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ABSTRACT: Matrix metalloproteinases (MMPs) are a family of nine or more highly homologous Zn++endopeptidases that collectively cleave most if not all of the constituents of the extracellular matrix. The present
review discusses in detail the primary structures and the overlapping yet distinct substrate specificities of MMPs
as well as the mode of activation of the unique MMP precursors. The regulation of MMP activity at the
transcriptional level and at the extracellular level (precursor activation, inhibition of activated, mature enzymes)
is also discussed. A final segment of the review details the current knowledge of the involvement of MMP in
specific developmental or pathological conditions, including human periodontal diseases.
KEY WORDS: matrix metalloproteinases, extracellular matrix, collagenase, regulation of tissue destruction,
human periodontal diseases.
Abbreviations used throughout the text are listed after the Acknowledgments section and before the reference list (page
231).
1045-4411/93/150
1993 by CRC Press, Inc.
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197
TABLE 1
Pathways for Metabolic Degradation of Extracellular Matrix
Pathway
Tissue degraded
Effector enzymes
Cellular location
Pig-dependent
pathway
Pin
Peri/extracellular
MMP pathway
MMPs
Peri/extracellular
Peri/extracellular
Phagocytic pathway
Cathepsins
Intraceliular
Osteoclastic pathway
Cathepsins
Peri/extracellular
198
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C. Phagocytic Pathway
The preponderance of evidence for degradation of extracellular matrix by a phagocytic pathway (reviewed by Melcher and Chan, 1981)
comes from ultrastructural studies that have unequivocally shown fragments of cross-striated
collagen fibrils completely enclosed inside cells
and in some cases associated with lysosomal
enzymes (Deporter and Ten Cate 1973, Garant
1976, Schellens et al, 1982). Although it has
been possible to replicate elements of this process in vitro (Yajima and Rose, 1977; Svoboda
et al\ 1979), it has not yet been possible to
clearly define the component molecular reactions. Selective inhibition studies suggest that
lysosomal cathepsins but not MMPs, are involved
in the process (Everts et a/., 1985, 1989, 1990).
At present it is difficult to reconcile the extracellular and intracellular pathways, but it is possible that fragments of fibrils may be excised
perhaps by a collagenase-dependent reaction and
that these fragments are subsequently internalized by the cell for digestion in phagolysosomes
mainly by thiol-proteinases of the cathepsin family. Phagocytic collagen degradation is particularly prevalent in areas of rapid collagen turnover such as the involuting uterus (Parakkal,
1969) and the periodontal ligament (Melcher
and Chan, 1981; Schellens et al, 1982). The
phenomenon has been identified in human and
animal periodontal ligaments in vivo (Listgarten,
1973; Melcher and Chan, 1981; Beertsen et al,
1978; Schellens et al, 1979), in healing wounds
(McGaw and Ten Cate, 1983), and in several
cultured cells including epithelial cells (Birek et
al, 1980), fibroblasts (Svoboda et al, 1979),
and macrophages (Parakkal, 1969; Deporter,
1979).
199
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200
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TABLE 2
Matrix Metalloproteinase Family
Enzyme
Abbreviation
Fibroblast-type
collagenase
FIB-CL
PMN-type
coliagenase
PMN-CL
Stromelysin-1
SL-1
MMP#
Mr
MMP-1
57,000/
52,000
MMP-8
75,000
Same as FIB-CL ( l l l l )
MMP-3
60,000
55,000
Stromelysin-2
SL-2
MMP-10
60,000/
55,000
Same as SL-1
Stromelysin-3
SL-3
MMP-11
n.d.
n.d.
Macrophage metalloelastase
MME
53,000
Elastin
Mr 72K gelatinase
type IV collagenase
Mr 72K GL
MMP-2
72,000
Mr 92K gelatinase/
type IV collagenase
Mr 92K GL
MMP-9
92,000
Putative metalloproteinase-1
PUMP-1
MMP-7
28,000
201
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PROTOTYPE
Fibronectin type II
Domain Inserts
MMP-9
Mr92KGL
MMP-2
Mr 72K GL
MMP-1
FIB-CL
MMP-8
PMN-CL
MMP-3
SL-1
MMP-10
a :: I II
I 11
MMP-11
MMP-?
MME
202
SL-3
PUMP-1
MMP-7
FIGURE 1.
SL-2
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TABLE 3
Asp- and Glu-Rich, Putative Ca2+-Binding Sequences
Sequence
Protein
DE H E R W T N N F T E
DD D E Q W T K D T T G
H-FIB-CL; site 1
H-SL-1
QD D 1 D G 1 Q A 1 Y G
QD D 1 N G 1 Q S L Y G
DS D D D G D D 1 T T 1
H-FIB-CL; site 2
H-SL-1
Sea urchin hatching
enzyme
EF
DV
DR
DL
DL
EK
DA
DK
N1
DD
DQ
DD~
DA
DD
S
N
T
D
D
D
D
D
Q
D
N
D
D
D
D
G
G
P
Q
G
G
G
G
G
N
R
D
_
D
D
D
D
N
N
N
N
D
D
D
D
D
1
D
G
G
G
G
G
G
G
C
G
G
G
G
T
L
R
Y
Y
T
T
Y
E
1
1
-
E
D
P
N
P
1
1
1
V
P
1
1
1
D
D
Q
D
D
T
D
S
N
D
D
D
-
F
L
E
V
L
T
F
A
Y
D
K
-
V
L
V
A
1
K
P
A
E
A
V
G
1
V
E
E
E
E
- D
D D
D E
T D D
FN-R 1
FN-R 2
FN-R 3
FN-R 4
FN-R 5
Calmodulin 1
Calmodulin 2
Calmodulin 3
Calmodulin 4
Thrombospondin
Myosin light chain
Troponin C consensus
Parvalbumin consensus
Uvomorulin Repeat B1
Lactalbumin
Catalytic Domain
Propeptide
FN-type II Inserts
Hinge Region
Pexin-like domain
HUMAN Mr 92K GL
L_13_
HUMAN Mr 72K GL
10
HUMAN FIB-CL
10
RAT SL-1
FIGURE 2.
Exon structure of human FIB-CL, Mr 72K GL, and Mr 92K GL and rat SL-1 (Redrawn from Huhtala,
P., A. Tuuttila, L. T. Chou, J. Lohi, J. Keski-Oja and K. Tryggvason: J. Biol. Chem. 266:16485-16490 (1991). With
permission.)
203
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204
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mesenchymal cells and keratinocytes. Transcription of MMP genes gives rise to mRNAs that are
relatively stable in the intracellular milieu, with
half lives ranging from 12 to 150 h (Brinckerhoff
etal, 1986; Overall etal, 1991a). Although most
of the regulatory mechanisms described in the
following are transcripional in nature, modulation
of mRNA half-life may also play a role.
Brinckerhoff et al. (1986) noted that FIB-CL
mRNA half-life in rabbit synovial fibroblasts
(t1/9 = 12 to 36 h) was significantly increased in
response to TPA, and Overall et al (1991a) found
that Mr 72K GL mRNA t1/2 in human fibroblasts
increased from 46 to 150 h after TGF-P stimulation, whereas those of CL (53 h) and tissue inhibitor of metalloproteinase-1 (TIMP-1) (60 h) remained unchanged.
TGF-P in fibroblasts (Kerr et al, 1988b) but stimulated in keratinocytes (Salo et al, 1991); human
rheumatoid synovial fibroblasts respond to IL-lp
by induction of SL-1, whereas TNF-a induces
primarily FIB-CL (MacNaul et al, 1990); TNFa, TGF-a, and EGF as well as 12-0-tetradecanoylphorbol-13-acetate (TPA) induce high-level expression of SL-1 in fibroblasts but SL-2 in
keratinocytes (Birkedal-Hansen et al., unpublished).
Several growth factor and cytokine regulatory pathways converge at the AP-1 binding site,
which also constitutes the phorbolester-responsive element (TRE) (Angel et al, 1987a,b).
AP-1 complexes are heterodimers of proteins of
the two proto-oncogene families (Jun and Fos)
that bind to a ATGAGTCA concensus sequence
in the 5' upstream flanking region (-70 bp of the
translation start site of the human FIB-CL gene).
Oncogene and phorbol ester induction of FIB-CL
proceeds along a c-fos dependent pathway
(Schonthal et al, 1988) as does the induction of
SL-1 by PDGF but not by EGF (Kerr et al,
1988a). AP-1 binding sequences have been identified in the 5' flanking region of the FIB-CL,
SL-1, and Mr 92K GL genes but are missing in the
Mr 72K GL gene (Angel et al, 1987b; Schonthal
et al, 1988; Huhtala et al, 1991). Based on the
observation that expression of SL-3 (Basset et al,
1990) and SL-2 genes (in human keratinocytes,
Birkedal-Hansen et al, unpublished) can be induced by TPA, we predict that these genes also
contain AP-1 binding sequences. Sirum and
Brinckerhoff (1989) identified a putative AP-1
binding site in the human fibroblast SL-2 promoter (ATGAATCA) but speculated that the single
base change at position 5 (A for G) and perhaps
a substitution of T for A in position 9 immediately
following the consensus sequence might account
for the apparent lack of response of this promoter
to TPA in fibroblasts. The promoter region of
the human keratinocyte SL-2 gene, which is
highly responsive to TPA, has not yet been analyzed. The AP-1 site is a necessary but not sufficient element for transcriptional activation of
FIB-CL/SL-1 genes (Auble and Brinckerhoff,
1991; Gutman and Wasylyk, 1990; Buttice et al,
1991). The FIB-CL promoter contains a TPAand oncogene-responsive unit (TORU) composed
of at least two elements, the AP-1 site and the
205
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TABLE 4
Stimulation and Repression of MMP Expression
Induction:
growth factors
and cytokines
IL-1 oc,p
TNF-oc
TGF-cc
EGF
PDGF
bFGF
NGF
TGF-p
Ref.
