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Codominant data template Pop1 Pop2 Pop3 Pop4 Region1
Sample Pop Locus1 Locus2 Locus3 Locus4
140 140 176 178 182 182 214 216
1 Pop1
140 140 160 162 184 184 218 220
2 Pop1
142 140 150 150 192 192 216 218
3 Pop1
142 142 178 178 184 184 216 216
4 Pop1
142 142 176 178 184 184 216 216
5 Pop1
140 142 176 178 190 190 216 216
6 Pop2
142 142 150 178 184 182 216 216
7 Pop2
142 142 150 150 190 192 216 214
8 Pop2
142 142 150 150 190 190 208 216
9 Pop2
142 142 176 178 184 184 216 216
10 Pop2
142 142 176 178 190 192 216 218
11 Pop3
142 142 176 178 188 190 216 218
12 Pop3
142 142 176 178 182 182 216 216
13 Pop3
142 146 176 178 182 182 216 216
14 Pop3
142 142 176 178 182 182 216 220
15 Pop3
142 142 176 178 182 186 208 216
16 Pop3
142 142 178 150 182 184 216 216
17 Pop4
142 142 174 178 182 182 216 216
18 Pop4
142 142 176 178 184 184 216 216
19 Pop4
142 142 174 178 182 182 214 216
20 Pop4
Locus5 Locus6 Locus7 Locus8
110 112 146 146 354 354 228 228
108 116 146 146 354 354 228 228
108 108 146 164 352 354 220 228
108 108 146 146 354 356 226 228
108 112 146 146 354 356 226 228
108 114 146 160 352 354 220 228
108 114 146 160 354 366 228 228
112 114 146 164 354 366 228 234
104 112 146 160 352 354 228 234
106 108 146 146 354 354 228 234
104 112 146 160 352 354 228 228
104 112 146 160 354 352 228 234
108 108 140 146 354 354 226 228
108 108 146 146 354 356 226 228
104 108 146 146 354 356 226 228
106 108 146 146 354 356 226 228
106 108 146 146 356 354 228 228
106 108 146 146 356 354 228 228
104 108 146 146 354 356 226 228
106 108 146 146 354 356 228 228
Allele Frequencies by Population for Codominant Data
No. Loci 8
No. Samples 20
No. Pops. 4
No. Loci 8
No. Samples 20
No. Pops. 4
Allele Frequency
1.200
1.000
0.800
0.600
0.400 Pop1
Frequency
0.200
0.000 Pop2
Pop3
142
150
162
176
182
186
208
216
220
106
110
140
160
352
356
220
228
190
114
Locus1 Locus2 Locus3 Locus4 Locus5 Locus6 Locus7 Locus8 Pop4
Locus
Locus8 Pop4
Allele Frequencies with Graphs by Population and Locus for Codominant Data
No. Loci 8
No. Samples 20
No. Pops. 4
0.600
Pop2
0.400
Pop3
0.200
0.000 Pop4
140 142 146
Locus1
Locus
0.300
Pop2
0.200
Pop3
0.100
0.000 Pop4
150 160 162 174 176 178
Locus2
Locus
0.300 Pop2
0.200 Pop3
0.100
0.000 Pop4
182 184 186 188 190 192
Locus3
Locus
0.400 Pop2
0.200 Pop3
0.000 Pop4
208 214 216 218 220
Locus4
Locus
0.300 Pop2
0.200 Pop3
0.100
0.000 Pop4
104 106 108 110 112 114 116
Locus5
Locus
0.600
Pop2
0.400
Pop3
0.200
0.000 Pop4
140 146 160 164
Locus6
Locus
0.400
Pop2
0.200 Pop3
0.000 Pop4
352 354 356 366
Locus7
Locus
Pop4
F
0.000
352 354 356 366
Locus7
Locus
0.400 Pop2
0.200 Pop3
0.000 Pop4
220 226 228 234
Locus8
Locus
Pop1
Pop2
Pop3
Pop4
178
Pop1
Pop2
Pop3
Pop4
192
Pop1
Pop1
Pop2
Pop3
Pop4
20
Pop1
Pop2
Pop3
Pop4
116
Pop1
Pop2
Pop3
Pop4
Pop1
Pop2
Pop3
Pop4
Pop4
Pop1
Pop2
Pop3
Pop4
Allele Frequencies at Locus1 with Graphs by Population for Codominant Data
No. Loci 8
No. Samples 20
No. Pops. 4
140; 10.00%
142; 90.00%
146; 8.33%
142; 91.67%
142; 100.00%
Allele Pop1
140 0.500
142 0.500
146 0.000
Allele Pop2
140 0.100
142 0.900
146 0.000
Allele Pop3
140 0.000
142 0.917
146 0.083
Allele Pop4
140 0.000
142 1.000
146 0.000
No. Loci 8
No. Samples 20
No. Pops. 4
150; 20.00%
178; 40.00%
160; 10.00%
162; 10.00%
176; 20.00%
178; 30.00%
150; 50.00%
176; 20.00%
150; 12.50%
Allele Frequency at Locus2 for Pop4 (n=4)
150; 12.50%
176; 12.50%
Allele Pop1
150 0.200
160 0.100
162 0.100
174 0.000
176 0.200
178 0.400
Allele Pop2
150 0.500
160 0.000
162 0.000
