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High Resolution
Nuclear Magnetic Resonance
Thierry Toupance
4TCH701U: Characterisations
High Resolution Nuclear Magnetic Resonance
C2M team, ISM, UMR-CNRS 5255, University of Bordeaux
Chapter 1
The Physical Basis of Nuclear Magnetic Resonance Spectroscopy
I Quantum mechanics approach
I,1 Nuclear angular momentum and Spin
I,2 Nuclear magnetic moment
I,3 Energy of the nuclei in the magnetic field
The Nuclear Magnetic Resonance phenomenon
I,4 Population of the energy levels
I,5 Creation of the transition and consequences on the macroscopic magnetization
I,6 NMR sensitivity and receptivity
II Vectorial approach and Pulse Fourier Transform Spectroscopy
II,1 Vectorial approach (Bloch model) and rotating frame
II,2 Pulse generation
II,3 The pulse NMR experiments
II,3,1 Effect of the r.f. pulse on the macroscopic magnetization
II,3,2 The F.I.D. (Free Induction Decay) signal
II,3,3 Signal processing: Fourier Transform
II,3,4 NMR spectrum
II,4 Spectrometer
II,5 Relaxation processes
4TCH701U: Characterisations
High Resolution Nuclear Magnetic Resonance
Groupe C2M, ISM, UMR-CNRS 5255, Universit de Bordeaux
Chapter 1
The Physical Basis of Nuclear Magnetic Resonance Spectroscopy
III Examples
III,1 1H NMR
III,2 19F NMR
III,3 31P NMR
III,4 13C NMR
III,5 119Sn NMR
H
H
3
He
13
C
15
N
19
F
29
Si
31
P
57
Fe
77
Se
89
Y
103
Rh
(107Ag)
109
Ag
(111Cd)
113
Cd
(115Sn)
(117Sn)
119
Sn
123
( Te)
125
Te
129
Xe
169
Tm
171
Yb
183
W
187
Os
195
Pt
199
Hg
(203Tl)
205
Tl
207
Pb
3
Natural
Abundance (%)
99.985
1.3 10-4
1.108
0.37
100
4.70
100
2.19
7.58
100
100
51.82
48.18
12.75
12.26
0.35
7.61
8.58
0.87
6.99
26.44
100
14.31
14.40
1.64
33.8
16.84
29.50
70.50
22.6
Magnetic
Moment
/N
4.83724
5.1596
-3.6851
1.2166
-0.4903
4.5532
-0.96174
1.9602
0.1566
0.925
-0.237786
-0.153
-0.1966
-0.2260
-1.0293
-1.0768
-1.590
-1.732
-1.8119
-1.275
-1.537
-1.345
-0.400
0.8520
0.2025
0.111
1.043
0.87072
2.7912
2.8187
1.002
Magnetogyric
Ratio
N
107 rad.T-1.s-1
26.7520
28.535
-20.380
6.7283
-2.712
25.181
-5.3188
10.841
0.8661
5.12
-1.3155
-0.846
-1.087
-1.250
-5.6926
-5.9550
-8.792
-9.578
-10.021
-7.049
-8.498
-7.441
-2.21
4.712
1.120
0.616
5.768
4.8154
15.436
15.589
5.540
NMR
Frequency
(MHz)
Reference
100.000000
106.664
76.182
25.145004
10.136783
94.094003
19.867184
40.480737
3.238
19.071523
4.917
3.172310
4.047897
4.653623
21.215478
22.193173
32.86
35.632295
37.290662
26.35
31.549802
27.81
8.27
17.61
4.161733
2.282343
21.414376
17.910841
57.70
57.633833
20.920597
SiMe4
t-SiMe4
SiMe4
MeNO2 ou [NO3]CCl3F
SiMe4
85% H3PO4
Fe(CO)5
SeMe2
Y(NO3)3aq.
mer-[RhCl3(SMe2)3]
Ag+aq.
Ag+aq.
CdMe2
CdMe2
SnMe4
SnMe4
SnMe4
TeMe2
TeMe2
XOF4
WF6
OsO4
[Pt(CN)6]2HgMe2
TlNO3aq.
TlNO3aq.