1, 2
2,3,4
5
6
6, 7
8, 9
10
11, 12
Induction:
other
Ref.
Repression
Ref.
TPA
Okadaic acid
Bacterial LPS
PGE2
Con A
cAMP
PTH
8, 13, 14, 15
16,
17, 18
19
20
21, 22
23
Glucocorticoids
Progesterone
1,24
25
9,26
27,28
29, 30
31,32
TGF-p
Retinoids
cAMP
IFN-y
Data from: (1) Frisch and Ruley, 1987; (2) MacNaul et al., 1990; (3) Dayer et al., 1985;
(4) Brenner et al., 1989b; (5) Lin and Birkedal-Hansen, unpublished; (6) Kerr et al., 1988a;
(7) Bauer et al., 1985; (8) Basset et al., 1990; (9) Edwards et al., 1987; (10) Machida et al.,
1991; (11) Salo et al., 1991; (12) Overall et al., 1991 a; (13) Aggeler et al., 1984; (14) Angel
etai, 1987a; (15) Wilhelm et al., 1989; (16) Kim et al., 1990; (17) Wahl et al., 1974; (18)
Cury etai, 1988; (19) Wahl et al., 1977; (20) Overall and Sodek, 1990; (21) McCarthy et
al., 1980; (22) Matrisian et al., 1986b; (23) Civitelli et al., 1989; (24) Jonat et al., 1990;
(25) Newsome and Gross, 1977; (26) Kerr et al., 1990; (27) Brinckerhoff, 1990; (28)
Nicholson etai., 1990; (29) Takahashi etai., 1991; (30) Kerr etai., 1988b; (31) Andrews
etai., 1990; (32) Wahl etai., 1990.
206
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2. Hormonal Regulation
Degradation of the extracellular matrix is
modulated by hormones in several developmentally regulated processes, and it is likely that
this effect is mediated via transcriptional regulation of MMP expression. Injection of rats
with estradiol immediately postpartum significantly slows and retards the loss of collagen
(Woessner, 1969; Ryan and Woessner, 1971,
1974). Somewhat at variance with these findings, Jeffrey and collaborators showed that
progesterone and the synthetic analogue
medroxyprogesterone, but not other reproductive hormones, inhibit production of collagenase in explants of uterine tissues (Jeffrey et
al, 1971a,b; Koob and Jeffrey, 1974).
Medroxyprogesterone is also a potent inhibitor
of matrix remodeling outside the uterus and
completely blocks neovascularization and
collagenolysis in rabbit cornea (Newsome and
Gross, 1977; Gross et al, 1981). FIB-CL synthesis by osteoblasts, UMR 106 osteosarcoma
cells, and whole calvaria is induced or stimulated by parathyroid hormone (PTH) and 1,25
dihydroxy vitamin D 3 (1,25 di(OH)D3) (Delaisse
et al, 1988; Civitelli et al, 1989, Quinn et al,
1990), but it is not quite clear to what extent
this response is linked to the bone-resorbing
activity of the hormones in vivo.
207
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sarcoma cells, and this effect has been attributed to a 19 amino acid sequence of the laminin
A chain (Turpeenniemi-Hujanen et al, 1986;
Kanemoto et al, 1990).
208
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E. Activation of Metalloproteinase
Precursors
The biologic activation of MMP is still incompletely understood. This gap in knowledge
represents perhaps the most important obstacle to
our understanding of how cells utilize
metalloproteinases to degrade the extracellular
matrix. A body of evidence suggests that the la-
CL(APMA)
FIGURE 3.
Latency/activation mechanism of human FIB-CL precursor. TRY:
trypsin cleavage site; PKK: plasma kallikrein cleavage site; CL (PKK, PL): autolytic
cleavage site following initial cleavage by plasma kallikrein or plasmin (PL); CL
(APMA): autolytic cleavage site following reaction with 4-aminophenylmercuric
acetate; SL: stromelysin cleavage site. Location of cleavage sites is from Suzuki,
K., J. J. Enghild, T. Morodomi, G. Salvesen, and H. Nagase: Biochemistry.
29:10261-10270 (1990).
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209
PROTEOLYTIC
ENZYMES
CONFORMATIONAL
PERTURBANTS
THIOL-REACTIVE AGENTS
LMW - ACTIVE
FIGURE 4.
Activation of MMP. The reversible opening of the cysteine switch plays a central
role in different activation pathways. The equilibrium may be shifted towards the open form by
proteolytic cleavage of the propeptide (left column) or by reaction of the propeptide Cys residue
with metal ions, organomercurials, oxidizing agents, and thiol reagents (right column).
210
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NH 2 -terminus
Catalytic Domain
PKK TRY, PKK
CL(PKK,PL) CL(A?MA)
CL(APMA)
FPATLETQEQDVDLVQKYLEKYYNLKNDGRQVEKRRNSGPVTO^
FIB-CL
SL-1
HNE
CT I PKK
i\\r
SL-l(APMA)
S L-1
YPLDGAARGEDTSM^VQKYLENYYDLKKDVKQFVRRKDSGPWKK
Exogenous
Proteinase
Clevage Site
SL-1
Autolytic
Cleavage
Sitel
Autolytic
Cleavage
Site 2
FIGURE 5.
Propeptide cleavages associated with activation of human FIB-CL and SL-1. Arrows identify
cleavage sites by exogenous proteinases (plasma kallikrein [PKK], trypsin [TRY], chymotrypsin [CT], human
neutrophil elastase [HNE], and human stromelysin-1 [SL-1]) and autolytic cleavage sites after activation is
initiated either by plasma kallikrein (CL [PKK]) or APMA (CL [APMA]; SL-1 [APMA]). Data from Suzuki, K., J. J.
Enghild, T. Morodomi, G. Salvensen and H. Nagase: Biochemistry. 29:10261-10270 (1990) and Nagase, H.,
J. J. Enghild, K. Suzuki and G. Salvesen: Biochemistry. 29:5783-5789 (1990).
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CL, which has a 5 to 8-fold higher catalytic activity than either of the other two forms (Susuki
et al9 1990). These findings have prompted speculation about whether SL plays a role in the biologic activation of proFIB-CL, but the question
has not yet been resolved fully.
In the continuing search for a general, biologically relevant MMP activation mechanism,
the short basic propeptide sequences that are the
sites for the initial cleavage in trypsin/Pln-induced
activation of FIB-CL and SL-1 have attracted
considerable attention (Grant et al, 1987; Stricklin
TABLE 5
Human MMP Sequences Surrounding the Autolytic Activation Sites
K V M K Q P R C G V P D V A Q - - D
E
E
S
E
E
K
M M K K P R C G V
V M R K P R C G V P
V M R K P R C G V
S L R P P R C G V P
I M Q K P R C G V
T M R K P R C G N
*A*M R T P R C G V
P D
D V
P D
D P
P D
P D
P D
S
G
V
S
V
V
L
G
H
G
D
A
A
G
G - - - - - - - _ _ _ _ _ _ _
H - - - - - - G L S A R N R
E - - - - - - N - - - - - - R - - - - - - -
F *V *L T E G N P R W FIB-CL
- - F M * L T P G N P K W
PMN-CL
SL-1
_ _ *F R T F P G I P K W
- - - F S S F P
G M P K W SL-2
Q K R F V L S G G - R W SL-3
- - - Y S L F P N S P
K W PUMP-1
- -*Y N F F P R K P
K W M f 7 2 KG L
- - - F Q T F E G D L
K W M r 92K GL
Note: Asterisks indicate autolytic cleavage sites verified by sequence analysis. The NH2-terminal sequences of the
autolytic activation products of SL-2, SL-3, and PUMP-1 are not known.
Data from: FIB-CL: Grant, G. A., A. Z. Eisen, B. L Marmer, W. T. Roswit and G. I. Goldberg: J. Biol. Chem.
262:5886-5889 (1987); Suzuki, K., J. J. Enghild, T. Morodomi, G. Salveson, and H. Nagase: Biochemistry.
29:10261-10270 (1990); PMN-CL: Mallya, S. K., K. A. Mookhtiar, Y. Gao, K. Brew, M. Dioszegi, H. Birkedal-Hansen
and H. E. Van Wart: Biochemistry. 29:10628-10634 (1990); SL-1: Nagase, H., J. J. Enghild, K. Suzuki, and G.
