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CANCER
CATCHERS
Creating new
diagnostic
tools to detect
diseases earlier
MATTERS OF
THE HEART
Uniting to fight
cardiovascular
disease
BETTER
BATTERIES
Encased sulfur
key to lithium-ion
capacity
DIABETES
RESEARCH
MADE
EASIER
Pancreatic
stem cell
supply secured
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CONTENTS | F E AT U R E S | RESEARCH HIGHLIGHTS | I M AG E H I G H L I G H T
EDITORIAL
3 Notes from the editors
F E AT U R E S &
I N N O VAT I O N S
4 Attracting the best to fight
heart failure
RESEARCH
HIGHLIGHTS
12 Chromosomes find
the perfect match
RESEARCH
4 F E AT U R E S &
I N N O VAT I O N S
HIGHLIGHTS
17 What makes brains grow smooth
and small?
RESEARCH
HIGHLIGHTS
25 A protein to make sperm
26 Polymers are tough on
microbes, soft on skin
51 44
52 Getting a functional protein
from A to B
NOTES
FROM THE EDITORS
Editorial board member, Florent Ginhoux, introduces
the latest issue of A*STAR Research
W
elcome to the first edition of four serotypes of dengue (page 18) — both Issue 9 | October - December 2017
A*STAR RESEARCH
Diagnostics Development (DxD) Hub — a occasionally offer protection against certain MATTERS OF
THE HEART
Uniting to fight
cardiovascular
nationally funded program led by ETPL, diseases, such as glaucoma (page 14).
disease
BETTER
BATTERIES
Encased sulfur
key to lithium-ion
DIABETES
ISSUE 9 October - December 2017
RESEARCH
MADE
accelerates the journey of diagnostics devices renewable energy materials are also presented — EASIER
Pancreatic
stem cell
supply secured
from lab to market (page 8). And continuing a novel cathode material for lithium-ion batteries
on from our previous issue’s cover story, which that can potentially increase battery capacity COVER IMAGE
discussed the insidious obesity problem in Asia, severalfold (page 39), and a simple and cost- Diagnostic tests are being
fast-tracked by Singapore’s
our second feature story this issue investigates effective technique for manufacturing solar cells DxD Hub. [page 8]
an important but elusive problem — that of out of non-toxic common materials (page 28).
© Colin Anderson/Photographer’s Choice RF/Getty
heart failure, which affects roughly 26 million And another group of researchers have found
people worldwide (page 4). a way to make tunable magnetic skyrmions
We also showcase exciting developments that could lead to next-generation memory and
in the immunity field, including the computing technologies (page 31).
identification of a new key immune cell subtype There are many more fascinating and ex-
in human blood, ‘pre-DC’, as a precursor of citing stories from A*STAR researchers in this
dendritic cells (page 27), and the discovery issue, I hope you will enjoy the rest of our newly
of a potent antibody that can neutralize all redesigned magazine.
ATTRACTING
THE BEST
TO FIGHT
HEART
FAILURE
A new initiative will investigate the causes of
heart failure in unprecedented detail.
A
n A*STAR-led Hospital and Singapore General
study into heart Hospital. Together, this all-star
failure, the largest cast is throwing the weight of
ever conducted Singapore’s scientific expertise
in Singapore, is and resources at heart disease,
revealing new ways to predict one of the country’s biggest
death or admission to hospital killers, responsible for roughly
for people who have suffered 30 per cent of all deaths.
heart failure, as well as opening “ATTRaCT is the first inte-
potential new avenues to reduce grated platform for translational
the risk of heart failure occurring. cardiovascular research that
It’s all part of the Asian leverages Singapore’s competitive
neTwork for Translational advantages to identify and vali-
Research and Cardiovascular date novel targets in heart disease
Trials (ATTRaCT), a S$30 progression,” says Carolyn Lam, a
million government-backed professor at the Duke-NUS Med-
initiative that for the first time ical School and senior consultant
has brought together leading cardiologist at the National Heart
cardiologists and heart disease Centre Singapore, who is leading
researchers from A*STAR, the the program.
National University of Singapore Launched in 2015, ATTRaCT
(NUS), the Duke-NUS Medical builds on previous Singapore-
© Matthias Tunger/ Getty images
School and two national heart led initiatives such as the Asian
institutions (National University Sudden Cardiac Death in Heart
Heart Centre and National Failure (ASIAN-HF) registry, an
Heart Centre Singapore). Also 11-nation study of more than
involved are Singapore’s Khoo 6,000 heart failure patients.