PbMe4
Recepticity
D1H
D13C
1.00
5.75 10-7
1.76 10-4
3.85 10-6
0.834
3.69 10-4
0.0665
7.43 10-7
5.30 10-4
1.19 10-4
3.16 10-5
3.48 10-5
4.92 10-5
1.23 10-3
1.35 10-3
1.24 10-4
3.49 10-3
4.51 10-3
1.59 10-4
2.24 10-3
5.69 10-3
5.66 10-4
7.82 10-4
1.06 10-5
2.00 10-7
3.39 10-3
9.82 10-4
0.0567
0.140
2.01 10-3
5.65 103
3.26 10-3
1.00
2.19 10-2
4.73 103
2.10
3.77 102
4.22 10-3
3.01
0.675
0.179
0.197
0.279
6.97
7.67
0.705
19.8
25.6
0.903
12.7
32.3
3.21
4.44
5.99 10-2
1.14 10-3
19.2
5.57
3.22 102
7.91 102
11.4
Isotope/Spin
H (I=1)
6
Li (I=1)
7
Li (I=3/2)
9
Be (I=3/2)
10
B (I=3)
11
B ( I=3/2)
14
N (I=1)
17
O ( I=5/2)
21
Ne (I=3/2)
23
Na (I=3/2)
25
Mg (I=5/2)
27
Al (I=5/2)
33
S (I=3/2)
35
Cl (I=3/2)
37
Cl (I=3/2)
39
K (I=3/2)
Natural
Abundance
(%)
0,015
7,42
92,58
100
19,58
80,42
99,63
0,037
0,257
100
10,13
100
0,76
75,53
24,47
93,1
Magnetic
Moment
/N
1,2126
1,1625
4,20394
-1,52008
2,0792
3,4708
0,57099
-2,2407
-0,85433
2,86265
-1,012
4,3084
0,8308
1,0610
0,88313
0,50533
Magnetogyric
Ratio
N
107 rad.T-1.s-1
4,1066
3,9371
10,3975
-3,75958
2,8746
8,5843
1,9338
-3,6279
-2,1130
7,08013
-1,639
6,9760
2,055
2,6240
2,1842
1,2498
Quadrupolar
Moment
28
10 Q/m
2,8 10-3
-8 10-4
-4 10-2
5 10-2
8,5 10-2
4,1 10-2
1 10-2
-2,6 10-2
9 10-2
0,10
0,22
0,15
-5,5 10-2
-0,10
-7,9 10-2
4,9 10-2
NMR
Frequency
(MHz)
15,351
14,717
38,866
14,054
10,756
32,089
7,228
13,61
7,899
26,466
6,126
26,077
7,681
9,809
8,165
4,672
Receptivity
D1H
D13C
1,45 10-6
6,31 10-4
0,272
1,39 10-2
3,93 10-3
0,133
1,00 10-3
1,08 10-5
6,33 10-6
9,27 10-2
2,72 10-4
0,207
1,72 10-5
3,56 10-3
6,66 10-4
4,75 10-4
8,21 10-3
3,58
1,54 103
78,7
22,3
7,52 102
5,69
6,11 10-2
3,59 10-2
5,26 102
1,54
1,17 103
9,77 10-2
20,2
3,78
2,69
mass m
charge q
angular momentum L (also named spin)
Lz = mI
Spin is quantized
et
L=
(I(I+1))1/2
m
q
L
mI = + 1/2
I = 1/2
mI = - 1/2
cos =
1/2
(I(I+1))1/2
2)
3)
2H
I whole number
I=0
= n L
n = gn n : gn Land factor, n Bohr magneton
the magnetogyric ratio n of each nucleus is tabulated
z = n mI
as a result
= n (I(I+1))1/2
and
B0 0
If Bx = By = 0 and Bz 0
= z B0 = n mI B0
E
E(-1/2)
tat
-state
= n B0
-state
E(+1/2) tat
B0 = 0
B0 0
Planck-Einstein relation = h 0
0 = n B0/2
Larmor frequency
0 = n B0
General case :
A nucleus with a spin I, located in a magnetic field B0 possess 2I+1 equidistant energy levels
and separated by : E = n B0
Cons : The absorption frequency is proportionnal to the applied magnetic field and to the magnetogyric ratio
E
600 MHz E
10
15
B0 (T)
B0
-state
mI = + 1/2 (tat
)
E
M0
0B0
E == n
nB
E
-state
)
mI = -1/2 (tat
at 60 MHz :
at 800 MHz :
Electromagnetic wave (E1, B1) perpendicular to the magnetic field B0 oscillating at the frequency 0
rotation of the macroscopic magnetization
macroscopic magnetization decreases
Several mechanism: Einstein coefficients
N2
N2
N2
h
N1
N1
N1
Absorption
Spontaneous emission
Stimulated emission
P B1->2N1
P A2->1N2
P B2->1N2
S=
B02
* N * I(I+1) * NA * C * V *
Natural
Abundance
Avogadro
Number
if is large
B0 is high
high concentration C
low temprature T
Receptivity: inform about the observability of a given nucleus compared to 1H NMR carried out in the same conditions
DX1H =
SX
S1
Examples:
1H
X3
13
NX
100
IX(IX+1)
3/4
119Sn
57Fe
Oscillating field B1 can be decomposed into two magnetic components rotating clockwise and anticlockwise
respectively, the resultant of which corresponds to the actual applied field
B1 = B1(r) + B1(l)
desired direction
opposite direction
b)
Let us consider the rotating frame that rotates at the nuclear precession frequency 0 in the same direction
As a result :
- for the radiofrequency field (r.f.)