Salveson: Biochemistry. 29:5783-5789 (1990); Mr72K GL: Stetler-Stevenson, W. G., H. C. Krutzsch, M. P. Wacher,
I. M. K. Margulies, and L. A. Liotta: J. Biol. Chem. 264:1353-1356 (1989a); Mr 92K GL: Wilhelm, S. M., I. E. Collier,
B. L. Marmer, A. Z. Eisen, G. A. Grant and G. I. Goldberg: J. Biol. Chem. 264:17213-17221 (1989); Tschesche,
H., V. Knauper, S. Kramer, J. Michaelis, R. Oberhoff and H. Reinke: Matrix. Spec. Suppl. No. 1: 245-255 (1992).
et al, 1983; Suzuki et al, 1990). Sequences surrounding the trypsin-sensitive site are only partially conserved, and it is not immediately apparent why some but not all MMPs are amenable to
activation by trypsin and Pin (Appendix 1). For
example, PUMP-1 (KNAN) is activated quite well
by trypsin, PMN-CL (RKNG) and M 92K GL
(KSLG) are activated only slowly, and Mr 72K
GL (KDTL) not at all under the same conditions.
The observation that activation of SL-1 also may
be initiated by cleavage by chymotrypsin (PheVal) and human neutrophil elastase (Val-Arg)
suggests that the conformation around this site
in addition to its sequence plays an important
role in encoding the susceptibility to proteolysis.
The question of whether cultured cells that secrete the proenzymes possess all of the necessary
components to complete their activation has not
been fully resolved. In fact, it has even proven
quite difficult to achieve MMP activation in cell
culture systems without addition of exogenous
proteinases such as Pig or trypsin. MMP precur-
212
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sors secreted in cell culture "spontaneously" activate very slowly, if at all, even at elevated temperatures, perhaps because of coexpression of
MMP inhibitors (TIMP-1 and TIMP-2). In fibroblast cultures, partial activation of precursors of
FIB-CL and of Mr 72K GL may be achieved by
addition of the ionophore A23187 (Unemori and
Werb, 1988) and by Concanavalin A (Con A)
(Overall and Sodek, 1990; Ward et ai, 1991).
The latter investigators also provided evidence
that activation of the Mr 72K GL is mediated by
a cell surface bound "activator". Our own studies
have shown that activation of proFIB-CL in serum-free cultures of fibroblasts (which express
SL-1) and of keratinocytes (which express SL-2)
is very slow and incomplete for the first 3 to 5 d
of incubation and that collagen breakdown is
blocked during that period (Birkedal-Hansen et
al., 1992b; Birkedal-Hansen et a/., 1989; Lin et
aL, 1987; Lyons et a/., 1991a).
The degree of overlap between the Pig- and
metalloproteinase-dependent pathways, in general,
and the role of Plg/Pln in the metabolic activation
of MMP precursors, in particular, remain uncertain. Several studies using in vitro model systems
suggest that MMP-dependent proteolysis is greatly
accelerated in the presence of Pig (Mignatti et aL,
1986, He et al, 1989; Birkedal-Hansen et al.y
1992b). The stimulating effect of Pig, while not
analyzed fully in detail, is believed to reside in the
ability of Pin to initiate the autolytic activation of
several MMP zymogens, including FIB-CL and
SL-1. The reluctance to accept a generalized model
for pericellular proteolysis of extracellular matrix
substrates in which Plg/Pln play a role is focused
on two major points: (1) the lack of specificity of
Pin cleavage reactions is not easily reconciled
with the fact that most regulatory proteinase cascades are composed of highly specific enzymes
and (2) several MMPs are not activated by Pin.
Moreover, examples do exist of cells that degrade
model matrices by seemingly Pig-independent
processes. Such is the case for the degradation of
gelatin and collagen by PMN leukocytes (Peppin
and Weiss, 1986; Weiss et a/., 1985). These investigators provided strong evidence that, at least
in the PMN leukocyte, activation of PMN-CL and
Mr 92K GL may be achieved by oxidative pathways, presumably by oxidation of the unpaired
propeptide Cys residue by HOC1.
213
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TABLE 6
Collagenase Cleavage Sites in Interstitial Coiiagens
Substrate
Calf and chick cc1(l)
Calf o2(l)
Chick o2(l)
Human oc1 (II)
Human a1(lll) (skin)
Human oc1 (III) (liver)
Calf a1 (III)
Sequence
Gly-Pro-Gln-Gly-Ile-Ala-Gly-Gln
Gly-Pro-Gln-Gly-Leu-Leu-Gly-Ala
Gly-Pro-Gln-Gly-Ile-Leu-Gly-Ala
-Ile-Ala-Gly-Gln
-Leu-Ala-Gly-Leu
Gly-Pro-Leu-Gly-Ile-Ala-Gly-Ile
Gly-Pro-Leu-Gly-Ile-Ala-Gly-Leu
Ref.
1,2,3
4
5
6
7
8
6
Data from: (1) Gross etal., 1974; (2) Highberger etal., 1982; (3) Glanville et
al., 1983; (4) Bomstein and Traub, 1979; (5) Dixit etal., 1979; (6) Miller et
al., 1976; (7) Seyer and Kang, 1981; (8) Lang etal., 1979. (Modified from
Netzel-Arnett, S., G. Fields, H. Birkedal-Hansen and H. E. Van Wart: J. Biol.
Chem. 266:6747-6755 (1991a).
214
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30C). For most species, there is in essence a tenfold difference between collagen types III and I
(=300 hr1 and =30 h"1) and again between collagen types I and II (-30 h"1 and - 3 h"1). The
cleavage of interstitial collagens is highly temperature-dependent particularly in the
subdenaturation temperature range (Tm = 40 to
42C). A rise in temperature between 25 to 30C
and 35 to 37C increases the rate of cleavage of
type I collagen by 50 to 80-fold (16 to 53 h"1 vs.
1600 to 1700 tr 1 ) and all but eliminates the rate
difference between types I and type III collagens.
It is also apparent that native triple helical collagen (1600 to 1700 h"1) is a much better substrate
than denatured collagen (230 to 750 h"1) at the
same temperature (37C). Not only is the rate of
cleavage 2 to 7-fold higher, but kM is 4 to 8-fold
lower so that, based on kcat/KM comparisons, triple
helical type I collagen is a 10 to 60-fold better
substrate for FIB-CL than either of its component
random coil a-chains. The rates of cleavage of
reconstituted fibrillar substrates are much lower
than those of soluble collagen molecules. At 35 to
37C, both type I and III collagen fibrils are cleaved
at rates in the range of 11 to 60 h"1 when compared with 1600 to 1700 hr1 for the same collagens in solution. It is likely that this difference
is due in part to the increased thermal stability of
fibrillar structures (Tm flbnls = 47 to 49C; Tm sol =
40 to 41C) (Birkedal-Hansen et al, 1985). It is
interesting to note that the difference in catalytic
rates between types I and III collagen, which
exists at 25 to 30C, all but disappears at 35 to
37C whether in soluble or fibrillar form. The
data shown in Table 7 also reveal several interesting species differences, particularly with respect
to cleavage of type III collagen. Whereas human,
dog, and cat type III collagens are cleaved very
rapidly (350 to 627 h"1), those of guinea pig and
chick are not; in fact, chick type III collagen is
cleaved about as slowly as collagen type II. PMNCL is a considerably more efficient enzyme (10 to
30-fold) than FIB-CL on virtually all substrates
except for type III collagen (Hasty et al, 1987;
Netzell-Arnett et al., 1991a). A comparison of the
catalytic properties of FIB-CL and PMN-CL is
shown in Table 8. The proteolytic activity of collagenases is not limited to collagen and collagenlike synthetic peptides. Recent studies have shown
the collagenases cleave a variety of susceptible
215
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TABLE 7
Catalytic Properties of Human Fibroblast-Type Coliagenase
kcat(h"1)
16
19.5
44
53.4
34.2
22.5
32.2
22.8
35.1
3.2
2.7
1.0
4.5
350
565
472
627
18.0
5.4
1653
1477
13.1
45.7
53.9
60.7
4.1
0.9
11.4
21.0
25.0
1700
230
750
24
420
160
730
970
1200
4500
1739
2.1
K M (HM)
0.8
0.9
0.8
0.8
0.8
0.9
1.5
1.1
1.0
2.4
1.6
2.1
1.1
1.7
1.4
1.1
1.8
0.7
1.2
n.d.
n.d.
n.d.
n.d.
n.d.
n.d.
n.d.
n.d.
n.d.
n.d.
n.d.
0.9
7.0
3.7
9.8
n.d.
710
3300
2800
3600
2800
0.17
0.32
1(
c A P
'
1 h
"
1 )
Temp. (C)
Ref
30
25
30
25
25
25
25
25
25
30
25
25
25
30
25
25
25
25
25
35
35
35
37
37
37
37
37
35
37
37
37
37
37
30
30
30
30
30
30
30
25
25
1
2
1
2
2
2
3
3
3
1
2
2
2
1
2
3
3
2
3
4
4
4
3
3
3
3
3
4
3
5
6
6
6
7
8
7
9
9
9
10
11
11
19.0
21.7
54.0
66.8
42.8
25.0
21.5
20.7
35.1
1.3
1.7
0.48
4.1
205.9
403.6
429
348
25.7
4.5
n.d.
n.d.
n.d.
n.d.
n.d.
n.d.
n.d.
n.d.
n.d.
n.d.
n.d.
1888.9
32.9
202.7
2.5
n.d.