Teck Puat Hospital, Tan Tock However, ATTRaCT goes much
Seng Hospital, Changi General further, using advanced cardiac
imaging, genetic and molecular that leaders of the A*STAR Bioin- differences in the two distinct
studies to look at the root causes formatics Institute were enlisted forms of heart failure, each of
of heart diseases in patients and to help with its management and which is defined by the amount
animal models. analysis. Those clinical findings of blood pumped out of the heart
were then fed into the program’s with each beat.
HE A RT O F T HE M ATTER more basic discovery efforts. For about half of patients with
The linchpin of the program is The goal, says Lam, is to bet- heart failure, blood volume is
a nationwide prospective study ter understand the mechanisms reduced, causing what is known as
involving Singaporeans with heart underlying disease progression heart failure with reduced ejection
failure and healthy controls. Over so researchers can identify fraction, or HFrEF, a problem that
The study three years, each of the trial’s molecular pathways that can be can be treated with drugs that help
is the first 1,200 participants will undergo a targeted to prevent heart failure. maintain fluid balance in the body.
battery of sophisticated diagnostic The ATTRaCT investigators also The other half maintain what
large-scale tests. These include magnetic hope to develop new imaging seems like normal blood volumes,
trial in Asia resonance imaging to view the modalities or blood-based tests but the heart muscle thickens and
that seeks heart’s anatomy and the health of for detecting early signs of becomes stiff, limiting its capacity
its tissues. Blood samples are also pre-symptomatic disease, as well to meet the body’s needs. This
to unravel examined for novel molecular as reveal the genetic factors re- is known as heart failure with
differences in and immunologic indicators sponsible for predisposing people preserved ejection fraction, or
the two dis- of disease. Also, geneticists to heart issues. HFpEF, and it has no effective
are decoding the full genome remedies — in part because so
tinct forms of sequence of each individual. AN UNMET MEDICAL NEED little is known about what drives
heart failure. The clinical part of the study is The study is the first large-scale this muscle thickening and why,
yielding a wealth of data, so much trial in Asia that seeks to unravel for instance, women are more
CARDIOVASCULAR FAILURE
© Centre Jean Perrin, ISM/Science Photo Library
HEALING HEARTS FOR predisposed to HFpEF than men. women with HFpEF, potentially
THE FIRST TIME “Fundamentally,” says Roger Foo shedding light on the female
Drugs blocking Singheart
RNA molecules in heart
of the A*STAR Genome Institute predisposition to the disease.
tissue (labelled in red of Singapore, “we still need to Notably, the discovery of a
fluorescent dyes below) understand what the biology of molecule in the blood of patients
may help heal heart failure,
rather than merely slowing
that disease is.” with HFpEF, known to be the
progression. The team led Foo is one of ATTRaCT’s target of a drug that’s already
by Professor Roger Foo note leaders, in charge of all research widely used for other types
that blocking the RNA helps
promote heart repair and
related to genetics and epigenet- of diseases, suggests that the
regeneration in mice. ics. Other leaders include Patrick same drug could conceivably be
Cozzone, executive director of repurposed to help deal with the
the A*STAR Singapore Bioim- unique pathology of HFpEF.
aging Consortium, who runs the Foo and his colleagues also
imaging track of the study, and recently identified an RNA
Mark Richards, a cardiologist who molecule (pictured left, in
directs the NUS Cardiovascular red) involved in regulating the
Research Institute and is heading heart’s response to stress. This
efforts to discover blood biomark- molecule, they reported in the
ers of disease. The ATTRaCT journal Nature Communications,
© SCHMaster/ Getty images
Singheart RNA
molecules (red)
Glasgow’s Institute of Cardio- question is: can we heal the heart
helped promote vascular and Medical Sciences and cause recovery and reverse
heart repair in Scotland, who serves on disease in patients?”
the external scientific review By mid-2019, when
committee for ATTRaCT. “I’ve ATTRaCT has run its course,
reviewed initiatives like this in Lam hopes the platform will
other countries, but this one is transform from an observational
special, helped by charismatic, one for target discovery, to an
strong and focused leadership, interventional one for precision
and sympathetic and supportive trials in heart disease. At that
government oversight.” point, novel and repurposed
drugs discovered in the first phase
INITIA L F IND ING S of the program should be ready
ATTRaCT is only just past for clinical testing in patients. “To
the halfway mark, but has already achieve this,” she says, “continued
spurred a number of seminal strong partnership among the
discoveries. For example, the clinical and research institutions,
study investigators have filed to as well as between academia and
patent a new imaging technique industry, are essential.”