B1(r) component (+ 0 in the laboratory frame) is now static
to be taken into account because oscillation corresponding
to the nuclear precession frequency
B1(l) component (- 0 in the laboratory frame) rotated at 20
to be ignored because does not correspond to resonance
conditions
- for spin precession
precession motion of the spins is now frozen
- spins rotates at the same frequency as the r.f. field and the rotating frame
- this precession motion created by B0 does not exist in the rotating frame
Summary:
In the rotating frame, the nuclei would no longer appear to precess but would become stationary and
coincident with the magnetic field axis B0. The magnetic behaviour is now completely described by a
magnetization vector M0 acting along B0
z
Bo app
z
Bo app
Mz = M0
z
Bo app
Bo app
Mx',y' = M0
y'
y'
y'
B1
x'
Entremoments
instants 1 et
2 2
Between
1 and
B1 pulse
along
x-axis
Impulsion
B1the
selon
x'
Instant 2 2
Moment
EndFin
of the
r.f. pulse
impulsion
Magnetization
has
rotated
= 90
Aimantation a bascul deby
=90C
equilibrium
z
Bo app
M
Mx',y'
x'
Instant 4 4
Moment
Mouvement
prcession
Precessiondemotion
Relaxation
Relaxation
Instant 3 3
Moment
Precession
Mouvement
de motion
prcession
Relaxation
Bo app
Mz
i > 0
x'
x'
x'
Instant 01
Moment
Equilibre
de Boltzmann
Maxwell-Boltzmann
y'
Bo app
Mz = M0
Mx',y'
y'
y'
x'
y'
x'
Relaxation
Relaxation
Instant 5 2
Moment
Maxwell-Boltzmann
Equilibre
de Boltzmann
equilibrium
M0
During time tp, M has rotated = *B1*tp
- pulse angle
- B1 pulse power
- tp pulse duration
y'
x'
y'
x'
B1
The spin system then follows his own evolution in the abscence of B1
M
Mz
Two phenomena :
- free precession around the direction of the field B0 with a frequency 0
Mx',y'
x'
precession
Mz = M0 * (1 - exp(- t/T1))
Cons :
y'
F.T.
F.T.
F.I.D. overlap
4 different frequencies
2 different frequencies
1 high frequency
1 low frequency
digital signal
b) Limitations due to memory size which require the F.I.D. truncation, followed by data improvement
c) Fourier Transform
F(t)
F.I.D.
time
signal
F()
frequency
signal
F.I.D.
F.T.
F(
-
0) =
F(t) * exp(2i(-0)t) dt
0
- a real part
absorption spectrum
- an imaginary part
dispersion spectrum
spectrum
Detection in quadrature-phase
My
Mx
My
t
t
F.T.
s(t)=My cos t
F.T.