0.23
0.22
0.35
0.33
1.6
10229
6.6
216
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TABLE 8
Kinetic Parameters for the Hydrolysis of Soluble Types I, II, and III Collagens and
Synthetic Peptides by Human FIB-CL and PMN-CL at 30 C
FIB-CL
Substrate
Rat type 1
Human type 1
Calf type II
Human type III
GPQGIAGQ
GPQAIAGQ
cat h " 1
KM,M
16
44
3.2
350
730
4,500
PMN-CL
Kcat/KM,M-h-i
0.8
0.8
2.4
1.7
3,300
2,800
19
54
1.3
210
0.22
1.6
690
460
130
1.0
1.0
2.3
200
39,000
87,000
2.5
6,900
4,800
690
460
57
80
5.7
18
From Netzel-Arnett, S., G. Fields, H. Birkefal-Hansen and H. E. Van Wart: J. Biol. Chem.
266:6747-6755 (1991a).
B. Stromelysins
The stromelysin group of MMPs includes at
least two members, SL-1 and -2. It is more uncer-
TABLE 9
Collagenase Cleavage Sites in Noncoilagenous Proteins
Substrate
Sequence
Ref.
Human oc2-M
Human PZP
Human PZP
Human PZP
Rat a1 M
Rat ot1 M
Rat a2M
Rat oc2M
Rat a1-l3, variant 2
Gly-Pro-Glu-Gly-Leu-Arg-Val-Gly
Tyr-Gly-Ala-Gly-Leu-Gly-Val-Val
Ala-Gly-Leu-Gly-Val-Val-Glu-Arg
Ala-Gly-Leu-Gly-Ile-Ser-Ser-Thr
Glu-Pro-Gln-Ala-Leu-Ala-Met-Ser
Gln-Ala-Leu-Ala-Met-Ser-Ala-Ile
Ala-Ala-Tyr-His-Leu-Val-Ser-Gln
Met-Asp-Ala-Phe-Leu-Glu-Ser-Ser
Glu-Ser-Leu-Pro-Val-Val-Ala-Val
1
1
1
1
1
1
1
1
1
Ser-Ala-Pro-Ala-Val-Glu-Ser-Glu
Pro-Val-Gln-Pro-Ile-Gly-Pro-Gln
Asp-Val-Ala-Gln-Phe-Val-Leu-Thr
Val-Ala-Gln-Phe-Val-Leu-Thr-Glu
Ala-Gln-Phe-Val-Leu-Thr-Glu-Gly
Gly-X -Phe-Met-Leu-Thr-Pro-Gly
Gly-Ala-Met-Phe-Leu-Glu-Ala-Ile
Glu-Ala-Ile-Pro-Met-Ser-Ile-Pro
Leu-Leu-Ser-Ala-Leu-Val-Glu-Thr
Leu-Asn-Ala-Gly
1
2
3
3
3
4
5, 6
6, 7
5, 6
8
217
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TABLE 10
Stromelysin Cleavage Sites in Natural Proteins
Substrate
SL-1
SL-1
PG core protein
PG link protein,
human
PG link protein,
rat
ori-PI
a1-ACT
AT-III
Sb P
cc2M
cc2M
Ovostatin
Sequence
Asp-Thr-Leu-Glu-Val-Met-Arg-Lys
Asp-Val-Gly-His-Phe-Arg-The-Phe
Ile-Pro-Glu-Asn-Phe-Phe-Gly-Val
Arg-Ala-Ile-His-Ile-Gln-Ala-Glu
Ref.
1
1
2
3
His-Ile-Gln-Ala-Glu-Asn-Gly-Pro
Glu-Ala- Ile-Pro-Met- Ser-Ile-Pro
Leu-Leu- -Ser-Ala-Leu- Val-Glu-Thr
Ile-Ala- Gly-Arg-Ser- Leu-Asn-Pro
Lys-Pro- Gln-Gln-Phe- Phe-Gly-Leu
Gly-Pro- -Glu-Gly-Leu- Arg-Val-Gly
Arg-Val- Gly-Phe-Tyr- Glu-Ser-Asp
Leu-Asn- Ala-Gly-Phe- Thr-Ala-Ser
4
4
4
5
6
6
6
SL-1 is expressed by stromal cells either constitutively or after induction by growth factors/
cytokines (IL-1, EGF, TNF-oc, PDGF) or phorbol
esters (Chin et al, 1985; Herron et al, 1986;
Wilhelm et al, 1987). The enzyme does not appear to be expressed by PMN leukocytes and
SL-2 transcripts in Rous sarcoma virus transformed rat embryo fibroblasts. Moreover, SL-2
transcripts were inducible by TPA in the rat in the
presence of some, but not all, fetal bovine sera.
We have recently observed that TPA, TGF-a,
TNF-a, and EGF, which induce expression of the
218
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SL-1 gene in human fibroblasts, induce expression exclusively of the SL-2 gene in human
keratinocytes (Birkedal-Hansen et ai, unpublished).
C. Gelatinases/Type IV Collagenases
The Mr 72K GL is perhaps the most widely
distributed of all MMP and has been identified in
skin fibroblasts (Seltzer etai, 1981), keratinocytes
(Salo et ai, 1991), chondrocytes (Lefebvre et ai,
1991), endothelial cells (Kalebic et ai, 1983),
monocytes (Garbisa et ai, 1986), osteoblasts
(Overall and Sodek, 1987), and in a number of
other normal and transformed cells (Sang et ai,
1990; Arthur et ai, 1989; Liotta et ai, 1979; Salo
et ai, 1983). Mr 72K GL does not appear, however, to be expressed by PMN leukocytes but is
present in a circulating form in plasma (Johansson
and Smedsrod, 1986). The Mr 92K GL is produced by keratinocytes (Wilhelm et ai, 1989;
Salo et ai, 1991), monocytes and alveolar macrophages (Mainardi et ai, 1984), PMN leukocytes (Hibbs et ai, 1985; Murphy et ai, 1989a)
and in a number of malignant or transformed cells
(Lyons et ai, 1991a; Wilhelm et ai, 1989; Moll
et ai, 1990, Davis and Martin, 1990). It is interesting to note that PMN, which express a unique
and distinct collagenase gene, utilize the same
gene for the Mr 92K GL, although in a manner
that yields a storable rather than a secreted gene
product.
The two gelatinases are similar in many characteristics, including high affinity for gelatin both
in the latent and activated form. The main structural difference is the extended 54 amino acid
hinge region sequence in the Mr 92K GL that
shares some homology with the oc2 chain of type
V collagen (Wilhelm et ai, 1989) (Appendix 1).
Another difference is that the Mr 72K GL precursor is tightly associated with TIMP-2, whereas
the Mr 92K GL proenzyme is associated with
TIMP-1 (Goldberg et ai, 1989; Wilhelm et ai,
1989). Howard et ai (1991a) showed that TIMP2 remained bound to the gelatinase even after
mercurial activation, but was able to retard
autoactivation.
Mr 72K GL is expressed constitutively by
most cells in culture but is only moderately responsive (two- to four-fold) to TPA and growth
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TABLE 11
Mr 72K GL Cleavage Sites
Sequence
Ref.
1
1
1
1
1
1
1
1
1
2,3
Substrate
Gelatin,
Gelatin,
Gelatin,
Gelatin,
Gelatin,
Gelatin,
Gelatin,
Gelatin,
Gelatin,
Mr 72K
oc1(l)-CB8
oc1(l)-CB8
a1(l)-CB8
oc1(l)-CB8
oc1(l)-CB8
a1(l)-CB8
cc1(l)-CB7
cc1(l)-CB7
oc1(l)-CB7
GL
D. Other MMPs
SL-3 has been studied only at the message
level. SL-3 mRNA is expressed in human mammary tumors by mesenchymal cells adjacent to
invading epithelial tumor cells. The observation
that mRNA transcripts could be induced by TPA
and by growth factors in embryonic fibroblasts
suggests that the transcriptional regulation of this
enzyme is similar to that of FIB-CL, SL-1, and Mr
92K GL. The enzyme protein has not yet been
identified or isolated, but the deduced amino acid
sequence is consistent with the notion that it encodes a functional metalloproteinase. SL-3 has
the same principal domain structure as FIB-CL,
SL-1, and SL-2 but differs by an insert of 10
residues at the autolytic activation site (Basset et
al., 1990) (Table 5).
PUMP-1, which lacks the entire pexin-like
domain as well as the hinge region, cleaves a
wide range of substrates including fibronectin,
laminin, casein, gelatin, and proCL. The only
existing sequence information comes from cleavage of the insulin P chain (Woessner and Taplin,
1988):
FVNQHLCGSHLVEALYLVCGERGFFYTPKA
PUMP-1 cleaves Ala14-Leu15 and Tyr16-Leu17 in
the middle of the p chain. The enzyme is expressed in gingival fibroblasts (Overall and Sodek,
1991a) and has been isolated from the involuting
rat uterus and from rectal carcinoma cells
220
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like domain is abolished by site-directed mutagenesis, the activity against casein is only moderately
affected but collagen-cleaving activity is lost
(Windsor et al, 1991). Collier et al (1992) recently made alanine scanning mutations in the
fibronectin type II domains of the human 92K
GL. Several of these mutations destroyed gelatinbinding properties but did not adversely affect the
rate of cleavage of gelatin. This observation suggests that the gelatin-binding domains are not
required for catalytic activity against unfolded
collagen chains.
