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Clin Genet 2014: 85: 555561 2013 John Wiley & Sons A/S.

Printed in Singapore. All rights reserved Published by John Wiley & Sons Ltd
CLINICAL GENETICS
doi: 10.1111/cge.12227

Short Report

Retrospective study of the medium-chain


acyl-CoA dehydrogenase deficiency
in Portugal

Ventura F.V., Leandro P., Luz A., Rivera I.A., Silva M.F.B., Ramos R., F.V. Venturaa,b, , P.
Rocha H., Lopes A., Fonseca H., Gaspar A., Diogo L., Martins E., Leandroa,b, , A. Luza,b , I.A.
Leao-Teles E., Vilarinho L., Tavares de Almeida I. Retrospective study of Riveraa,b , M.F.B. Silvaa,b , R.
the medium-chain acyl-CoA dehydrogenase deficiency in Portugal. Ramosa,b , H. Rochac , A.
Clin Genet 2014: 85: 555561. John Wiley & Sons A/S. Published by Lopesc , H. Fonsecac , A.
John Wiley & Sons Ltd, 2013 Gaspard , L. Diogoe , E. Martinsf ,
Medium-chain acyl-CoA dehydrogenase deficiency (MCADD) is the E. Leao-Telesg , L. Vilarinhoc
commonest genetic defect of mitochondrial fatty acid -oxidation. About and I. Tavares de Almeidaa
60% of MCADD patients are homozygous for the c.985A>G a
Metabolism and Genetics Group,
(p.Lys329Glu) mutation in the ACADM gene (G985 allele). Herein, we Research Institute for Medicines and
present the first report on the molecular and biochemical spectrum of Pharmaceutical Sciences, iMed.UL,
Portuguese MCADD population. From the 109 patients studied, 83 were Faculty of Pharmacy, b Department of
diagnosed after inclusion of MCADD in the national newborn screening, 8 Biochemistry and Human Biology, Faculty
following the onset of symptoms and 18 through segregation studies. of Pharmacy, University of Lisbon,
Gypsy ancestry was identified in 85/109 patients. The G985 allele was Lisbon, Portugal, c Newborn Screening,
found in homozygosity in 102/109 patients, in compound heterozygosity in Metabolism and Genetics Unit, Genetics
Department, National Institute of Health
6/109 and was absent in one patient. Segregation studies in the Gypsy
Dr. Ricardo Jorge, Porto, Portugal,
families showed that 93/123 relatives were carriers of the G985 allele, d Department of Pediatrics, Lisbon North
suggesting its high prevalence in this ethnic group. Additionally, three new Hospital Center, Santa Maria Hospital,
substitutions c.218A>G (p.Tyr73Cys), c.503A>T (p.Asp168Val) and Lisbon, Portugal, e Childrens Hospital of
c.1205G>T (p.Gly402Val) were identified. Despite the particularity of Coimbra, Metabolic Disorders Unit,
the MCADD population investigated, the G985 allele was found in linkage Coimbra, Portugal, f Childrens Hospital
disequilibrium with H1(112) haplotype. Furthermore, two novel Maria Pia, Metabolic Diseases Unit,
haplotypes, H5(212) and H6(122) were revealed. Porto, Portugal, and g S. Joao Hospital
Center, Metabolic Diseases Pediatric
Conflict of interest Unit, Porto, Portugal

The authors report no conflict of interests.


These two authors contributed
equivalently to this work.

Key words: ACADM inborn errors of


metabolism MCAD mitochondrial
fatty acid -oxidation disorders
newborn screening

Corresponding author: Fatima V.