that can track metabolism in the
heart muscle like never before. 1. See, K., Tan, W.L.W., Lim, E.H.,
Tiang, Z., Lee, L.T., et al. Single
They’ve also pinpointed cardiomyocyte nuclear transcrip-
a molecule circulating in the tomes reveal a lincRNA-regulated
de-differentiation and cell cycle
bloodstream of patients that stress-response in vivo. Nature
predicts outcomes specifically in Communications 8, 225 (2017)
DIAGNOSTIC
TOOLS
IN THE FAST
LANE
Diagnostics tests are the key to the early
detection and treatment of diseases — and
Singapore’s Diagnostics Development (DxD) Hub
is accelerating the rate at which devices make it
from the lab to market.
C
ancer could become Singaporean government’s
a chronic condition Innovation Cluster Programme,
rather than a and its work covers a number
terminal sentence of key areas: to make sure that
with the right researchers with intellectual
diagnostic tools, says Sidney Yee, property (IP) connect with the
CEO of the almost 4-year-old right business partners; to test
Diagnostics Development (DxD) their findings to make sure
Hub, a national initiative led by they are clinically reproducible;
A*STAR’s commercialization to design application devices
arm, ETPL. “I strongly believe that meet regulatory standards;
the key to managing oncology is to look for pain points in the
early detection. And, if we can adoption of a diagnostics
make minimally invasive or non- tool; and, to mine data from
invasive tests, it’s convenient, Singaporean research spanning
which means people can test the last two decades for insights
more frequently if they have a that could be turned into useful
high-risk profile.” Sometimes, diagnostic tests. “We don’t do
however, research that could any of the research,” says Yee. With the right kind
make this possible isn’t making it “Instead we develop already of diagnostics tests,
© Dana Neely/Getty Images
technological know-how, there ASIAN RESEARCH COMING everything is coming together its ideas for diagnostic tools,
is little awareness of how to turn OF AGE AND READY FOR at a time when it’s not just such as the gastric cancer test
that technology into a product. TRANSLATION information we need, but also (see left box) or staging and
“DxD is a high-throughput engine With the acceleration of actionable information,” she says. differentiating liver fibrosis for
to help startups and researchers genomics and technology, Asian Fortunately, Singapore has been better treatment outcomes, in
develop diagnostic tests. Those research as a whole is turning its investing in biomedical research pre-existing A*STAR research.
startups may then later translate attention to translation says Yee. and engineering for many years. “We don’t do discovery of
IP on their own or they can There is currently a market of It will serve them well as clinical any genetic biomarkers or
continue to work with us. So, the 700 million people or more solutions customized for Asian protein biomarkers, instead
DxD Hub will have a multiplier populations become much more our job is to mine what has
effect too.” Yee notes that it is
often not appreciated that IP
“We’re also important to markets. “We were
always developing healthcare
already been done in the
ecosystem,” Yee says.
translation is an industrialized getting more solutions for a global population, The hub also hopes to curate
process that produces regulated information but not really paying attention existing data so that artificial
diagnostics solutions, and to the differences in the different intelligence (AI) is better able to
requires the careful integration on how populations. Now we need deliver personal and multimodal
of biology, engineering and the Asian to look at solutions for Asian healthcare solutions – a process
technology platforms. The hope populations more specifically.” that Yee calls “digital diagnostics”.
is to educate and train people on
phenotype is The idea of personalized “To do digital diagnostics,
how to translate research into unique and medicine like this is not new, we need a lot of correlated and
Opposite: © Ullstein Bild/Getty Images
new commercial products in different...” says Yee, but it’s only now curated data. It would take us
companies all over Singapore, possible because technologies years to gather the data if we
she says. in Asia who are starting to like deep learning are converging started from zero. So, we’re
While the DxD Hub is led by spend as much, if not more, with genomics. looking back at what we’ve
A*STAR’s ETPL, it is a nationally per head on medicine as their The DxD Hub is very already done.” Over the last few
funded program and many of its western counterparts. “We’re well placed geographically decades, Yee says, Singapore
projects also come from external also getting more information to use existing Asian data to has invested heavily in medical
parties. Oncology diagnostics is on how the Asian phenotype look for these solutions and research. “Now is the time to
currently its biggest portfolio, is unique and different, and so has already found some of harvest tangible results.”
followed by cardiovascular and
infectious diseases, metabolic
diseases and neurological
disorders. Currently, the
hub is actively working on
25 diagnostic projects.