V. INHIBITION OF
METALLOPROTEINASE ACTIVITY
A. Synthetic Inhibitors
Chelating agents that interact with (or remove)
Zn2+ at the active site such as 1,10-phenanthroline
and EDTA are potent inhibitors of MMP but show
little if any selectivity and are therefore of limited
analytical or therapeutic potential. Several approaches have been employed to utilize substrate
specificity information to generate more selective
inhibitors based, in general, on synthesis of short
substrate analogue peptide sequences linked to
suspected chelating moieties such as hydroxamate,
thiol, phosphonamidate, phosphinate, and
phosphoramidate groups. The most potent of these
have reached ICs in the low nanomolar range. A
Leu-Phe-Ala thiol derivative synthesized by Gray
etal. (1986, 1987):
HS-CH 2 -(R,S)-CH-[CH 2 -CH(CH 3 ) 2 ]-CO-L-Phe-L-Ala-NH 2
Replacement of the chelating moiety with disulfide, sulfonate, sulfinate, sulfide, sulfoxide, and
221
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napthoyl-Glyp-cLeu-Trp-NHBzl
with K{ values near 10 nM (Galardy et al, 1992).
Tetracyclines and certain synthetic analogues
without antibiotic activity inhibit PMN-CL with
Kj in the micromolar range (Golub et al, 1983,
1985, 1987). The mechanism of inhibition is not
known, but it is suspected that it depends on the
chelating properties of the compounds. Tetracyclines are considerably less effective against FIBCL, but the reason for this selectivity is not known.
MMP inhibitor efficacy has mostly been determined with isolated enzyme preparations but a
number of studies suggest that these inhibitors
may have utility also in cell- or organ-based systems and may ultimately have therapeutic potential in intact organisms. A synthetic collagenase
inhibitor, ^-[-^-(benzyloxycarbonyO-amino-1 (R)-carboxypropyl]L-Leu-Tyr(OMe)-NHMe(CI1; SC 40827), produced by Searle, inhibits ovulation in perfused rat ovaries, whereas its inactive
(S) stereoisomer (CI-2; Searle SC40844) does not
(Brannstrom et al, 1988). This inhibitor also
blocks bone resorption in tissue culture (Delaisse
et al, 1985). Librach et al (1991) showed that a
222
B. Inhibiting Antibodies
Production of blocking antibodies represents
another attractive approach to the design of effective and specific inhibiting reagents. Affinitypurified polyclonal antibodies as well as monoclonal antibodies are both highly effective and
attain IC50 in the 1 to 10 |ug/ml range (20 to 200
nM). The best of these are almost as potent as
good synthetic inhibitors and are frequently highly
specific and readily discriminate between closely
related enzymes such as FIB-CL and PMN-CL
(Birkedal-Hansen etal, 1988). The production of
inhibiting monoclonal antibodies has been successfully accomplished for FIB-CL, Mr 72K GL,
and Mr 92K GL (Hoyhtya et al, 1988; BirkedalHansen et al, 1988; Hoyhtya et al, 1990; Lyons
etal, 1991a). The inhibition obtained with monoclonal antibodies to collagenase on collagenous
substrates is virtually complete (>90%) but similar antibodies against GLs on gelatin substrates
appear to be less effective (40 to 60% inhibition)
(Hoyhtya et al, 1988; Birkedal-Hansen et al,
1992c). Inhibiting antibodies have been shown to
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C. a-Macroglobulins
a-Macroglobulins inactivate susceptible proteinases by entrapment following cleavage of the
bait region (Sottrup-Jensen, 1989). The proteinase cleaves one or more bonds in the 40 residue
bait region and thereby initiates a conformational
change that leads to entrapment of the proteinase
(Sottrup-Jensen et al, 1989). In all a-macroglobulins except chicken ovostatin, this conformational change leads to hydrolysis of one internal
thiolester bond [-C(=O)-S-] per subunit and to
generation of a highly reactive glutamyl residue
(Sottrup-Jensen et al, 1989). The nascent glutamyl
residue reacts with a lysyl side chain exposed on
the surface of the attacking proteinase to covalently
cross-link the proteinase to the inhibitor by an
-lysyl-y-glutamyl bond.
Pro-Tyr-Gly-Cys-Gly-Glu-Glu-Asn-Met-Val
i
I
oo
Pro-Tyr-Gly-Cys-Gly-Glu-Glu-Asn-Met-Val
I
I
SH
OO
I
NH
I
Proteinase
Sottrup-Jensen et al. (1983) identified five lysine
residues located on patches on opposite sides on
the surface of the molecule as targets for e-lysyly-glutamyl crosslinks in the ct2M-trypsin complex. The trapping mechanism does not block the
active site per se and still permits access of lowmolecular-weight substrates. On high-molecularweight substrates, however, inhibition is complete because of steric hindrance. Although covalent capture following the initial entrapment appears to be an integral part of the inhibition mechanism by a2M, evidence suggests that the covalent
cross-linking of the proteinase is not necessary
223
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tr,pl,th,
su,st,tl
su,sb
he pa
ETVR
tr,th,pa,
ct,pe,su,tl
pe,pa
Rat al-M
tl,pa,th
Ct,8U |
J pa su
pa I
8U,tl
I FIB-CL |
ii
sp
I I
PKVCtERLRDNKGIPAAYHLVSQSHMDAFLESSESPT
ct, su
RataiD
sp
PRYC|PMYQAYPPLPYVGEPQALAMSAI PGAGYRSSNIRTSSMMMMGASEVAQEVEVRJETVR
tr,th
Rat cc2-M
su
ETRR
pe
ii
PTYC|SFTDYDMVPLAVPAVALDSSTDRGMYESLPVVAVKSPLPQEPPRKDPPPKDPVI|ETIR
variant 2
ct,su
Rat alI3
variant 1
I FIB-CL [
tr,tb
sp
pe,ct
pe tr
I II I
PTYC -YEMNMWLSAPAVESELSPRGGEFEMMPLGVNKSPLPKEPPRKDPPPKDPVItETIR
FIGURE 6. Proteinase cleavage sites in a-macroglobulins. Boxes delineate bait regions. Location of cleavage
sites is from Sottrup-Jensen, L , 0 . Sand, L. Kristensen and G. H. Fey: J. Biol. Chem. 264:15781-15789 (1989),
Sottrup-Jensen, L. and H. Birkedal-Hansen J. Biol. Chem. 264:393-401 (1989), and Enghild, J. J., G. Salvesen, K.
Brew and H. Nagase: J. Biol. Chem. 264:8779-8785 (1989). cc: Clostridium histolyticum collagenase; eg: human
cathepsin G; cs: bovine chymosin; ct: bovine chymotrypsin; he: human PMN elastase; pa: papain; pe: porcine
pancreatic elastase; pi: human plasmin; sb: Streptomyces griseus proteinase B; sp: Staphylococcus aureus
proteinase; st: Streptomyces griseus trypsin; su: subtilisin Novo; th: bovine thrombin; tl: thermolysin; tr: bovine
trypsin.
224
D. TIMPs
TIMPs form classic noncovalent bimolecular
complexes with the active forms of MMPs and
under certain circumstances with their latent forms
as well (as follows). TIMPs inhibit the activity of
the fully competent MMP and also appear to block
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225
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FIGURE 7.
Primary structure and disulfide bond assignment of human TIMP-1 and TIMP-2. Sequence data are from
Appendix 2. Disulfide bond assigment of TIMP-1 is from Williamson, R. A., F. A. 0. Marston, S. Angal, P. Koklitis, M.
Panico, H. R. Morris, A. F. Came, B. J. Smith, T. J. R. Harns and R. B. Freedman: Biochem. J. 268:267-274 (1990).
Proposed disulfide assignment of TIMP-2 is based on homology with TIMP-1.
7. Complex Formation
The noncovalent bimolecular complexes
formed between TIMP-l/TIMP-2 and catalytically active MMPs are entirely different from the
covalent complexes formed with oc-macroglobulins by the "venus-fly trap" mechanism described
in an earlier section (Stetler-Stevenson et al,
226
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227
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MMPs in these processes is based on identification of MMPs and inhibitors, or their transcripts,
during particular stages of development or on
perturbation or covariation studies that have shown
that modulation of expression of either the process or the gene product affects the other. For
example, Delaisse et al (1988) showed that PTH
(and several other resorption-inducing agents) at
the same time increased the rate of resorption of
cultured calvaria and the level of collagenase activity that can be extracted from the specimens. In
a few cases, functional blocking experiments using synthetic MMP inhibitors have strengthened
the evidence, that is, by inhibition of ovulation in
perfused rat ovaries (Brannstrom et al, 1988), of
resorption of bone explants (Delaisse et al, 1985),
and of trophoblast invasion in vitro (Librach et
al, 1991).
228
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1. Stromelysins
Transin (rat SL-1) mRNA was first discovered in transformed cells by a subtraction hybridization approach (Matrisian et al, 1985, 1986a).
A number of studies have suggested that SLs are
expressed more abundantly in malignant than in
benign tumors or normal tissues from the same
location. Breathnach and collaborators found SL
message in eight of nine murine squamous cell
carcinomas induced by carcinogen treatment
(Matrisian et al, 1986a) and showed that SL transcript levels are elevated in invasive, nonmetastatic
mouse skin carcinomas when compared with normal skin (Ostrowski et al, 1988). The authors
also reported that highly metastasizing tumors
generated by repeated carcinogen treatment
showed uniformly high levels of SL-1 message.
