO2Me
O
HO
OBn
HO
MeO2C
H
HO
Phragmalin-type Limonoids
Sarpong Group, Berkeley
Transform-Based
OH
Me
HO
OH
OH
Ouabagenin
Baran Group, Scripps
Structure-Goal
O
O
Me
HO
N
O
Thursday, January 9, 14
Me
()-Curvularin
()-Lycojapodine A
nepatalactone
enamine-,-enal cycloaddition
Clark, K. J.; Fray, G. I.; Jaeger, R. H.; Robinson, R. Tetrahedron, 1959, 6, 217.
Thursday, January 9, 14
accessing
(+)-Gliocladin C
functional group
removed by photochemical
reduction
Furst, L.; Narayanam, J. M. R.; Stephenson, C. R. J. Angew. Chem. Int. Ed. 2011, 50, 9655.
Thursday, January 9, 14
reserpine
LeBold, T. P.; Wood, J. L.; Deitch, J.; Lodewyk, M. W.; Tantillo, D. J.; Sarpong, R. Nat. Chem., 2012, 5, 126.
Thursday, January 9, 14
Pd-catalyzed
coupling
reduction
epoxidation/
reductive opening
deprotection
HO
HO
Me
Me
HO
H
H
OH
OH
HO
HO
Me
H
O
OH
OH
oxidation
Et
chemo/regioselective
CC fragmentation
HO
Norrish type 2
Me
Me O
O
O
O
Me
HO
O
O
Me O
HO
H
H
HO
Me
Me
H
H
O
O
andrenosterone
LeBold, T. P.; Wood, J. L.; Deitch, J.; Lodewyk, M. W.; Tantillo, D. J.; Sarpong, R. Nat. Chem., 2012, 5, 126.
Thursday, January 9, 14
Me O
O
Me
H
OH
HO
H
H
Me
HO
1. H+
2. h
O
O
H
H
Norrish Type 2
adrenosterone
Thursday, January 9, 14
Me O
O
Me
H
OH
HO
2. h
Me
HO
1. H+
O
O
H
H
Norrish Type 2
55% over two steps
adrenosterone
Me O
O
Me
HO
H
H
Me O
H
H2C
H
Thursday, January 9, 14
O
Me
H
OH
HO
O
O
H
H
2. h
Me
HO
1. H+
Me O
NIS, Li2CO3
Norrish Type 2
55% over two steps
adrenosterone
Me
H
H
HO
TiCl4
AgOAc
Me
85%
H
H
HO
1. H2O2
Me
H
O
2. SeO2
71%
Thursday, January 9, 14
HO
Me
H
H
H2O2
O
O
H
H
H
O
HO
Me
Thursday, January 9, 14
HO
Me
H
H
H2O2
O
O
H
H
H
O
HO
Me
Al-Hg
HO
HO
Me
H
O
H2O
OH
56%
Thursday, January 9, 14
HO
Me
H
H
H2O2
HO
Me
H
H
H
O
Al-Hg
HO
Me
O
Me
OH
Me
1. Li, NH3
Et
Me O
HO
H
H
2. LiBEt3H
O
Me
O
1. PPTS, Me2CO
56%
O
O
H
H
Me
H2O
HO
Me
1. PPTS, Me2CO
Et
Thursday, January 9, 14
Me
Me
O
HO
Me
H
H
Me
Me O
HO
H
H
2. SiO2, DIPEA
F
F3C
Me O
Et
Et
F
O
O
Me
Me
O
Me O
HO
H
O
OH
2. CuTC (3 equiv)
Pd(PPh3)4 (15 mol%)
DMF
Et
86%
Me
CH2Cl2/EtOH
O2, PhSiH3
dioxane
Me
Bu3Sn
Me
HO
H
H
O
O
OH
Et
Thursday, January 9, 14
O
Me
Me
O
Me
HO
H
H
OH
Me
1. CoCl26H2O, NaBH4
EtOH, 0 C to rt.
B
Et
2. PhH, 100 C
Me2N
Me
NtBu
Me2N
Me
HO
H
O
B
Et
OH
Thursday, January 9, 14
O
Me
Me
O
Me
HO
H
H
Me
1. CoCl26H2O, NaBH4
EtOH, 0 C to rt.
Me
O
2. PhH, 100 C
OH
Me2N
O
NtBu
Me2N
Et
Me
HO
B
Et
OH
O
O
HCl (conc.)