Ventura, Metabolism and Genetics
Group, Research Institute for Medicines
and Pharmaceutical Sciences, iMed.UL,
Faculdade de Farmacia, Universidade
de Lisboa, Av. Prof. Gama Pinto,
1649-003 Lisbon, Portugal.
Tel.: +351 21 7946400;
fax: +351 21 7946491;

555
Ventura et al.

e-mail: fatima.ventura@ff.ul.pt

Received 24 April 2013, revised and


accepted for publication 2 July 2013

Medium-chain acyl-CoA dehydrogenase deficiency determined the ACADM haplotype pattern among the
(MCADD, OMIM #201450) is one of the most frequent studied population.
inborn errors of metabolism (IEM) affecting North-
western European descent Caucasians. It results from
an altered activity of medium-chain acyl-CoA dehy- Materials and methods
drogenase (MCAD; EC 1.3.99.3), which catalyzes the Population selection
first step of mitochondrial -oxidation of C4C14 fatty
acids (1). MCADD patients present recurrent hypoke- This study enrolled 236 individuals, comprising all
totic hypoglycemia, lethargy and Reye-like syndrome MCADD patients diagnosed since 1994 to date, after
but affected individuals may remain asymptomatic until clinical onset or by NBS since 2004, and whenever
metabolically challenged. The disease long-term man- possible their parents and siblings (Table 1). Informed
agement mainly entails avoidance of fasting (1). consent was obtained from all individuals.
Biochemical diagnosis of MCADD is often problem-
atic, since the characteristic abnormal profiles of urinary Metabolites analysis
medium-chain dicarboxylic acids and acylglycines are
less evident or even absent between decompensation Acylcarnitine profiles were analyzed by electrospray
periods. The introduction of more sensitive and specific ionization with tandem mass spectrometry (ESI-
diagnostic tools such as the tandem mass spectrometry MS/MS), in DBS collected after 36 days from birth.
(MS/MS) allowed the establishment of pathognomonic Values above laboratorys cutoff (Table 2) were
acylcarnitine profiles in dried blood spots (DBS) and repeated in duplicate using the same DBS. Urinary
therefore the pre-symptomatic identification of mito- organic acids and acylglycines plus plasma free
chondrial fatty acid -oxidation disorders by extended fatty acids were analyzed by GC-MS for diagnostic
newborn screening (NBS) programs. This has been confirmation.
leading to the detection of far more MCADD cases by
NBS than by clinical onset. Moreover, NBS facilitates,
Mutation analysis of the ACADM gene
particularly through segregation studies, the identifica-
tion of carriers and asymptomatic new cases. Nonethe- DNA was isolated from whole blood or DBS. Muta-
less, serious life-threatening metabolic crises have been tion c.985A>G was firstly screened by amplification-
reported among screened individuals, indicating that created restriction site analysis (Table S1) according
despite precociously identified, prognosis may still be to established methods (8). All ACADM exons and
unfavorable (2). adjacent intronic regions were amplified by polymerase
The MCADD diagnosis through NBS also revealed chain reaction (PCR) using specific oligonucleotides
a wide ACADM gene heterogeneity (3): around 100 (sequences available upon request), further purified and
different mutations were reported for MCADD (Public sequenced.

Human Gene Mutation Database , Cardiff, UK), being Haplotypes in ACADM gene were established after
mostly rare missense mutations correlated with milder PCRRFLP analysis of the intragenic bi-allelic poly-
phenotypes or with protein folding and aggregation morphisms for BamHI, PstI and TaqI (5, 6) (Table
defects (3). S1). Haplotype nomenclature was established according
The c.985A>G transition (G985 allele) resulting in to Zhang et al. (5) (Table 3).
the p.Lys329Glu variant is the most prevalent disease-
causing ACADM mutation [5491% allele frequency
Results
and 3080% homozygosity (4)]. Four different hap-
lotypes (H1H4), defined by the bi-allelic polymor- Since 1994, 109 individuals were diagnosed as
phisms for BamHI, PstI and TaqI, were associated MCADD in Portugal, being 91 index cases (83 asymp-
with ACADM . The G985 allele has been found in link- tomatic detected by NBS and 8 after clinical onset) and
age disequilibrium with haplotype H1, supporting the 18 identified through segregation studies. Interestingly,
origin of this mutation from a single ancestral allele 85/109 patients had Gypsy ancestry and 68/109 were
(57). females. The remaining were of non-Gypsy Portuguese
While the MCADD molecular basis has been exten- (20/109), Brazilian (3/109) and Argentinean (1/109)
sively studied in several populations, the mutational origin (Fig. 1, Table 1).
background in Portugal was so far unknown. We present The G985 allele was identified in homozygosity in
the first report on the Portuguese MCADD population. 102/109 patients, compound heterozygosity in 6/109
We characterized the biochemical and molecular pro- and was absent in one patient. All but one Gypsy patient
files of index cases, performed segregation studies and were homozygous for this allele. Amongst the Gypsy