The incidence of SL expression in human
tumors varies greatly with tumor type. Muller et
al (1988) found that 6 of 50 primary carcinomas
contained SL transcripts. No SL message was
found in any of 32 adenocarcinomas or in two
sarcomas, nor were SL transcripts detected in any
"normal" tissues. The authors also noted that tumors that contained SL transcripts appeared to be
rapidly evolutive and poorly differentiated. Although no attempt was made to systematically
discriminate between SL-1 and SL-2 transcripts,
screening of a pool of mRNAs from all positive
tumors revealed that SL-2 mRNA was four to five
times more abundant than that of either SL-1 or of
two other members of the MMP gene family,
collagenase and PUMP-1.
2. Gelatinases/Type IV Collagenases
Expression of Mr 72K GL and Mr 92K GLs is
often associated with invasive and metastatic tumors (Liotta et al, 1979, 1980; Garbisa et al,
1987; Nakajima et al, 1987; Bernhard et al,
1990). The observation that GLs cleave soluble
type IV collagen (Salo et al, 1983, 1985) has
raised the question of whether these enzymes play
a role in the biologic degradation of basement
membranes and thereby endow cells with invasive
properties. Recent studies seem to indicate that
intact type IV collagen is much less susceptible to
GLs(Mackay?ftf/., 1991; Chen et al, 1991), and
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229
by expression of MMPs by the tumor cells themselves (SL-1 in carcinogen-induced mouse squamous cell carcinomas; PUMP-1 in prostate
adenocarcinomas) or by induction of MMP in
adjacent stromal cells (SL-3 in human breast carcinomas). These findings are of considerable interest because they suggest that tumor cells may
orchestrate remodeling of the extracellular matrix
not only by expression of MMP but also by inducing MMP expression in adjacent stromal cells.
D. Inflammatory Diseases
1. Rheumatoid Arthritis
The continuous or intermittent destruction of
rheumatoid joints has been the subject of several
investigations aimed at establishing a link between disease progression and MMP expression.
Several studies have shown increased collagenase activity in rheumatoid synovial fluids (Harris et al, 1969; Cawston et al, 1984; Hayakawa
et al, 1991) and in culture media from rheumatoid synovial tissues and cells (Evanson et al,
1968; Woolley etal, 1978; McNaul etal, 1990).
Collagenase and SL-1 have been identified near
the areas of destruction at the cartilage-pannus
junction and in the synovial lining cells (Woolley
etal, 1977; Okadaef a/., 1989,1990; McCachren
et al., 1990). In a comparative study, Case et al.
(1989a) found higher levels of SL-1 mRNA and
protein in human synovium from patients with
rheumatoid arthritis than in patients with
osteoarthritis. SL-1 transcripts and SL-1 protein
were detected in lining cells, and in the underlying stroma, and in chondrocytes and osteoclasts
of the joints of rats with streptococcal cell wall
arthritis but not in the same locations of athymic
rats (Case et al, 1989b). The development of
polyarthritis in these animals was antagonized by
TGF-P, presumably by downregulation of MMP
expression or upregulation of TIMP-1 (Brandes
et al, 1991). TIMP-1 levels are sigificantly elevated in synovial fluid from patients with rheumatoid arthritis when compared with controls (1.5
|ng/ml vs. 357 ng/ml) (Hayakawa etal, 1991) and
TIMP levels in synovial fluids of rheumatoid arthritis patients are as much as four-fold higher
than in serum (4.6 (ig/ml vs. 1.3 |Ltg/ml) (Cawston
etal, 1987).
230
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231
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APPENDIX 1
MMP Sequences
The sequences are aligned to maximize homology. Asterisk indicates signal peptide cleavage site.
MMP sequence data from: human FIB-CL: Goldberg et al, 1986; Whitham et al, 1986; Templeton et
al, 1990; rabbit FIB-CL: Fini et al, 1987a; pig FIB-CL: Clarke et al, 1990; rat FIB-CL: Quinn et al,
1990; human PMN-CL: Hasty et al, 1990; Devarajan et al, 1991; human SL-1: Wilhelm et al, 1987;
Saus etal, 1986; rabbit SL-1: Fini etal, 1987b; mouse SL-1: Ostrowski etal, 1988; rat SL-1: Matrisian
et al, 1985; human SL-2: Muller et al, 1988; rat SL-2: Breathnach et al, 1987; human SL-3: Basset et
al, 1990; mouse MME: Shapiro et al, 1992; human PUMP-1: Muller et al, 1988; human Mr 72K GL:
Collier et al, 1988; human Mr 92K GL: Goldberg et al, 1989.
SIGNAL PEPTIDE
PROPEPTIDE
BASIC SEQUENCE
*
Z+.
"
CYSSEQUENCE
VDLVQKYLEK-Y-YNLKNDGRQVE
KRRNSGPV-YEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGVPDVAQ
PPLLLLLF---WGWSHS''FPAT--LETQEQD
VEMVQKYLEN-Y-YNLKDDWRKIP
KQRGNGLA-VEKLKQMQEFFGLKVTGKPDAETLKMMKQPRCGVPDVAQ
LPLLLLLL---WGVGSHG''FPAA--SETQEQD
ETQEQD
VEIVQKYLKN-Y-YNLNSDGVPVE
KKRNSGLV-VEKLKQMQQFFGLKVTGKPDAETLNVMKQPRCGVPDVAE
AEHYLKS-Y-YHPVT-LAGIL
KKSTVTST-VDRLREMQSFFGLDVTGKLDDPTLDIMRKPRCGVPDVGV
ATFFLLSWTHCWSLPL-P''YGDDDDDDLSEEDLEF
VSSKEKN
TKTVQDYLEKFY-QLPSNQYQST
RKNGTN-VIVEKLKEMQRFFGLNVTGKPNEETLDMMKKPRCGVPDSGG
MFSLKT
LPFLLLL
HVQISKA't FP
RRGPQ-PW---HAALPSSPAPAPATQE-APRPASSLRPPRCGVPDPSD
MAPSAAA-RALLPPMLLLLLQPPPLLARA LPPD--VHHLHAE
t
RRKDSN-LIVKKIQGMQKFLGLEVTGKLDTDTLEVMRKPRCGVPDVGH
MMHLA
FLVLLCLPVC
SA^ YPLSGAAK--EED--SNKDLAQQYLEK-Y-YNLEKDVKQF
MKS
LPILLLLCVAVC
SA't YPLDGAAR--GEDTS--MNLVQKYLEN-Y-YDLKKDVKQFV
RRKDSGPV-VKKIREMQKFLGLEVTGKLDSDTLEVMRKPRCGVPDVGH
MKT
LPTLLLLCVALC
SA^'YPLDGASR--DADTTN-MDLLQQYLEN-Y-YNLEKDVKQFV
KRKDSSPV-VKKIQEMQKFLGLEVTGKLDSNTLEVIRKPRCGVPDVGH
EN-Y-YGLAKDVKQFI
KKKDSS-LIVKKIQEMQKFLGLEMTGKLDSMTMELMHKPRCGVPDVGG
MKG
LPVLLWLCTAVC
SS'k YPLHG-S
EEDAG--MEVLQKYLEN-Y-YGLEKDVKQFT
KKKDSSPV-VKKIQEMQKFLGLKMTGKLDSNTMELMHKPRCGVPDVGG
ME
PLAILVLLCFPIC
SA'^YPLHGAVR---QDHST-MDLAQQYLEI-Y-YNFRKNEKQFF
KRKDSSPV-VKKIEEMQKFLGLEMTGKLDSNTVEMMHKPRCGVPDVGG
FLMMIVFLQVSAC
GA APMND-S---EF--AEW
YLSRFYDYGKDRIPMTKTKTNRNFLK
EKLQEMQQFFGLEATGQLDNSTLAIMHIPRCGVPDVQH
MK
MRLT
VLC-AVCLLPGSLA :^LPLP-QEAGGMS-ELQWEQA-QDYLKRFYLYDSET
KNANSLEAKLK---EMQKFFGLPITGMLNSRVIEIMQKPRCGVPDVAE
MEALMARGALTGPLRALCLLGCLLSHAAA k APSPIIK
FPGD-VAPKTDKELAVQYL-NTFYGCPKESCNLFVLKDT
LKK---MQKFFGLPQTGDLDQNTIETMRKPRCGNPDVAN
MSLWQ-PLV-LVLLVLGC---C
FA t APRQRPSTLVLFPGDLRTNLTDRQLAEEYLYRYGYTRVAEMRGES--K---SLGPALLLL---QKQLSLPETGELDSATLKAMRTPRCGVPDLGR
MHSF
MPG
HUMAN FIB-CL
RABBIT FIB-CL
PIG FIB-CL
RAT FIB-CL
HUMAN PMN-CL
HUMAN SL-3
HUMAN SL-2
HUMAN SL-1
RABBIT SL-1
MOUSE SL-1
RAT SL-1
RAT SL-2
MOUSE MME
HUMAN-PUMP-1
HUMAN Mr 72K GL
HUMAN Mr 92K GL
CATALYTIC DOMAIN
ACTIVATION SITES
CA-BINDING SITE I
N-NFTEYN
K-DFRNYN
FVLTPGNPRWENTHLTYRIENYTPDLSREDVDRAIEKAFQLWSNVSPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTK-NFRDYN
FMLTPGNPKWERTNLTYRIRNYTPQLSFAEVERAIKDAFELWSVASPLIFTRISQGEADINIAFYQRDHGDNSPFDGPNGILAHAFQPGQGIGGDAHFDAEETWTN-TSANYN
GLSARNRQKRFVLSGG--RWEKTDLTYRILRFPWQLVQEQVRQTMAEALKWSD^
E-DASGTN
K-DTTGTN
[K-DTTGTN
-FSTFPGSPKWRKSHITYRIVNYTPDLPRQSVDSAIEKALKVWEEWPLTFSRISEGEADIMISFAVGEHGDFVPFDGPGWLAHAYAPGPGTNGDAHFDDDERWTE-DVTGTN
D-DVTGTN
G-PSGTN
TK-SFQGTN
UN
GGDSHFDDDELWTLGEGQVRV-KYGN
T
-FQTFEGDLKWHHHNITYWIQNYSEDLPRAVIDDAFARAFALWSA^/TPLTFTR /YSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFPPGPGIQGDAHFDDDELWSLGKGVWPTRFGN
232
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HUMAN FIB-CL
RABBIT FIB-CL
PIG FIB-CL
RAT FIB-CL
HUMAN PMN-CL
HUMAN SL-3
HUMAN SL-2
HUMAN SL-1
RABBIT SL-1
MOUSE SL-1
RAT SL-1
RAT SL-2
MOUSE MME
HUMAN-PUMP-1
HUMAN Mr 72K GL
HUMAN Mr 92K GL
CATALYTIC DOMAIN
FIBRONECTIN TYPE II REPEATS
HUMAN F I E - C L
RABBIT F I E - C L
FIE-CL
PIG
PAT FIB-CL
HUMAN PMN-CL
HUMAN S L - 3
HUMAN SL-2
HUMAN S L - 1
RABBIT S L - 1
MOUSE S L - 1
RAT S L - 1
PAT s L - 2
MOUSE MME
HUMAN-PUMF-1
-.