Opposite: © Courtesy ETPL
of approximately 90 to 95 per
cent. That’s roughly the same as
commercial industry, Yee says. Of
these 400, they will identify 150 Many researchers
are looking into
that have the evidence to answer
liquid biopsies,
specific diagnostic questions, which detect
which will then be examined DNA and RNA
fragments in the
from a business development
blood. These can
standpoint. At any one time, DxD be used to more
Hub will be in discussions with easily diagnose
cancers.
potential business partners on 40
to 50 of the projects.
A*STAR researchers
discover a protein
duo that helps
chromosomes in
reproductive cells
find each other.
© xxxxxxxxxxxxxx
dock to each other to ensure motor which shuffles along biology textbook!”
that the DNA is correctly the microtubule scaffolding of
distributed to the sperm the cell. Mice modified to lack 1. Lee, C.-Y., Horn, H. F., Stewart, C. L.,
Burke, B., Bolcun-Filas, E. et al.
or egg: a bad chromosome KASH5 were infertile.
Mechanism and regulation of
match can render the entire The scientists proposed
rapid telomere prophase
cell non-functional. Even that KASH5 docks to the movements in mouse meiotic
worse, failure to distribute surface of the nucleus and chromosomes. Cell Reports 11,
chromosomes correctly teams up with another protein 551-563 (2015).
EYES OPEN TO associated with XFS1. the p.407F allele, located at the
LOXL1 gene.
A PROTECTIVE ‘‘This mutation
“This mutation has never
FAST FLOW
TO SAFETY
CYBER
FORENSICS A new data structure developed
at A*STAR allows rapid tracking
and policing of data flowing in
and out of a network.
data that is robust against becoming inefficient as the REX stands for Resilient and environments,” says Thing.
cyber-attacks and allows it to be internet grows and data flows Efficient data Structure (X for
processed in record time. get larger. Researchers have structure)” says Thing. Jokingly, 1. Divakaran, D. M., Ko, L. L., Su, L. &
Thing, V. L. L. REX: Resilient and
The team’s work improves developed data structures known Thing explained that this data efficient data structure for tracking
on widely-used data structures as Cuckoo and Peacock, but structure was named REX network flows. Computer Networks
called ‘hash tables’. “A hash table when they are under attack, (after Tyrannosaurus Rex) to 118, 37–53 (2017).
A HAIR-RAISING
IMAGE
To investigate the role of cellular
senescence in age-related hair
depigmentation, the loss of lamin
B1 is employed as a biomarker to
detect senescent cells in hair follicles.
Immunofluorescent image of a human
© 2017 A*STAR Institute of Medical Biology
HUMAN
GENETICS
WHAT MAKES
BRAINS GROW
SMOOTH AND
SMALL?
Researchers uncover how
a microtubule-related gene
affects neural development.
The mechanism linking mechanism linking P80 to as a motor to shuffle between that P80 and NuMA activity in
cortical developmental disorders these symptoms2. the nucleus and the centrosome, the centrosome is essential for
with a gene related to key The study began with a a microtubule organizing neural development. In mouse
structural components of cells search for proteins that interact center that plays a crucial embryos, neurons lacking
known as microtubules has with P80. To the researchers’ role in mitosis. The lack of either protein differentiated
been uncovered by A*STAR surprise, they discovered an either protein led to abnormal early, divided insufficiently, and
scientists. The discovery interaction with NuMA, a mitosis. Mutations in P80 migrated abnormally.
improves our understanding of well-studied protein which linked with microlissencephaly “With each gene causing a
the pathology of the disorders organizes microtubules impaired its interaction with similar phenotype, we are adding
and expands the range of during mitosis. They also dynein or with microtubules, more pieces to the puzzle. By
genes known to be involved confirmed that P80 binds to suggesting that the P80-NuMA- connecting the dots we will
in neurodevelopment. dynein, a molecular motor dynein network plays a role in eventually get the big picture of
Microcephaly and associated with microtubules these disorders. how a human brain is built,” says
lissencephaly are disorders in that had already been identified “The most elegant assay Reversade. In the meantime, each
which brains develop to be as a P80 partner. we did was the in vitro aster gene they identify improves the
abnormally small or abnormally formation,” says Oz Pomp, a prospects of genetic counseling
smooth, respectively. In 2014, ‘‘With each gene scientist in the Reversade lab who and screening and provides a new
Bruno Reversade’s team at the co-led this project. Asters are avenue for researchers studying
causing a similar
A*STAR Institute of Medical microtubule arrays formed during brain disorders.
phenotype, we
Biology and Chris Walsh’s mitosis around the centrosome,
lab at Harvard showed that
are adding more an organelle which forms 1. Hu, W. F., Pomp, O., Ben-Omran, T.,
© SCIEPRO/Science Photo Library/Getty
patients with both disorders pieces to the microtubules and regulates the Kodani, A., Henke, K. et al. Katanin
Transparent flexible
electronics based
on 2D materials.