556
Retrospective study of the medium-chain acyl-CoA dehydrogenase deficiency
Table 1. Distribution of MCADD patients according to patients type, ethnicity, gender, type of diagnosis, presence of
clinical/biochemical phenotype at the time of diagnosis and age at diagnosis as function of number of patients, genotype and
ethnicity

Compound Compound
Homozygous heterozygous heterozygous
Characterization Patients (n) G985 (n) G985/mut (n) mut1/mut2 (n) Gypsies (n) Non-Gypsies (n)a

Patients type
Index case 91 84 6 1 67 24
Family member 18 18 18
Ethnicity
Gypsies 85 84 1
Non-Gypsies 24 18 5 1
Gender
Male 41 41 32 9
Female 68 61 6 1 53 15
Diagnosis
Before NBS 9 7 1 1 7 2
Clin/Biochemb 9 7 1 1 7 2
Familial studies 1c 1c 1c
After NBS 100 95 5 78 22
Index case 83 78 5 61 22
Familial studies 17 17 17
Symptomatic 9 7 1 1 7 2
Asymptomatic 100 95 5 78 22
Age at diagnosis
Newborn
<12 months 83 78 5 61 22
12 years 3 2 1 2 1
310 years 5 5 5
>11 years 5 4 1 4 1
Adults 1 1 1
Unknown 7 7 7
5 5 5

MCADD, Medium-chain acyl-CoA dehydrogenase deficiency; NBS, newborn screening; mut, mutant allele.
a Non-Gypsies patients: 1 Argentinean, 3 Brazilian, and 20 Portuguese.
b
Clin/Biochem, Clinical/Biochemical phenotype.
c
One patient diagnosed before NBS expansion through familial studies presented clinical and biochemical phenotype.

families investigated (n = 123 individuals), 93 members the patient with the genotype c.985A>G/c.1205G>T,
were carriers for the G985 allele, while 18 (11 siblings, the novel mutation was transmitted by the father with
2 fathers and 5 mothers), apparently asymptomatic, the silent mutation c.351A>C.
were also homozygous for c.985A>G (Fig. 1b, Table Haplotype characterization of ACADM gene was
1). Interestingly, MCADD mothers had eventfulness performed in 50 patients and relatives (n = 107,
pregnancies and are so far asymptomatic. corresponding to 140 independent alleles). The G985
Genomic DNA analysis in non-homozygous allele was found exclusively associated with H1 haplo-
patients for the G985 allele allowed the identifica- type which was also the most frequent among the wild-
tion of additional mutations (Table 4): three novel type alleles (51%). The novel mutation c.1205G>T was
[c.218A>G (p.Tyr73Cys), c.503A>T (p.Asp168Val), associated with H4 haplotype. Besides the previously
and c.1205G>T (p.Gly402Val)]; and five previously described haplotypes, two novel haplotypes, H5 and H6,
described [c.250C>T (p.Leu84Phe), c.351A>C were also identified in G985 carriers (Table 3).
(p.Thr117Thr), c.1045C>T (p.Arg349X), c.1161A>G Data on DBS acylcarnitine species with MCADD
(p.Val387Val) and c.1189_1190insT (p.Tyr372fs)]. The diagnostic significance are shown in Table 2. Our results
G985 allele was found in heterozygosity with the G218, also support the finding that C8-acylcarnitine is the
T503, 1189_1190insT and T1205 alleles, remaining to main MCADD biomarker in NBS (9). Even the low-
identify the second mutant allele in two patients. The est detected level (0.76 mol/l) was clearly above the
c.250C>T/c.1045C>T genotype was also found and laboratorys cutoff (<0.24 mol/l); C6 was only slightly
segregation studies confirmed its inheritance in trans. increased in 2/69 patients (<0.12 mol/l) and C10 was
In this patient, the polymorphism IVS3+10T/C and below cutoff (<0.39 mol/l) in 33/69 patients. C8/C2
the silent mutation c.1161A>G were also identified in ratio of >0.1 and C8/C10 ratio of 7 were observed
cis with c.250C>T and c.1045C>T, respectively. In for, respectively, 91% and 83% of MCADD patients