174 0.000
176 0.200
178 0.300
Allele Pop3
150 0.000
160 0.000
162 0.000
174 0.000
176 0.500
178 0.500
Allele Pop4
150 0.125
160 0.000
162 0.000
174 0.250
176 0.125
178 0.500
No. Loci 8
No. Samples 20
No. Pops. 4
184; 60.00%
184; 30.00%
190; 50.00%
192; 8.33%
190; 16.67%
184; 37.50%
182; 62.50%
Allele Pop1
182 0.200
184 0.600
186 0.000
188 0.000
190 0.000
192 0.200
Allele Pop2
182 0.100
184 0.300
186 0.000
188 0.000
190 0.500
192 0.100
Allele Pop3
182 0.583
184 0.000
186 0.083
188 0.083
190 0.167
192 0.083
Allele Pop4
182 0.625
184 0.375
186 0.000
188 0.000
190 0.000
192 0.000
No. Loci 8
No. Samples 20
No. Pops. 4
218; 20.00%
216; 60.00%
208; 10.00%
214; 10.00%
216; 80.00%
218; 16.67%
216; 66.67%
214; 12.50%
Allele Frequency at Locus4 for Pop4 (n=4)
214; 12.50%
216; 87.50%
Allele Pop1
208 0.000
214 0.100
216 0.600
218 0.200
220 0.100
Allele Pop2
208 0.100
214 0.100
216 0.800
218 0.000
220 0.000
Allele Pop3
208 0.083
214 0.000
216 0.667
218 0.167
220 0.083
Allele Pop4
208 0.000
214 0.125
216 0.875
218 0.000
220 0.000
No. Loci 8
No. Samples 20
No. Pops. 4
116; 10.00%
112; 20.00%
108; 60.00%
110; 10.00%
104; 10.00%
106; 10.00%
114; 30.00%
108; 30.00%
112; 20.00%
112; 16.67%
104; 25.00%
106; 8.33%
108; 50.00%
104; 12.50%
Allele Frequency at Locus5 for Pop4 (n=4)
104; 12.50%
108; 50.00%
106; 37.50%
Allele Pop1
104 0.000
106 0.000
108 0.600
110 0.100
112 0.200
114 0.000
116 0.100
Allele Pop2
104 0.100
106 0.100
108 0.300
110 0.000
112 0.200
114 0.300
116 0.000
Allele Pop3
104 0.250
106 0.083
108 0.500
110 0.000
112 0.167
114 0.000
116 0.000
Allele Pop4
104 0.125
106 0.375
108 0.500
110 0.000
112 0.000
114 0.000
116 0.000
No. Loci 8
No. Samples 20
No. Pops. 4
164; 10.00%
146; 90.00%
164; 10.00%
160; 30.00%
146; 60.00%
146; 75.00%
146; 100.00%
Allele Pop1
140 0.000
146 0.900
160 0.000
164 0.100
Allele Pop2
140 0.000
146 0.600
160 0.300
164 0.100
Allele Pop3
140 0.083
146 0.750
160 0.167
164 0.000
Allele Pop4
140 0.000
146 1.000
160 0.000
164 0.000
No. Loci 8
No. Samples 20
No. Pops. 4
352; 10.00%
356; 20.00%
354; 70.00%
354; 60.00%
352; 16.67%
356; 25.00%
354; 58.33%
Allele Pop1
352 0.100
354 0.700
356 0.200
366 0.000
Allele Pop2
352 0.200
354 0.600
356 0.000
366 0.200
Allele Pop3
352 0.167
354 0.583
356 0.250
366 0.000
Allele Pop4
352 0.000
354 0.500
356 0.500
366 0.000
No. Loci 8
No. Samples 20
No. Pops. 4
220; 10.00%
226; 20.00%
228; 70.00%
220; 10.00%
234; 30.00%
228; 60.00%
234; 8.33%
226; 33.33%
228; 58.33%
226; 12.50%
Allele Frequency at Locus8 for Pop4 (n=4)
226; 12.50%
228; 87.50%
Allele Pop1
220 0.100
226 0.200
228 0.700
234 0.000
Allele Pop2
220 0.100
226 0.000
228 0.600
234 0.300
Allele Pop3
220 0.000
226 0.333
228 0.583
234 0.083
Allele Pop4
220 0.000
226 0.125
228 0.875
234 0.000
No. Loci 8
No. Samples 20
No. Pops. 4
0.100
0.200
0.700
0.000
5
0.100
0.000
0.600
0.300
6
0.000
0.333
0.583
0.083
4
0.000
0.125
0.875
0.000
Heterozygosity, Fstatistics and Polymorphism by Population for Codominant Data
No. Loci 8
No. Samples 20
No. Pops. 4
Sample Size, No. Alleles, No. Effective Alleles, Information Index, Observed Heterozygosity, Expected and Unbiased Expected
Pop N Na Ne I Ho He uHe
Pop1 Mean 5.000 3.250 2.226 0.903 0.425 0.508 0.564
SE 0.000 0.366 0.268 0.119 0.088 0.057 0.063
N Na Ne I Ho He uHe
Total Mean 5.000 2.969 2.107 0.809 0.541 0.464 0.515
SE 0.127 0.188 0.130 0.067 0.056 0.035 0.039
Population %P
Pop1 100.00%
Pop2 100.00%
Pop3 100.00%
Pop4 75.00%
Mean 93.75%
SE 6.25%
Tip: Choose the Step by Step option to show Mean He, Mean Ho and Ht values.