MATERIALS
PRODUCING
TOP-NOTCH
2D MATERIALS
Mass producing
ultrathin nanosheets
could lead to next-
generation electronic and
optoelectronic devices.
particular, MoO3 emerged as an nanosheets, the parent crystal After cooling the crystals trioxidenanosheets with larger
important 2D semiconducting must be of very high purity.” to room temperature, the team areas, as well as exploring their
material because of its By first using a technique used mechanical and aqueous potential use in other devices,
remarkable electronic and optical called thermal vapor transport, exfoliation to produce submicron- such as gas sensors,” says Liu.
properties that hold promise for the researchers evaporated thick belts of MoO3 crystals.
a range of new applications in MoO3 powder in a tube- Once they subjected the belts to 1. Liu, H., Cai, Y., Han, M., Guo, S., Lin,
M. et al. Aqueous and mechanical
electronics, optoelectronics and furnace at 1,000 degrees sonication and centrifugation, exfoliation, unique properties and
electrochromics. Celsuis. Then, by reducing the they were able to produce large, theoretical understanding of MoO3
Liu Hongfei and colleagues number of nucleation sites, high-quality MoO3 nanosheets. nanosheets from free standing
from the A*STAR Institute they could better match the The work has provided a-MoO3 crystals: Raman mode
softening and absorption edge blue
of Materials Research and thermodynamic crystallization new insights into the interlayer shift. Nano Research advance online
Engineering and Institute of of MoO3, to produce high- electronic interactions of 2D publication, 10 August 2017 (doi:
High Performance Computing quality crystals at 600 degrees MoO3 nanosheets. The crystal 10.1007/s12274-017-1733-x).
Dad’s weight
contributes to a
child’s risk of obesity.
© xxxxxxxxxxxxxx
THERAPEUTICS
MAKING HIV
DRUGS WORK
LONGER
Computational
modeling of drug Computational mod-
eling suggests that
resistance could a HIV drug called
lopinavir (pictured)
help guide treatment should be used
decisions for people before others of the
same type to avoid
infected with HIV. cross-resistance.
A bioinformatic examination The team modeled the protease inhibitor would probably should try one of the four
of HIV mutations could structures of more than induce resistance to lopinavir other protease inhibitors that
help guide the selection of two dozen mutated proteases as well. That means it’s not are prone to cross-resistance,
antiretroviral therapies in that clinicians found made very useful if taken by patients while saving the two that are
such a way that the onset HIV resistant to any one of after other drugs have started to least affected by cross-resistance
of drug resistance could be seven different protease-blocking fail. However, since resistance as agents of last-resort.
delayed. This would “prolong drugs. These mutations arose to lopinavir does not seem Clinical implementation
drug effectiveness, improve in patients who were taking to affect how well the other of these recommendations
quality of life and lower just one of these drugs, but six protease inhibitors will will be needed to test the
treatment costs,” says Samuel they impacted the efficacy of work, Gan and Su conclude predictions of the computational
Ken-En Gan, from the A*STAR other protease inhibitors, too. that lopinavir should be modeling. But as Gan notes,
Bioinformatics Institute. The A*STAR team showed that considered as the drug of choice the insights gleaned from
Through structural modeling cross-resistance can develop for patients who are getting their his group’s structural analysis
and computational analyses, Gan easily across five of the seven first protease inhibitor. would be hard to come
and his team have shown how protease inhibitors, but less so for by any other way. “This paper,”
changes in the HIV genome that the other two. he says, “represents a landmark
make the virus resistant to one That kind of information, ‘‘These drugs analysis using bioinformatics
© LAGUNA DESIGN/Science Photo Library/Getty
antiretroviral drug can often says Chinh Tran-To Su, impacted the to go where experimental
induce resistance more broadly a postdoctoral fellow in labs and clinical trials cannot
efficacy of
to other drugs of the same class. Gan’s lab, “could help guide easily investigate.”
other protease
The findings suggest that some of the selection of drugs for the
these drugs should be prescribed first and subsequent lines
inhibitors, too.’’ 1. Su, C. T., Ling, W. L., Lua, W. H.,
Haw, Y. X. & Gan, S. K. Structural
before others. This includes of treatment.” analyses of 2015-updated
drugs that block critical viral Take the protease drug-resistant mutations in
proteases — enzymes that break inhibitor lopinavir, for Should resistance then HIV-1 protease: an implication
of protease inhibitor cross-
down proteins — called protease example. The analysis found emerge to lopinavir, the resistance. BMC Bioinformatics 17,
inhibitors. that resistance to any other analysis indicates that patients 500 (2016).