MeOH, rt.
HO
HO
Me
HO
ouabagenin
H
90%
H
HO
OH
Thursday, January 9, 14
Functional Group-Based
O
O
CO2Me
O
HO
OBn
HO
MeO2C
H
HO
Phragmalin-type Limonoids
Sarpong Group, Berkeley
Transform-Based
OH
Me
HO
OH
OH
Ouabagenin
Baran Group, Scripps
Structure-Goal
O
O
Me
HO
N
O
Thursday, January 9, 14
Me
()-Curvularin
()-Lycojapodine A
Estrone
Corey, E. J.; Ohno, M., Mitra, R. B.; Vatakancherry, P. A. J. Am. Chem. Soc. 1964, 86, 487.
Thursday, January 9, 14
Squalene
Werthermann, L.; Johnson, W. S.; Proc. Nat. Acad. Sci., 1970, 67, 1465.
Thursday, January 9, 14
benzyne acylalkylation
OH
OBn
Me
O
O
BnO
HO
O
Me
OR
RCM
Me
O
Me
O
Me
known acetate
Aldol
Thursday, January 9, 14
Me
Me
Me
Me
Br
3. Ac-Cl, pyr.
85%, >99% ee
Me
HMDS, THF 70 C;
THF, 78 C
HO
76%
(1:1)
HO
Me
2. DMP, CH2Cl2
57%
Thursday, January 9, 14
OBn
OBn
Me
TMS
CsF
OTf
MeCN, 40 C
O
O
BnO
30%
BnO
O
Me
Thursday, January 9, 14
OBn
OBn
Me
TMS
CsF
OTf
MeCN, 40 C
O
O
BnO
BnO
O
30%
OH
Me
Pd/C, H2
MeOH, THF
HO
60%
O
Me
()-Curvularin
Thursday, January 9, 14
Functional Group-Based
O
O
CO2Me
O
HO
OBn
HO
MeO2C
H
HO
Phragmalin-type Limonoids
Sarpong Group, Berkeley
Transform-Based
OH
Me
HO
OH
OH
Ouabagenin
Baran Group, Scripps
Structure-Goal
O
O
Me
HO
N
O
Thursday, January 9, 14
Me
()-Curvularin
()-Lycojapodine A
Implemented when a large number of target structures are desired (collective synthesis)
bulk of synthetic strategy relies on the synthesis of a highly simplifying intermediate
allows the implementation of multiple retrosynthetic techniques
common intermediate
tetracycle
Jones, S. B.; Simmons, B.; Mastracchio, A.; MacMillan, D. W. C. Nature, 2011, 475, 183.
Thursday, January 9, 14
Implemented when a large number of target structures are desired (collective synthesis)
bulk of synthetic strategy relies on the synthesis of a highly simplifying intermediate
allows the implementation of multiple retrosynthetic techniques
Cortisol
deoxycholic acid
targeted starting material
Fieser, L. F.; Fieser, M. Steroids Reinhold Publishing, New York, 1959. pp 645659.
Thursday, January 9, 14
Implemented when a large number of target structures are desired (collective synthesis)
bulk of synthetic strategy relies on the synthesis of a highly simplifying intermediate
allows the implementation of multiple retrosynthetic techniques
Buspirone
Fieser, L. F.; Fieser, M. Steroids Reinhold Publishing, New York, 1959. pp 645659.
Thursday, January 9, 14
Me
N
()-Lycojapodine A
fawcettimine-type alkaloid
OH
H
Me
N
(+)-fawcettimine
O
H
Me
N
(+)-fawcettidine
O
H
Me
O
(+)-lycoflexine
Me
N
OH
OH
(+)-alopecuridine
Li, H.; Wang, X.; Hong, B.; Lei, X. J. Org. Chem., 2013, 78, 800.