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Ventura et al.
Table 2. Genotype versus C6C10 acylcarnitines determined in dried blood spots (DBS) at newborn screening (NBS)

Acylcarnitines (mol/l)a
C6 C8 C10 C8/C2 C8/C10
Genotype Patients (n) Rf<0.12 Rf<0.24 Rf<0.39 Rf<0.035 Rf<2.00

c.985A>G/c.985A>G 64 0.71 4.02 0.41 0.26 9.89


(0.192.80) (0.7620.7) (0.141.34) (0.070.76) (3.823.4)
0.35 (P10) 1.83 (P10) 0.20 (P10) 0.13 (P10) 7.22 (P10)
1.13 (P90) 9.00 (P90) 0.90 (P90) 0.45 (P90) 12.97 (P90)
c.985A>G/c.1189-1190insT 1 0.75 4.95 0.53 0.3 9.42
(P57) (P61) (P62) (P61) (P43)
c.985A>G/c. 218A>G 1 0.48 1.97 0.79 0.05 2.5
(P28) (P16) (P85) (P0) (P0)
c.985A>G/c.1205G>T 1 0.48 1.72 0.31 0.14 5.4
(P28) (P9) (P31) (P13) (P6)
c.985A>G/mut1 1 0.66 4.64 0.39 0.24 11.8
(P49) (P58) (P43) (P43) (P78)
c.985A>G/mut2 1 0.51 1.68 0.54 0.08 3.12
(P33) (P7) (P66) (P4) (P1)

Acylcarnitines: C6, hexanoylcarnitine; C8, octanoylcarnitine; C10, decanoylcarnitine; C8/C2, octanoyl:acetylcarnitine ratio; C8/C10,
octanoyl:decanoylcarnitine ratio; Rf, reference value (99.5th percentile of screened population); mut, mutant allele under investigation.
a For the c.985A>G/c.985A>G genotype the values indicated are the median of acylcarnitines measured, the respective range (in

brackets) and the values corresponding to the 10th and 90th percentiles. For the other genotypes it is indicated in brackets the
percentile of the obtained value taking in account the acylcarnitines values collected for 69 index cases. Mutation nomenclature
is according to HGVS (http://www.hgvs.org/mutnomen/) with NM_000016.4 and NG_007045.1 as reference sequences for the
ACADM cDNA and genomic sequence, respectively. Only 3/69 MCADD patients revealed values close to globally used cutoff for C8
(<1 mol/l) and C8/C10 ratio (<3.5); no patient presented C8/C2 values close to globally used cutoff (<0.02). In contrast, 31/69 and
47/69 patients presented values close to globally used cutoff for C6 (<0.59 mol/l) and C10 (<0.55 mol/l), respectively.

Table 3. Haplotype determination in the ACADM locus in 50 MCADD index cases and respective families based on RFLP for BamHI,
PstI and TaqI

No. of observations
Allelesa Absolute frequency
(mutant + control alleles)
Haplotype (H) BamHI PstI TaqI (n = 140) Mutant alleles (n = 73) Control alleles (n = 67)
b
1 1 1 2 107 0.99 0.51
2 2 1 1 13 0 0.19
3 1 2 1 7 0 0.1
4 1 1 1 3 0.01c 0.05
5 1 2 2 8 0 0.12
6 2 1 2 2 0 0.03
a
Allele 1 corresponds to the most frequent allele (presence of restriction site for BamHI and TaqI and absence for PstI), while allele
2 is the least frequent allele (absence of recognition for BamHI and TaqI and presence for PstI) (6).
b Mutant allele G985 allele.
c Mutant allele T1205 allele; See Materials and Methods for more details.