BUILDING A
BARRIER AGAINST
TWO-
DIMENSIONAL OXIDATION
MATERIALS
Chemically stabilizing atomically
flat materials improves their
potential for commercial application.
Two-dimensional materials have created single layers of other Computing used first-principles in air is the absorption of
could underpin a novel family materials — tin, germanium, calculations to demonstrate oxygen. The fast oxidation of
of flexible, low-power electronic boron, silicon and phosphorus that placing phosphorene on a freestanding phosphorene in
devices, but their success — with their own signature molybdenum diselenide substrate ambient conditions is due to a
depends on ensuring the layers properties. For example, while and applying a vertical electric low energy barrier for oxygen
are chemically stable. A*STAR graphene is a semi-metal without field can drastically increase its absorption of about 0.57
researchers now show that one a band gap, phosphorene is a resistance to oxidation. electronvolts: oxidation can
2D material, phosphorene, can be semiconductor like silicon, which “The interaction and charge occur in less than a minute.
stabilized with the right choice of makes it useful for electronic transfer between substrate and When this analysis is repeated
substrate and an electric field. devices. However, phosphorene phosphorene can be tuned with phosphorene overlying
Graphene, a single layer has a notorious drawback: the by an external electric field, molybdenum diselenide, the
of carbon atoms, deserves its material oxidizes in air and its causing a change in surface activity energy barrier is much higher.
reputation as a supermaterial; quality is rapidly degraded. and suppressing the oxidation of The model also shows that the
it’s strong, hard, light, and has In search of a viable approach phosphorene,” explains Gao. presence of the molybdenum
excellent electronic and thermal to overcome this, Junfeng Gao Their study shows that the diselenide substrate enables more
properties. It is the archetypal 2D and colleagues from the A*STAR dominant process involved in effective tuning of the properties
material. More recently scientists Institute of High Performance the degradation of phosphorene of the phosphorene with an
electric field. This increases
the oxidation energy barrier
even further. Under a suitable
vertical electric field, the
barrier can increase to 0.91
electronvolts. This lifetime
of the phosphorene against
oxidation can be 105 times greater
than that without treatment.
Gao’s approach
to achieve air-stable
phosphorene may greatly
promote its use in practical
© 2017 A*STAR Institute of High Performance Computing
An A*STAR team
have developed a
system that looks
for general patterns
associated with
suspicious activities
in network traffic,
in order to defend
against a wide
variety of threats.
The team tested their new “Infertility is generally of Molecular and Cell “The next step is to figure
evidence-gathering system on perceived to be mostly a female Biology and collaborators out all of the functions of Emi2
recorded internet traffic, and problem, but this is wrong,” elsewhere in Singapore and in making sperm,” says Kaldis.
found it could quickly identify says Philipp Kaldis, researcher in Taiwan, the USA and The work so far suggests that
many notorious botnets such from A*STAR. Kaldis studies Europe1. They say this indicates it is essential, but has not fully
as Andromeda, Zeus and Sality, the development of human that the protein may play revealed why.
with very few false positives. sperm, his work could one a similar role in humans. There are hints,
Given this success, Thing is day lead to the treatment The researchers were able to however, from the protein’s
hopeful that by improving of male infertility and help identify the crucial role for known role in the ovary.
their detection patterns, their develop chemical contraception Emi2 in testes by creating There, it regulates meiosis, an
system could defend networks methods for males. mice in which the gene that essential cellular process for
against a much wider variety To set his work in context, codes for the protein was halving chromosome numbers
of attacks than has previously Kaldis points to studies knocked out. The mice were left to make egg and sperm cells that
been possible. reporting a 50-60 per cent sterile, but suffered no other will combine to form a fertilized
“If we can detect malware fall in sperm counts between major effects. egg cell.
infections by analyzing net- 1973 and 2011. “Claims that “Nobody had previously Any applications of
work traffic, we can prevent this trend could lead to the studied the role of this the research to devise
malware from further spread- extinction of the human protein in testes,” says treatments for male infertility,
ing,” she says. “We could also race may be exaggerated,” he Kaldis, noting that the or contraceptives, would
trigger the disconnection concedes, but they do indicate protein has been shown to be require much further
of infected hosts, thereby a need for understanding involved in controlling the research, but Kaldis’ work
curbing the rampant growth male fertility. cell divisions that produce lays the foundations for major
of botnets.” The importance of a egg cells in ovaries, but that medical advances.
