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Common mechanisms
Pre-formed structures and compounds
Background
Plant disease resistance is crucial to the reliable production of food, and it provides signicant reductions in agricultural use of land, water, fuel and other inputs. Plants secondary plant wall
in both natural and cultivated populations carry inherent
disease resistance, but this has not always protected them.
Plant cuticle/surface
The late blight Irish potato famine of the 1840s was
caused by the oomycete Phytophthora infestans. The
Plant cell walls
worlds rst mass-cultivated banana cultivar Gros Michel
was lost in the 1920s to Panama disease caused by the
Antimicrobial chemicals (for example: glucosides,
fungus Fusarium oxysporum. The current wheat stem,
saponins)
leaf, and yellow stripe rust epidemics spreading from East
Africa into the Indian subcontinent are caused by rust
Antimicrobial proteins
fungi Puccinia graminis and P. striiformis. Other epidemics include Chestnut blight), as well as recurrent se Enzyme inhibitors
vere plant diseases such as Rice blast, Soybean cyst nematode, Citrus canker.[1]
Detoxifying enzymes that break down pathogenderived toxins
Receptors that perceive pathogen presence and activate inducible plant defences[2]
1
2.2
IMMUNE SYSTEM
Cell wall reinforcement (callose, lignin, suberin, cell PAMP-Triggered Immunity (PTI) is often a plants rst
wall proteins)
inducible response.[4][7] Immune-eliciting PAMPs in Antimicrobial chemicals, including reactive oxygen clude bacterial agellin or lipopolysaccharides, or fungal
species such as hydrogen peroxide or peroxynitrite, chitin. Much less widely conserved molecules that inor more complex phytoalexins such as genistein or habit multiple pathogen genera are classied as MAMPs
by some researchers. The defenses induced by MAMP
camalexin)
perception are sucient to repel most pathogens. How Antimicrobial proteins such as defensins, thionins, ever, pathogen eector proteins are adapted to suppress
or PR-1
basal defenses such as PTI.[5]
Antimicrobial enzymes such as chitinases, betaglucanases, or peroxidases
Hypersensitive response - a rapid host cell death response associated with defence mediated by Resis- Eector Triggered Immunity (ETI) is activated by the
tance genes.[2]
presence of pathogen eectors.[4][7] The ETI immune response is reliant on R genes, and is activated by specic
Endophyte assistance: Plants roots release chempathogen strains. As with PTI, many specic examples
icals that attract benecial bacteria to ght o
of apparent ETI violate common PTI/ETI denitions.[8]
[3]
infections.
Most plant immune systems carry a repertoire of 100-600
dierent R genes that mediate resistance to various virus,
bacteria, fungus, oomycete and nematode pathogens and
3 Immune system
insects. Plant ETI often cause an apoptotic hypersensitive
response.
The plant immune system consists of two interconnected
tiers of receptors, one outside and one inside the cell.
Both systems sense the intruder, respond to the intrusion 3.2.1 R genes and R proteins
and optionally signal to the rest of the plant and sometimes to neighboring plants that the intruder is present. Plants have evolved R genes (resistance genes) whose
The two systems detect dierent types of pathogen products allow recognition of specic pathogen eectors,
either through direct binding or by recognition of the efmolecules and classes of plant receptor proteins.[1]
fectors alteration of a host protein.[4] These virulence
The rst tier is primarily governed by pattern recognition factors drove co-evolution of plant resistant genes to comreceptors that are activated by recognition of evolutionar- bat the pathogens Avr (avirulent) genes. Many R genes
ily conserved pathogen or microbialassociated molecu- encode NB-LRR proteins (nucleotide-binding/leucinelar patterns (PAMPs or MAMPs, here P/MAMP). Ac- rich repeat domains, also known as NLR proteins or
tivation of PRRs leads to intracellular signaling, tran- STAND proteins, among other names).
scriptional reprogramming, and biosynthesis of a complex output response that limits colonization. The system R gene products control a broad set of disease resistance
responses whose induction is often sucient to stop furis known as PAMP-Triggered Immunity (PTI).[4][5]
ther pathogen growth/spread. Each plant genome conThe second tier (again, primarily), eector-triggered imtains a few hundred apparent R genes. Studied R genes
munity (ETI), consists of another set of receptors, the usually confer specicity for particular pathogen strains.
nucleotide-binding LRRs (NLRs). They operate within
As rst noted by Harold Flor in his mid-20th century
the cell, encoded by R genes. The presence of specic formulation of the gene-for-gene relationship, the plant
pathogen eectors activates specic NLR proteins that R gene and the pathogen Avr gene must have matched
limit pathogen proliferation.[1]
specicity for that R gene to confer resistance, suggesting
Receptor responses include ion channel gating, oxidative a receptor/ligand interaction for Avr and R genes.[7] Alburst, cellular redox changes, or protein kinase cascades ternatively, an eector can modify its host cellular target
that directly activate cellular changes (such as cell wall (or a molecular decoy of that target) activating an NLR
reinforcement or antimicrobial production), or activate associated with the target or decoy.
changes in gene expression that then elevate other defen- Plant breeders frequently rely on R genes to obtain usesive responses.[1]
ful resistance, although the durability of this resistance
Plant immune systems show some mechanistic similarities with the immune systems of insects and mammals, but also exhibit many plant-specic characteristics.