-.
FrFLFNGreYNSZTDTGRSDGFLWCSTTYNFEIOXSKYGFCPHEALFTMGGNA^
F'r? IFElFSYSACTTrCRSDCLPWCSTTANYDTDDFPGFCPSERLYTRIX^ADGKFCQFPFIFCGQSYSACTTDGRSDGYRWCATA-
HINGE REGION
CATALYTIC DOMAIN
FIBRONECTIN TYPE II REPEATS
HUMAN Mr ~2K GI
HUMAN Mr 52K 31
CA-BINDING SITE 2
ZN-BINDING SITE
LHRVAA-HELGHSLGLSHSTDIGALMYPSY-TFS--GDVQLAQDDIDGIQAIYG
LYRVAA-HELGHSLGLSHSTDIGALMYPNYM-FS--GDVQLAQDDIDGIQAIYG
LYRVAA-HELGHSLGLSHSTDIGALMYPNYI-YT--GDVQLSQDDIDGIQAIYG
LFIVAA-HELGHSLGLDHSKDPGALMFPIYT-YTGKSHFMLPDDDVQGIQSLYG
LFLVAA-HEFGHSLGLAHSSDPGALMYPNYA-FRETSNYSLPQDDIDGIQAIYG
LLQVAA-HEFGHVLGLQHTTAAKALMSAFYT-FRYPL--SLSPDDCRGVQHLYG
LFLVAA-HELGHSLGLFHSANTEALMYPLYNSFTELAQFRLSQDDVNGIQSLYG
LFLVAA-HEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYG
LFLVAA-HELGHSLGLFHSANPEALMYPVYNAFTDLARFRLSQDDVDGIQSLYG
LFLVAA-HELGHSLGLYHSAKAEALMYPVYKSSTDLSRFHLSQDDVDGIQSLYG
LFLVAA-HELGHSLGLEHSANAEALMYPVYKSSTDLARFHLSQDDVDGIQSLYG
LFLVAA-HELGHSLGLFHSNNKESLMYPVYRFSTSQANIRLSQDDIEGIQSLYG
LFLVAV-HELGHSLGLQHSNNPKSIMYPTYR-YLNPSTFRLSADDIRNIOSLYG
FLYAATHELGHSLGMGHSSDPNAVMYPTYGN-GDPQNFKLSQDDIKGIQKLYG
HUMAN FIB-CL
RABBIT FIB-17
PIG FIB-CL
PAT FIB-CL
HUMAN PMN-CL
HUMAN S L - 3
HUMAN SL-2
HUMAN SL-1
RABBIT SL-1
MOUSE S L - 1
PAT SL-1
PAT SL-2
MOUSE MME
HUMAIi-PUMP- i
G"rA^ATTAI\LCCFi-W3FCPDQGYSLFLVAA-HEFGHAMGLEHSQDPGAUlAPIY-TYT--KNFRLSQDDIKGIQELYG
^ _ . z.T^SN-ZSEl'i^GFCPDQGYSLFLVAA-HEFGHALGLDHSSVPFJU^YPMY-
HUMAN Mr ~LY.
HUMAN Mr "rCr"
___
PEXIN DOMAIN I
HINGE REGION
- ---
RSSNFVQPIGPQTPKACDSKLTFDAITTIRGEVMFFKDRFYMRTNPFY--PEVEI^
PSQNPSQPVGPOTPKVCDSKLTFDAITTIRGEIMFFKDF^YMR^
PSENPVQPSGPOTPQVCDSKLTFDAITTLRGEIJ4FFKDRFYMRTNSFY--^
PGDEDPNPKHPKTPEKCDPALSLDAITSLRGETMIFKDRFFWRLHPQQVEPELFL--TKS--FWPELPDHVDAAYEHPSRDLMFIFRGRKFWAL
LSSNPIQPTCPSTPKPCDPSLTFDAITTLRGEILFFKDRYFVmRHPQL--QRVEMN-FISL-FVJPSLPTGIQAAYEDFDRDLIFLFKGNQYWAL
-CPWPTVTSRTPALGPQAGIDTOEIAPLEPDAPPDACE-A-SFIAVSTIRGELFFFKAGFVWRLRGGQ--LQPGYPALASR-m
PFPASTEEP-LVFTKSVPSGSEMPMCDPALSFDAISTLRGEYLFFKDRYFWRRSHWN--PEPEFH-LISA-FV/PSLPSYLDAAYEVNSRDTWIFKGNEFWAI
PPPDSPETP-LVPTEPVPPEPGTPANCDPALSFI^VSTLRGEILIFKDRHFWRKSLRK--LEPELH-LISS-FWPSLPSGVDAAYEVTSKDLWIFKGNQFWAI
PAPASPDN---VPMEPVPPGSCTPVMCDPDLSFDAISTLRGEILFFKDRYFWR^^
TPTASPDVLVLVPTKSNSLEPETSPMCSSTLFFDAVSTLRGEVLFFro
PFTESPDVLV-VPTKSNSLDPETLPMCSSALSFnAVSTLRGEVLFFKDRHFWRKSLR-T-PEPGFY-LISS-FWPSLPSNME^YEVTO
__
ARPSSDATV-VPVPSVSPKPCTFVKCDPALSFDAVTOLRGEFLFFKDraF
AFvT.PPSL
TKPSSP-PST--FCHQSLSFDAVTIVGEKILFFKDI(^FWWKLPG---SPATNITSISSI-WPSIPSAIQAAYEIESRNQLFLFia)EKYWLI
--
KRSNSRKK
ASPDIDL-GTGFTPTLGPVTPEICKQDIVFDGIAQIRGEIFFFKDRFIWRTWPR-DKPMG-PLL
r.PTGPPSAGPTGPPTAGPSTA-TTVPLSPVDD
ACNVNI-FnAIAEIGNQLYLFKTCKYWRFSEGRGSRP^-PFLIADKWPA-LPRKLDSVFEEPLSKKLFFFSGRQVWVHi'
PEXIN DOMAIN 2
FKEI'iSFKIIHSFhTIHR-
PEXIN DOMAIN 3
HUMAN FIB-CL
RABBIT FIB-CL
PIG FIB-CL
PAT FIB-CL
HUMAN PMN-CL
HUMAN S L - 3
HUMAN SL-2
HUMAN S L - 1
RABBIT S L - 1
MOUSE S L - 1
PAT S L - 1
RAT SL-2
MOUSE MME
HUMAN - PUMP-1
HUMAN Mr 7 2K :
HUMAN Mr 92K :
PEXIN DOMAIN 4
LSEENTGKTYFF/ANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFMK-DGFF- -YFFHGTRQYKFDPKT-KRILTL---QKANS--WFNCRKN
GFPRSVNHIE^VSEEDlX3KTYFPyANKYWRYDEYKRSMDAGYPKMIEYDFPGIGNKVDAVFKK-DGFF- - YFFHGTRQYKFDPKT-KRILTL -QKANS- -WRJCRKN
3FPSr/KNIDAAVFEEDTGKTYFP/AHECWRYDEYKQSMDTGYPKMIAEEFPGIGNKVnAVFQK-DGFL- -YFFHGTRQYQFDFKT-KRILTLQKANS--WFHCRKN
IFPK^vVJlLSAA'/HFEDTGKTLFFSGNHVWSYDDANQTMDKDYPRLIEEEFPGIGDKVDAVYEK-NGYI- -YFFM5PIQ--FEYSIWSNRIVRVM--PTNS--LLWC
lFPSS\'QAIDAAVFYRS--KTYFPyNDQFWRYDNQRQFMEPGYPKSISGAFPGIESKVDAVFQQ-EHFF- -HVFSGPRYYAFDLIA-QRVTRV---ARGNK--WLMCRYG
JL'/Pi^Pv^-AAL'/WGPEKIJKIYFFRGFUDYWRFHPSTRRVDSPVPRR-ATDWRGVPSEIDAAFQDADGYA- -YFLRGRLYWKFDPVK-VKALEGFPRLVGPD--FFGCAEPANTFL
JFPPTIRKIDAAVSDKEKKKTYFFAADKYWRFDENSQSMEQGFPRLIADDFPGVEPKVDAVLQA-FGFF- -YFFSGSSQFEFDPNA-RMVTHI
LKSNS--WLHC
SFPFT/RKIDM ISDKEKNKTYFF/EDKYWRFDEKRNSMEPGFPKQIAEDFPGIDSKIDAVFEE-FGFF- -YFFTGSSQLEFDPNA-KKVTHT---LKSNS--WLNC
r
SF?STIP^ID/^ISDKERJCK'nTFv EDKYWRFDEKRQSLEPGFPRHIAEDFPGINPKIDAVFE-AFGFF- -YFFSGSSQSEFDPNA-KKVTHV---LKSNS--WFQC
JLPATvrKKIDA^JSN?^KJTYFF\/EDKYWRFDEKKQSMEPGFPRKIAEDFPGVDSRVDAVFE-AFGFL- -YFFSGSSQLEFDPNA-KKVTHILKSNSWR1C
^LPET.'iKIDA^JSLKDQKKTYFF/EDKFWRFDEKKQSMDPEFPRKIAENFPGIGTKVDAVFE-AFGFL --YFFSGSSQLEFDPNA-GKVTHI---LKSNS--WFHC