protein called Emi2 for its activity has not been
1. Divakaran, D. M., Fok, K. W., generating sperm in mice has detected in other tissues. 1. Gopinathan, L., Szmyd, R., Low, D.,
Nevat, I. & Thing, V. L. L. Diril, M. K., Chang, H-Y. et al.
now been shown by Kaldis, This all suggests that it
Evidence gathering for network Emi2 is essential for mouse
security and forensics. Digital working with colleagues is an important player in spermatogenesis. Cell Reports 20,
Investigation 20, S56–S65 (2017). at the A*STAR Institute human reproduction. 697–708 (2017).
POLYMERS ARE
TOUGH ON MICROBES,
ANTIMICROBIALS SOFT ON SKIN
Polymers that kill germs rapidly
and effectively will help in the fight
against multidrug-resistant microbes.
Inexpensive antimicrobial drug-resistant microbes. The polymers with optimized scrubs, hand washes and
polymers that are gentle on the The antimicrobial compounds structures killed almost 100 disinfectants,” she adds.
skin and highly effective in killing of the body’s immune system use per cent of microbes within The polymers have two
microbes have been developed by a different tactic — they fight two minutes. They were also key components: positive
A*STAR researchers1. They have microbes by destroying their softer on the skin of mice than charges and hydrophobic
promise for use in surgical scrubs membranes. Since this approach commercial surgical scrubs parts. Their positively charged
and disinfectants. is based on the inherent electrical that are currently used in components interact with the
Most antibiotics work properties of the cell membrane, it clinical settings. negatively charged membranes
by disrupting the specific is much harder, if not impossible, “Our polymers kill a broad of pathogenic microbes, while
biochemical pathways microbes for microbes to develop resistance. spectrum of microbes, especially the hydrophobic parts of the
use to make the proteins and Now, Yi Yan Yang the difficult-to-kill Pseudomonas polymers enter the two layers
enzymes which are essential for of the A*STAR Institute aeruginosa, faster than any of of fat cells inside membranes.
their survival. This strategy makes of Bioengineering and the many antimicrobial peptides This double action ruptures
them lethal to microbes but safe Nanotechnology and her and polymers reported to the membrane and destroys
to the cells of humans and other co-workers, in collaboration date,” comments Yang. “With the microbe. Since the surfaces
mammals. However, it is easy for with IBM Almaden Research their superfast bactericidal of mammalian cells are less
microbes to develop resistance to Center, have developed powerful effect and skin compatibility, negatively charged than those
such antibiotics, which has led to antimicrobial polymers that these polymers are promising of microbes, cells such as red
the widespread problem of multi employ the same strategy. candidates for use as surgical blood cells are immune to the
polymers’ action.
The researchers found that
repeated use of the polymer at
sub-lethal doses did not lead to
bacterial resistance. In addition,
the polymers are inexpensive
to make and can be synthesized
from commercially available
starting materials.
“Building on this work, we are
developing biodegradable versions
of the polymers,” says Yang. “They
are designed to degrade into
benign, environmentally-friendly
compounds. Such biodegradable
© MARK THOMAS/SCIENCE PHOTO LIBRARY
Electronic
microscopy
images of pre-
DCs (top) and
IMMUNE pDCs (bottom).
SYSTEM
2µm 2µm
UNRAVELING
THE COMPLEXITY
Powerful new technologies
shed light on the origin and
maturation process of key
immune system cells.
2µm 2µm
The accuracy of previous from the A*STAR Singapore rely on prior knowledge, to with pDCs, but that are
immunology studies has been Immunology Network, who re-examine the classification functionally distinct as they are
called into question by the led the international team and interrelationship of able to mature into cDC1 and
discovery of an additional cell of researchers. dendritic cells. cDC2 cell types but not pDCs.
subtype. The comprehensive There are two main “We were amazed to find this
analysis of the maturation types of dendritic cells: cluster of cells with unique
process of the immune system’s plasmacytoid DCs (pDCs)
‘‘We were properties that lie between
dendritic cells could lead to new (see image), which promote
amazed to find those of pre-DCs and pDCs”
potential targets for more antiviral immune responses this cluster of says Ginhoux.