Thursday, January 9, 14
Me
carbon
O
skeleton
HO
N
H
lycolidine
biosynthetic common
intermediate
Thursday, January 9, 14
rearrangement
OH
H
Me
N
(+)-fawcettimine
Me
carbon
O
skeleton
HO
N
H
lycolidine
biosynthetic common
intermediate
Thursday, January 9, 14
rearrangement
OH
H
Me
N
(+)-fawcettimine
HCHO
condensation
Me
O
Me
carbon
O
skeleton
HO
N
H
lycolidine
rearrangement
OH
H
Me
N
HCHO
Me
O
condensation
(+)-fawcettimine
biosynthetic common
intermediate
O
H
Me
O
(+)-lycoflexine
Thursday, January 9, 14
Me
carbon
O
skeleton
HO
lycolidine
Me
N
H
OH
rearrangement
HCHO
Me
O
condensation
(+)-fawcettimine
biosynthetic common
H2O
intermediate
O
O
H
Me
N
(+)-fawcettidine
Thursday, January 9, 14
Me
O
(+)-lycoflexine
OH
H
Me
OH
(+)-alopecuridine
[O]
Me
carbon
O
skeleton
HO
lycolidine
Me
N
H
OH
rearrangement
HCHO
Me
O
condensation
(+)-fawcettimine
biosynthetic common
H2O
intermediate
O
O
H
Me
N
(+)-fawcettidine
Thursday, January 9, 14
Me
O
(+)-lycoflexine
OH
H
Me
OH
[O]
Me
H2O
(+)-alopecuridine
()-lycojapodine A
[O]
Me
carbon
O
skeleton
HO
lycolidine
Me
N
H
OH
rearrangement
HCHO
Me
O
condensation
(+)-fawcettimine
biosynthetic common
H2O
intermediate
O
O
H
Me
N
(+)-fawcettidine
Thursday, January 9, 14
Me
O
(+)-lycoflexine
OH
H
Me
(+)-fawcettimine
H
Me
O
Boc
Me
N
proposed common
intermediate
()-Lycojapodine A
O
H
Me
O
(+)-lycoflexine
Thursday, January 9, 14
OH
H
Me
intramolecular
alkylation
(+)-fawcettimine
H
Me
O
Boc
O
O
Boc
N
OTBDPS
N
Me
Me
N
OH
proposed common
intermediate
()-Lycojapodine A
O
O
H
Me
O
N
O
Me
MgBr
(+)-lycoflexine
Thursday, January 9, 14
Boc
OTBDPS
MgBr
O
Me
OTBDPS
Boc
N
94%
NEt3HF
OTBDPS
MeCN, rt
75%
OH
1. collidine, MsCl
CH2Cl2, 4 C
2. DMP, CH2Cl2
Me
Thursday, January 9, 14
Boc
OH
Boc
OH
Me
Boc
N
Me
OMs
Boc
NaI
Boc
OMs
acetone, rt.
Me
Me
84%
Boc
N
DBU
MeCN, rt.
Me
O
Me
Boc
Me
O
H
O
RBocN
65%
Thursday, January 9, 14
CHO
O
Me
Boc
OsO4, NaIO4
TMSO
2. TMSOTf, 2,6-lutidine
Me
CH2Cl2, 78 C
Boc
TMSO
Me
DABCO
Boc
dioxane/H2O
87%
SmI2 (5 equiv)
OH
TMSO
H
Me
Boc
Thursday, January 9, 14
1. TBAF, THF, rt
Me
OH
2. TPAP, NMOH2O
96%
Boc
4 MS, CH2Cl2, rt
80%
50%
OH
HO
O
O
H
Me
Boc
OH
TFA, CHCl3
then NaHCO3
94%
Me
TFA
OH
(+)-alopecuridineTFA
12 steps
Li, H.; Wang, X.; Hong, B.; Lei, X. J. Org. Chem., 2013, 78, 800.
Thursday, January 9, 14
HO
O
O
H
Me
Boc
OH
TFA, CHCl3
TFA
then NaHCO3
94%
Me
OH
(+)-alopecuridineTFA
12 steps
O
O
HO
H
Me
TFA
DMP, TFA
OH
4 MS, 30 C, 4 h
80%
Me
N
()-Lycojapodine A
13 steps
Li, H.; Wang, X.; Hong, B.; Lei, X. J. Org. Chem., 2013, 78, 800.
Thursday, January 9, 14
Functional Group-Based
O
O
CO2Me
O
HO
OBn
HO
MeO2C
H
HO
Phragmalin-type Limonoids
Sarpong Group, Berkeley
Transform-Based
OH
Me
HO
OH
OH
Ouabagenin
Baran Group, Scripps
Structure-Goal
O
O
Me
HO
N
O
Thursday, January 9, 14
Me
()-Curvularin
()-Lycojapodine A