JFPPT^TJ<IDA^.WEKEKKKTYFFvrGDKYWRFDETRQLMDKGFPRLITDDFPGIEPQVDAVLH-AFGFF YFFCGSSQFEFDPNA-RTVTHT---LKSNS--WLLC
.FsA^Tao.^AAVFDPLRQKWFFVDKHYWRYDVRQELMDPAYPKLFSTHFPGIKPKIDAVLYFKRH-- -YYLFQGAYQLEYDPLF-RRVTKT---LKSTSWFGC
- * -: ^3-L^-LPFCVQRV-DA^NON'SraiKKTYIFAGDKFWRYNFATOaMD^
VrFFl,EFLlL^VAwV-TG;iLRSGR-GKMLLFSGRRLWRFDVKAQMVDPRSASEVDRMFPGVPLI7^
233
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APPENDIX 2
20
10
rabbit-TlMP-l
mouse-TlMP-1
calf-TIMP-1
human-TlMP-1
human-TIMP-2
calf-TIMP-2
chick-TIMP
C
C
C
C
C
C
7
T
S
T
T
S
S
T
C
C
C
C
C
C
C
30
V P P H P Q T A F C N S D L V I R A K F V G A P E V
A P P H P Q T A F C N S D L V I R A K F M G S P R I
V P P H P Q T A F C N S D V V I R A K F V G T A E V
V P P H P Q T A F C N S D L V I R A K F V G T P E V
S P V H P Q Q A F C N A D V V I R A K A V S E K E V
S P V H P p Q A F C N A D I V I R A K A V N K K E V
V P I H P Q D A F C N S D I V I R A K V V G K K I M
N
N
N
N
D
D
40
50
60
- H T T L Y Q - - - - - R Y E I K T - T K M F K G F D A L
- E T T L Y Q - - - - - - R Y K I K M M T K M L K G F K A V
- E T A L Y Q - - - - . - - R Y E I K M - T K M F K G F S A L
rabbit-TIMP-1
mouse-TlMP-1
calf-TIMP-1
human-TIMP
human-TIMP
calf-TIMP-2
- Q T T L Y Q - - - - - - R Y E I K M - T K M Y K G F Q A L
S G N D I Y G N P I K R I Q Y E I K Q I K M F K G P E K S G N D I Y G N P I K R I Q Y E I K Q - I K M F K G P D Q -
rabbit-TIMP-1
mouse-TIMP-1
calf-TIMP-1
human-TlMP-1
human-TIMP-2
calf-TIMP-2
G
G
R
G
-
H A T
D A A
D A P
D A A
- - -
D
D
D
D
-
rabbit-TIMP-1
mouse-TIMP-1
calf-TIMP-1
human-TIMP-1
human-TIMP-2
calf-TIMP-2
F
F
F
F
Y
Y
L
L
L
L
L
L
I
I
I
I
I
I
A
T
A
A
A
A
rabbit-TIMP-1
mouse-TIMP-1
calf-TIMP-1
human-TIMP-1
human-TIMP-2
calf-TIMP-2
Q
Q
Q
Q
Q
Q
R
Q
R
R
K
K
S
R
R
R
K
K
rabbit-TIMP-1
mouse-TIMP-1
calf-TIMP-1
human-TIMP-1
human-TIMP-2
calf-TIMP-2
S
S
S
S
S
S
D
D
D
G
P
P
rabbit-TIMP-1
mouse-TIMP-1
calf-TIMP-1
human-TIMP-1
human-TIMP-2
calf-TIMP-2
P
L
P
P
D
D
G
G
G
G
G
G
70
Y T
Y T
Y T
Y T
I Y
I Y
P
P
P
P
T
T
A
V
A
A
A
A
M
M
M
M
P
P
E
E
E
E
S
A
S
S
S
S
S
A
V
L
V
V
A
A
C
C
C
C
V
V
G
G
G
G
C
C
80
Y S
Y A
Y F
Y F
G G -
H
H
H
H
V
V
K
K
R
R
S
S
S
S
S
S
L
L
Q
Q
Q
H
D
D
G Q L R
G R L R
G Q L S
G K L Q
G K A E
G K A E
100
- N G
- N G
- N
- D G
G D G
G N G
L
K
G
L
K
N
L
F
H
L
M
M
H
H
L
H
H
H
I
I
H
I
I
I
T
N
I
T
T
T
T
A
T
T
L
L
C
C
T
C
C
C
S
S
C
S
D
D
110
F V V
F L V
S F V
F V A
F I V
F I V
P
P
A
P
P
P
W
W
P
W
W
T
120
N S L S F S
R T L S P A
W N S M S S A
N S L S L A
D T L S T T
D T L S A T
G
V
G
G
S
S
F
F
F
F
L
L
T
S
T
T
N
N
K
K
K
K
H
H
T
K
T
T
R
R
N
-
Y
Y
Y
Y
Y
Y
A
S
A
T
Q
Q
A
A
A
V
M
M
G
G
G
G
G
G
C
C
C
C
C
C
D
G
E
E
-
M
V
E
E
E
E
C
C
C
C
C
C
T
T
T
T
K
K
V
V
V
V
I
I
F
F
F
F
T
T
C
C
C
C
C
C
A
L
S
L
P
P
S
S
S
S
M
M
I
I
I
I
I
I
P
P
P
P
P
P
C
C
C
C
C
C
H
K
K
K
Y
Y
T
T
T
T
D
D
H
H
H
H
E
E
C
C
C
C
C
C
L
L
L
L
L
L
W
W
W
W
W
W
T
T
T
T
M
M
D
D
D
D
D
D
160
S S
Q L
Q L
Q L
W V
W V
L
L
L
L
T
T
V
T
Q
E
E
G
G
G
G
K
K
S
S
S
S
N
N
D
E
D
E
I
I
K
D
K
K
N
N
G
G
G
G
G
F
Y
F
F
H
H
170
Q S R
Q S R
Q S H
Q S R
Q A K
Q A K
H
H
R
H
F
F
L
F
L
L
F
F
A
A
A
A
A
A
C
C
C
C
C
C
L
L
L
L
I
P Q
P R
P R
P R
K R
IK
L
L
L
L
S
S
C
C
C
C
C
C
A
T
T
T
A
A
W
W
W
W
W
W
E
R
Q
Q
Y
Y
S
S
S
S
R
R
L
L
L
L
G
G
190
R P R
G A R
R A Q
R S Q
A A P
A A P
I
I
I
I
D
D
R
R
R
R
I
I
F
Y
F
F
E
E
V
A
I
V
F
F
130
N
N
N
N
V
I
R
R
R
R
G
G
S
S
S
S
G
G
E
E
E
E
K
K
140
A
P
P
P
R
R
150
K D
M
I
P
P
90
E
E
E
E
K E
K E
A
A
K Q E F L D I E D P
K Q E F L D I E D P
234
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L
L
L
L
I
I
E
E
Q
Q
S
S
180
E
N
E
E
S
RS
REFERENCES
Abe, S., M. Shinmei and Y. Nagai: Synovial Collagenase
and Joint Diseases: The Signficancy of Latent Collagenase with Special Reference to Rheumatoid Arthritis. /. Biochem. 73:1007-1011 (1973).
Aggeler, J., S. M. Frisch and Z. Werb: Changes in Cell Shape
Correlate with Collagenase Gene Expression in Rabbit Synovial Fibroblasts. /. Cell Biol. 98:1662-1671
(1984).
Albini, A., A. Melchiori, L. Santi, L. A. Liotta, P. D. Brown
and W. G. Stetler-Stevenson: Tumor Cell Invasion
Inhibited by TIMP-2. J. Natl. Cancer Inst. 83:775779 (1991).
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