homozygous for c.985A>G. Correlations between the presence of urinary adipic, suberic or sebacic acids
genotype and biochemical phenotype are difficult to were consistent with MCADD (data not shown).
establish in compound heterozygotes. However, C8,
C8/C2 and C8/C10 data suggest milder phenotypes Discussion
for c.985A>G/c.218A>G, c.985A>G/c.1205G>T and
c.985A>G/mut2 genotypes. This study is based on a retrospective analysis
Urinary acylglycines were evaluated for diagnostic (19942013) of molecular and metabolic data of 236
individuals. To our knowledge, this group includes
confirmation (n = 24). In our GC-MS system, hex- all MCADD patients identified in Portugal and when
anoylglycine ranged between 0.7 and 140.7 mol/mmol possible their families. Segregation studies contributed
creatinine in patients (Fig. 2) and was never detected to the identification of a high number of individu-
in controls. Suberylglycine was virtually not detected. als who, despite apparently asymptomatic, also pre-
Elevated levels of plasma octanoic (C8:0), cis-4- sented a MCADD compatible genotype. Currently, this
decenoic (C10:1-n6) and dodecanoic (C12:0) acids and group represents 17% of the Portuguese MCADD cases,

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Retrospective study of the medium-chain acyl-CoA dehydrogenase deficiency
Table 4. Mutations in the ACADM gene, detected in MCADD patients identified in Portugal*

Nucleotide Predicted
changea protein change Exon Sympt. NBS Patients (n) POLYPHEN36 Align_GVGD37 SIFT38 Ref.b

c. 218A>G p.Tyr73Cys 3 N Y 1 D D+ D This study


c.250C>T p.Leu84Phe 4 Y N 1 P D D HGMD
c.351A>C p.Thr117Thr 5 N Y 1 ND ND B Ensembl
c.503A>T p.Asp168Val 7 Y N 1 D D+ D This study
c.985A>G p.Lys329Glu 11 Y/N Y/N 101 B D B HGMD
c.1045C>T p.Arg349X 11 Y N 1 ND ND ND HGMD
c.1161A>G p.Val387Val 11 Y N 1 ND ND B This study
c.1189_1190insT p.Tyr397fs 11 Y N 1 ND ND ND Ensembl
c.1205T>G p.Gly402Val 12 N Y 1 D D+ D This study

MCADD, Medium-chain acyl-CoA dehydrogenase deficiency; NBS, newborn screening.


a For mutation nomenclature see footnote of Table 2. Protein ID for the MCAD protein is P11310; Sympt., signs and symptoms

suggestive of MCADD; NBS, mutation detected after NBS; Y, yes; N, no. In silico assessment of variants pathogenic potential
performed with the softwares POLYPHEN (http://genetics.bwh.harvard.edu/pph/; Predictions: B = benign; P = possibility damaging;
D = probably damaging); Sorting Intolerant from Tolerant (SIFT; http://sift.jcvi.org/; Predictions: B = tolerated; D = damaging); and
Align_GVGD [http://agvgd.iarc.fr/agvgd_input.php; class 015 = benign (B), class 2535 = possibly damaging (P), class 4555 =
probably damaging (D); class 65 = damaging (D+)]; ND not determined.
b Reference of the first report for the mutation; references to already described mutations in the ACADM gene can be found in Public

Human Gene Mutation Database (HGMD), Cardiff, UK or Ensembl (http://www.ensembl.org/). Adapted from (17, 18).
*[Correction added on 10 December 2013, after first online publication: Table 4 has now been replaced due to errors in the values of
the earlier version.]

Fig. 2. Levels of urinary hexanoylglycine (C6 glycine) expressed as


mol/mmol creatinine in c.985A>G/c.985A>G patients diagnosed
at NBS. The dotted line represents the median value. Reference
laboratory value is below the limit of quantification. The three lowest
values correspond to 0.7, 1.5 and 1.7 mol/mmol creatinine while the
three highest values correspond to 47.8, 140.7 and 109.6 mol/mmol
creatinine.