Plants can sense the presence of pathogens and the eects
of infection via dierent mechanisms than animals.[6]
3
cially those that occur in small clusters of similar genes, type of resistance may exist depending on the particcan evolve new pathogen specicities over much shorter ular gene and plant-pathogen combination. Other reaintervals.[9]
sons for eective plant immunity can include a lack of
coadaptation (the pathogen and/or plant lack multiple
mechanisms needed for colonization and growth within
3.2.2 Eector biology
that host species), or a particularly eective suite of preformed defenses.
Eectors are central to microbes pathogenic or symbiotic potential and of microscopic plant-colonizing animals such as nematodes.[10][11][12] Eectors typically are
proteins that are delivered mostly outside the microbe 4 Signaling mechanisms
and into the host cell. Eectors manipulate cell physiology and development. As such, eectors oer exam- 4.1 Perception of pathogen presence
ples of co-evolution (example: a fungal protein that functions outside of the fungus but inside of plant cells has Plant defense signaling is activated by pathogen-detecting
evolved to take on plant-specic functions). Pathogen receptors.[5] The activated receptors frequently elicit
host range is determined, among other things, by the pres- reactive oxygen and nitric oxide production, calcium,
ence of appropriate eectors that allow colonization of a potassium and proton ion uxes, altered levels of salicylic
particular host.[5] Pathogen-derived eectors are a pow- acid and other hormones and activation of MAP kinases
erful tool to identify host functions that are important in and other specic protein kinases.[7] These events in turn
disease. Apparently most eectors function to manip- typically lead to the modication of proteins that conulate host physiology to allow disease to occur. Well- trol gene transcription, and the activation of defensestudied bacterial plant pathogens typically express a few associated gene expression.
dozen eectors, often delivered into the host by a Type
III secretion apparatus.[10] Fungal, oomycete and nema- In addition to PTI and ETI, plant defenses can be actitode plant pathogens apparently express a few hundred vated by the sensing of damage-associated compounds
(DAMP), such as portions of the plant cell wall reeectors.[11][12]
leased during pathogenic infection. Many receptors for
So-called core eectors are dened operationally by MAMPs, eectors and DAMPs have been discovered.
their wide distribution across the population of a par- Eectors are often detected by NLRs, while MAMPs and
ticular pathogen and their substantial contribution to DAMPs are often detected by transmembrane receptorpathogen virulence. Genomics can be used to identify kinases that carry LRR or LysM extracellular domains.[5]
core eectors, which can then functionally dene new R
alleles, which can serve as breeding targets.[1]
3.3
Numerous genes and/or proteins have been identied that mediate plant defense signal transduction.[15]
Against viruses, plants often induce pathogen-specic
Cytoskeleton and vesicle tracking dynamics help to origene silencing mechanisms mediated by RNA interferent plant defense responses toward the point of pathogen
[13]
ence. This is a simple form of adaptive immunity.
attack.
Plant immune systems also can respond to an initial infection in one part of the plant by physiologically elevating
the capacity for a successful defense response in other 4.2.1 Mechanisms of transcription factors and horparts. Such responses include systemic acquired resismones
tance, largely mediated by salicylic acid-dependent pathways, and induced systemic resistance, largely mediated Plant immune system activity is regulated in part by sigby jasmonic acid-dependent pathways.[14]
naling hormones such as:[16]
3.4
Species-level resistance
Salicylic acid
Jasmonic acid
In a small number of cases, plant genes are eective
against an entire pathogen species, even though that
Ethylene
species that is pathogenic on other genotypes of that host
species. Examples include barley MLO against powdery
mildew, wheat Lr34 against leaf rust and wheat Yr36 There can be substantial cross-talk among these
against stripe rust. An array of mechanisms for this pathways.[16]
4.3
Regulation by degradation
5.1
5
viral coat protein gene sequences conferred virus resistance via small RNAs. This proved to be a widely applicable mechanism for inhibiting viral replication. Combining coat protein genes from three dierent viruses,
scientists developed squash hybrids with eld-validated,
multiviral resistance. Similar levels of resistance to this
variety of viruses had not been achieved by conventional
breeding.
Crossing of a desirable but disease-susceptible variety to another variety that is a source of resistance. A similar strategy was deployed to combat papaya
ringspot virus, which by 1994 threatened to destroy
Growth of breeding candidates in a disease- Hawaiis papaya industry. Field trials demonstrated exconducive setting, possibly including pathogen in- cellent ecacy and high fruit quality. By 1998 the rst
oculation. Attention must be paid to the specic transgenic virus-resistant papaya was approved for sale.
pathogen isolates, to address variability within a sin- Disease resistance has been durable for over 15 years.
gle pathogen species.