0
sw
sw
b) Zero filling
td: time domain: number of points used to digitize the F.I.D. signal and data are stored
si: size of the file containing the data corresponding to the real part of the F.T. of the F.I.D.
aq: acquisition time
aq = td/(2sw)
digital resolution: sw/si
SI=4K
TD=4k
Conventinal processing
190 150 90 50 10 -30
(ppm)
Zero filling
TD=1k
-90
SI=4K
F.I.D. Truncation
TD=256
SI=4K
c) Filters
lb: line-broadening factor
Without filters
30
-10
-50
-90
(ppm)
EM with lb=50Hz
30
(ppm)
EM with lb=500Hz
30
(ppm)
Conventional
NMR spectrum
1H
largeur
pulse
impulsion
duration
10 10
s s
temps
acquisition
d'acquisition
time
retard
acquiqition 11ss
d'acquisition
delay
100 s
100 s
experiment
exprience 2
Intervalle time
de relaxation
relaxation
depends
dpend
de
T
et
de
on T1 and values
1
55to 10 s
Sensitivity improvement
signal
noise
ratio =
T1 relaxation time
T2 relaxation time
T1: spin-lattice (longitudinal) relaxation, loss of energy from the excited nuclear spins to the surrounding
molecular lattice
T2: spin-spin (transverse) relaxation, loss of energy within the spin system (between excited nuclear spins)
a) Spin-lattice or longitudinal relaxation time
1
Different mechanisms
T1
1
T1DD
dipole-dipole
(dipolar)
relaxation
1
T1SR
1
T1Q
1
T1csa
spin
quadrupolar chemical shift
rotation relaxation
anisotropy
relaxation
relaxation
Cl
1
6
Cl
2
3
5
4
Cl
T1
1
T1DD
1H2 * 13C2 * c *
1
RC-H6
Order of magnitude:
1H
T1 1 s
T1 from few ms to 102 s
NMR
13C NMR
1/2 =
with
T2*
1
T2*
1
T2
B0
2
spin-spin
static
relaxation
field
time
inhomogeneity
1
2t
sharp line
broad line
T1
(s)
T2
(ms)
Muscle
0.75
50
Fats
0.25
85
Blood
350
Brain
tumor
Gd-DTPA complex
III Examples
III,1 1H NMR
= 26,752.107 rad.T-1.s-1 The most sensitive and easily observed nucleus
N = 99,985 %,
635.12
631.14
622.30
618.21
693.50
803.62
797.09
876.25
867.74
863.43
854.92
915.17
905.22
903.56
893.50
1092.40
1086.76
1042.76
1039.00
1035.02
1034.13
1030.82
1026.84
1023.30
1022.41
1018.76
1014.78
1146.02
1142.48
1136.07
1132.53
Cl
Cl
Cl H 2 H 1
Cl
H
Cl
H3
Cl
3.8
3.7
3.6
3.5
3.4
3.3
3.2
3.1
3.0
2.9
(ppm)
1.0122
1.0205
1.0200
0.9876
1.0000
H5
2.8
2.7
2.6
2.5
2.4
2.3
2.2
2.1
2.0
Br
HO
7.0
6.5
6.0
5.5
5.0
4.5
4.0
3.5
(ppm)
3.0
2.5
2.0
1.5
1.0
0.5
N = 100 %,
C4H9
F
F F
F F
F F
F H H
Sn
F
F F
F F
F F
C4H9
F H H
C4H9
N = 100 %,
31P
Lower receptivity
Longer acquisition times
NH2
N
H
N
O OH
P OH
O
HO
P
OH
HN C
N CH2COOH
H3C
creatine phosphate
phosphocreatine
O
O
P
OH
O
O
P
OH
N
O
H H
H
H
HO OH
adenosine
triphosphate
(ATP)
adenosine
triphosphate
(ATP)
N = 1,108 %,
Low receptivity,
Long accumulation times
HO
80
75
70
65
60
55
50
45
(ppm)
40
35
30
25
20
15
10
N = 8,58 %,
Low receptivity,
Long accumulation times
119Sn-{1H}
R
O
R
O
II
F2Sn
SnF2 + Sn(OR)4
R=
-400
-420
-440
-460
-480
-500
-520
119Sn-{1H}
NMR spectrum
tBu, tAm
-540
-560
(ppm)
-580
IV
SnOR
O
R
-600
-620
-640
-660
-680
-700
-720
120
80
40
-40
-80
-120
-160
(ppm)
-200
-240
-280
-320
-360
-400
-440