gathered since then (>500,000 newborns) (11) show


a MCADD birth prevalence of 1:8804, a value higher
Fig. 1. Distribution of Medium-chain acyl-CoA dehydrogenase defi- than described worldwide (4). Comparing with birth-
ciency (MCADD) patients according to (a) gender, origin, and age at
diagnosis; (b) symptoms, type of patient (index or following segrega- prevalence of phenylketonuria reported in the same
tion studies) and type of diagnosis [before or after newborn screening period (1:10,000) (11), MCADD is currently the most
(NBS) expansion]; NK, not known; NB(S), newborn (screening). frequent IEM in the country.
Information concerning the MCADD prevalence in
Mediterranean countries is scarce being reported as rare
stressing the potential benign outcome of MCADD, in France (12) and Spain (13), where the majority of
and the importance of segregation studies following an patients are of Gypsy origin. Our data also support
index case identification. these observations, as 78% of the patients are Gypsies,
Most patients (92%) were identified since 2004, suggesting that MCADD patients in Southern-European
after the expansion of NBS (10). Surprisingly, the data countries are mostly of Gypsy ancestry.

559
Ventura et al.
The c.985A>G mutation was found in homozygosity picture. MCADD is now the most frequent IEM
in 94% of the patients, a much higher frequency than among screened newborns. Furthermore, our study
reported for other populations (60%) (4). However, describes the particular situation related to the Gypsy
it must be stressed that 82% of these patients have origin of the majority of the patients. Interestingly,
Gypsy origin and 99% of those share this common although from a closed community, the ACADM
genotype. Amongst the Gypsy families, 76% of the genetic background in Gypsy patients c.985A>G
individuals were carriers of the c.985A>G mutation, homozygosity and haplotype H1 is the same as
suggesting a high frequency of the G985 allele in this for North-western European MCADD patients. This
ethnic group. The common mutation was also found in strongly supports c.985A>G as an ancient mutation
homozygosity in 75% of the 24 non-Gypsy patients. arising in a common ancestor of the first Europeans.
Curiously, this mutation was also identified in three
Brazilian descents: in homozygosity (n = 2) and in
compound heterozygosity with a novel mutation (n = 1; Supporting Information
c.1205G>T). This contrasts with a recent Brazilian The following Supporting information is available for this article:
study, where the G985 allele showed a very low allelic
frequency without homozygotes being found (14). Fig S1. Two novel mutations: c.503A>T (p.Asp168Val) in exon
7 (a) and c.1205G>T (p.Gly402Val) in exon 12 (b) identified by
Haplotype characterization of the ACADM gene
DNA sequencing of two patients heterozygous for the c.985AG
(5, 6), performed when possible in MCADD patients mutation. See Materials and Methods for more details. The mutated
and families, consistently revealed a H1 haplotype base is indicated by an arrow.
homozygosity for the c.985A>G/c.985A>G genotype, Table S1. Oligonucleotides used for the screening of the c.985A>G
as previously described (5, 6), while the novel mutation mutation and for haplotype identification in the ACADM gene
c.1205G>T was associated with H4 haplotype. Though
Additional Supporting information may be found in the online
H1 is the most frequent haplotype among wild-type version of this article.
alleles, two novel haplotypes (H5 and H6) were
also identified. These results show that the G985
allele is in linkage disequilibrium with H1 haplotype, Acknowledgements
strongly suggesting that both in Gypsy and non-
Gypsy populations this mutation presents a common We are grateful to Doctor Marinus Duran and Doctor Sara
source. The origin of the Roma people in the Indian Violante for comments and critical reading of the manuscript. We
acknowledge the technical assistance of F. Louro, F. Lopes, I.
subcontinent (15), their migration history and the results Lopes, J. Nunes, A. Serrao and M. Moedas. Part of this work
herein obtained, corroborate the hypothesis that Indo- was financially supported by the Portuguese Society for Metabolic
European speaking people introduced in Europe the Disorders, through a project awarded to FV Ventura and by the
c.985A>G mutation (16). Fundacao para a Ciencia e Tecnologia, Lisboa, Portugal, through
Among the patients studied, 6% were non- the strategic project PEst-OE/SAU/UI4013/2011 to iMed.UL.
homozygous for the G985 allele and all but one
were compound heterozygotes holding the c.985A>G
mutation in one allele and a rare mutation in the References
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