Transgenic papaya accounts for ~85% of Hawaiian production. The fruit is approved for sale in the U.S., Canada
Selection of disease-resistant individuals that retain and Japan.
other desirable traits such as yield, quality and inPotato lines expressing viral replicase sequences that concluding other disease resistance traits.
fer resistance to potato leafroll virus were sold under the
trade names NewLeaf Y and NewLeaf Plus, and were
Resistance is termed durable if it continues to be eec- widely accepted in commercial production in 1999-2001,
tive over multiple years of widespread use as pathogen until McDonalds Corp. decided not to purchase GM
populations evolve. "Vertical resistance" is specic to potatoes and Monsanto decided to close their Naturecertain races or strains of a pathogen species, is often Mark potato business.[25] NewLeaf Y and NewLeaf Plus
controlled by single R genes and can be less durable. potatoes carried two GM traits, as they also expressed BtHoizontal or broad-spectrum resistance against an entire mediated resistance to Colorado potato beetle.
pathogen species is often only incompletely eective, but
more durable, and is often controlled by many genes that No other crop with engineered disease resistance against
microbial pathogens had reached the market by 2013, alsegregate in breeding populations.
though more than a dozen were in some state of developCrops such as potato, apple, banana and sugarcane are ment and testing.
often propagated by vegetative reproduction to preserve
highly desirable plant varieties, because for these species,
outcrossing seriously disrupts the preferred traits. See 5.1.1 PRR transfer
also asexual propagation. Vegetatively propagated crops
may be among the best targets for resistance improvement Research aimed at engineered resistance follows multiby the biotechnology method of plant transformation to ple strategies. One is to transfer useful PRRs into species
manage genes that aect disease resistance.
that lack them. Identication of functional PRRs and
Scientic breeding for disease resistance originated with their transfer to a recipient species that lacks an ortholSir Rowland Bien, who identied a single recessive gene ogous receptor could provide a general pathway to adfor resistance to wheat yellow rust. Nearly every crop was ditional broadened PRR repertoires. For example, the
then bred to include disease resistance (R) genes, many by Arabidopsis PRR EF-Tu receptor (EFR) recognizes the
bacterial translation elongation factor EF-Tu. Research
introgression from compatible wild relatives.[1]
performed at Sainsbury Laboratory demonstrated that deployment of EFR into either Nicotiana benthamianaor
5.1 GM or transgenic engineered disease Solanum lycopersicum (tomato), which cannot recognize
EF-Tu, conferred resistance to a wide range of bacteresistance
rial pathogens. EFR expression in tomato was especially eective against the widespread and devastating
The term GM (genetically modied) is often used soil bacterium Ralstonia solanacearum.[26] Conversely,
as a synonym of transgenic to refer to plants modi- the tomato PRR Verticillium 1 (Ve1) gene can be transed using recombinant DNA technologies. Plants with ferred from tomato to Arabidopsis, where it confers resistransgenic/GM disease resistance against insect pests tance to race 1 Verticillium isolates.[1]
have been extremely successful as commercial products, especially in maize and cotton, and are planted
annually on over 20 million hectares in over 20 coun- 5.1.2 Stacking
tries worldwide[24] (see also genetically modied crops).
Transgenic plant disease resistance against microbial The second strategy attempts to deploy multiple NLR
pathogens was rst demonstrated in 1986. Expression of genes simultaneously, a breeding strategy known as
6
stacking. Cultivars generated by either DNA-assisted
molecular breeding or gene transfer will likely display
more durable resistance, because pathogens would have
to mutate multiple eector genes. DNA sequencing allows researchers to functionally mine NLR genes from
multiple species/strains.[1]
The avrBs2 eector gene from Xanthomona perforans is
the causal agent of bacterial spot disease of pepper and
tomato. The rst eector-rationalized search for a potentially durable R gene followed the nding that avrBs2
is found in most disease-causing Xanthomonas species
and is required for pathogen tness. The Bs2 NLR gene
from the wild pepper, Capsicum chacoense, was moved
into tomato, where it inhibited pathogen growth. Field
trials demonstrated robust resistance without bactericidal
chemicals. However, rare strains of Xanthomonas overcame Bs2-mediated resistance in pepper by acquisition of
avrBs2 mutations that avoid recognition but retain virulence. Stacking R genes that each recognize a dierent
core eector could delay or prevent adaptation.[1]
7
are guided by processing products of the double-stranded
RNA (dsRNA) trigger, which are known as small interfering RNAs and microRNAs.[27]
8 See also
Disease resistance in fruit and vegetables
Gene-for-gene relationship
Host range
10
EXTERNAL LINKS
10 External links
http://www.apsnet.org/
11
11.1
Plant disease resistance Source: https://en.wikipedia.org/wiki/Plant_disease_resistance?oldid=679427457 Contributors: D6, Discospinster, Cimex, Rjwilmsi, DVdm, Malcolma, SmackBot, EncycloPetey, Jaksmata, Vanisaac, Myasuda, Smartse, Lfstevens, R'n'B, MercrediSoir, Addbot, Ben Ben, Luckas-bot, Yobot, AnomieBOT, Citation bot, Xqbot, Erik9bot, Afb-uw, Jonesey95, EmausBot, Snotbot, BG19bot,
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