Note:
Warning! Results should be treated with caution given the following:
The sample size in the population Pop4 is less than 5!
Expected and Unbiased Expected Heterozygosity, and Fixation Index
F
0.600
0.189
1.000
-0.034
-0.034
-0.111
-0.304
-0.304
-0.111
0.032
0.375
-0.176
-0.316
-0.481
-0.429
-0.481
-0.091
-1.000
0.182
-0.297
-0.021
-0.241
-0.463
-0.538
#N/A
-0.524
0.467
-0.143
-0.684
#N/A
-1.000
-0.143
F
0.125
0.162
-0.198
0.105
-0.309
0.129
-0.338
0.181
F
-0.170
0.076
squared population allele frequencies.
le for the total & Sum tpi^2 is the sum of the squared total allele frequencies.
Heterozygosity, Fstatistics and Polymorphism by Locus for Codominant Data
No. Loci 8
No. Samples 20
No. Pops. 4
Sample Size, No. Alleles, No. Effective Alleles, Information Index, Observed Heterozygosity, Expected and Unbiased Expected
Total
N Mean 5.000
SE 0.127
Na Mean 2.969
SE 0.188
Ne Mean 2.107
SE 0.130
I Mean 0.809
SE 0.067
Ho Mean 0.541
SE 0.056
He Mean 0.464
SE 0.035
uHe Mean 0.515
SE 0.039
F Mean -0.170
SE 0.076
Population %P
Pop1 100.00%
Pop2 100.00%
Pop3 100.00%
Pop4 75.00%
Mean 93.75%
SE 6.25%
Tip: Choose the Step by Step option to show Mean He, Mean Ho and Ht values.
Note:
Warning! Results should be treated with caution given the following:
The sample size in the population Pop4 is less than 5!
Expected and Unbiased Expected Heterozygosity, and Fixation Index
Locus8
5
3
1.852
0.802
0.600
0.460
0.511
-0.304
5
3
2.174
0.898
0.800
0.540
0.600
-0.481
6
3
2.182
0.888
0.833
0.542
0.591
-0.538
4
2
1.280
0.377
0.250
0.219
0.250
-0.143
Locus8
5.000
0.408
2.750
0.250
1.872
0.212
0.741
0.123
0.621
0.134
0.440
0.076
0.488
0.082
-0.367
0.090
Locus8 Mean SE
-0.411 -0.147 0.129
-0.278 -0.013 0.129
0.094 0.133 0.026
le for the total & Sum tpi^2 is the sum of the squared total allele frequencies.
Allelic Patterns for Codominant Data
No. Loci 8
No. Samples 20
No. Pops. 4
Heterozygosity
0.400 Ne
2.000
0.300 I
Mean
1.500
1.000 0.200 No. Private Alleles
0.500 0.100 No. LComm Alleles (<=25%)
0.000 0.000 No. LComm Alleles (<=50%)
Pop1 Pop2 Pop3 Pop4 He
Populations
Mean values
Population Pop1 Pop2 Pop3 Pop4
Na 3.250 3.250 3.250 2.125
Na Freq. >= 5% 3.250 3.250 3.250 2.125
Ne 2.226 2.366 2.108 1.727
I 0.903 0.927 0.871 0.537
No. Private Alleles 0.500 0.250 0.500 0.125
No. LComm Alleles (<=25%) 0.000 0.000 0.000 0.000
No. LComm Alleles (<=50%) 0.625 0.875 0.750 0.000
He 0.508 0.523 0.493 0.332
uHe 0.564 0.581 0.538 0.379
ate Alleles
mm Alleles (<=25%)
mm Alleles (<=50%)
wer Populations
wer Populations
Allele List for Codominant Data
No. Loci 8
No. Samples 20
No. Pops. 4
No. Loci 8
No. Samples 20
No. Pops. 4
No. Loci 8
No. Samples 20
No. Pops. 4
Nei Genetic Distance = -1 * Ln(Nei Identity). Nei Unbiased Genetic Distance = -1 * Ln(Nei Unbiased Identity).
Tip: Choose the Step by Step option to show full calculation steps and additional formulas.
No. Samples 20
No. Pops 4
No. Loci 8
No. Samples 20
No. Pops. 4
Nei Genetic Distance = -1 * Ln(Nei Identity). Nei Unbiased Genetic Distance = -1 * Ln(Nei Unbiased Identity).
Tip: Choose the Step by Step option to show full calculation steps and additional formulas.
No. Samples 20
No. Pops 4
No. Samples 20
No. Pops 4
No. Regions 1
No. Samples 20
No. Pops 4