effective immunotherapy through the production of cells with unique These findings bring
treatments and vaccines. interferons, and conventional properties into question results from
Pathogens such as DCs (cDCs). The latter between those many studies that have relied
bacteria and viruses trigger come in two flavors or subsets: of dendritic cell on a small set of markers
an immediate, nonspecific cDC-1 and cDC-2 and have precursors and to isolate pDCs. “It is likely
immune response. Dendritic crucial roles in mounting plasmacytoid that such studies were
cells are immune system cells immune responses to dendritic cells.’’ contaminated with pre-DCs”
that ‘decide’ whether to mount intracellular and extracellular Ginhoux explains.
a longer, specific and more pathogens, respectively. Further analyses confirmed
complex immune response that However, little is known They applied two powerful previous findings in mice
will protect against subsequent about the origin of dendritic cells technologies: single-cell RNA that the pre-DC population
© 2017 A*STAR Singapore Immunology Network
re-infection with the same and the mechanisms through sequencing and cytometry by can be split into pre-cDC1
pathogen. “Characterizing which they become specialized time-of-flight to a fraction of and pre-cDC2 lineages as the
the immune system’s key to carry out these functions. human blood cells containing precursors start to commit to a
decision-making cells is crucial Until now, dendritic cells dendritic cells and dendritic particular lineage.
to improve the efficacy of have been identified and cell precursors (pre-DCs) (see
vaccines and develop better characterized based on the image), and analyzed the entire 1. See, P., Dutertre, C. A., Chen, J.,
Günther, P., McGovern, N. et al.
therapeutics for devastating expression of particular proteins gene expression and protein
Mapping the human DC lineage
autoimmune diseases such as or surface markers. Ginhoux profile of these cells. through the integration of
multiple sclerosis or lupus” and colleagues took a different They identified pre-DCs high-dimensional techniques.
explains Florent Ginhoux, approach, which does not that share surface markers Science 356, eaag3009 (2017).
compound, which offers the but require high-quality, et al. Impact of molybdenum out
optical and electrical properties thin films of CZTS with no diffusion and interface quality on
the performance of sputter grown
required in solar cells, but is impurities, and a suitable CZTS based solar cells. Scientific
made from non-toxic, widely material for the ‘buffer’ Reports 7, 1350 (2017).
A*STAR researchers
develop a technique
that could lead to
significantly cheaper
and better perform-
ing solar cells
© xxxxxxxxxxxxxx
Researchers advise
that pregnant
women should try
to avoid eating too
OBESITY much sugar.
HEAVY LEGACY
OF MUM’S
SWEET TOOTH
The babies of women who
consume carbohydrate-rich
foods during pregnancy have
an altered growth-trajectory.
Babies born to women when they were 26–28 weeks The team found that is a lack of research,” says
who have a sugary diet pregnant about their diet during a woman’s carbohydrate Chen. “It’s also important,
during pregnancy have a that period. intake, particularly the because Asians tend to
higher body mass index, amount of sugar she consumed, have higher risk for diseases
according to a new study by during pregnancy, was such as cardiovascular disease,
Singaporean researchers. ‘‘One of associated with more rapid even at the same BMI.”
Childhood obesity the novelties weight gain and a higher peak Given that high sugar
has steadily increased in of this study is BMI during infancy — even intake during pregnancy
recent decades, and is that it is though it didn’t significantly is already known to
associated with a higher risk performed affect the babies’ birth associate with excessive
of cardiovascular disease on an Asian weight. A high carbohydrate pregnancy weight gain and
and type 2 diabetes in intake was also associated higher risk of gestational
population,
later life. Although there’s with a higher BMI diabetes, Chen says it
where there is
some evidence that gaining when the children were assessed may be prudent for pregnant
substantial amounts of
a lack of at 2, 3 and 4 years of age, women to avoid foods and
weight during pregnancy research.’’ suggesting the effect may beverages high in sugar.
can increase the child’s be long-lasting — although The World Health Organization
obesity risk, little is known Once their babies were follow-up studies are recommends getting no
about how the specific foods born, they were weighed at needed to confirm this. The more than ten per cent of
a woman eats affect her regular intervals to track children in the study are total daily energy intake from
baby’s weight. their growth. The childhood now seven, and continue to free sugars.
© JGI/Jamie Grill/Blend Images/Getty
AUTOIMMUNITY
LUPUS LINK TO
STIMULATORY
PROTEINS Monocytes (pictured), or
white blood cells, play an
essential role in protecting
Lupus patients exhibit us from pathogens, but
altered cell proteins, can also overexpress
excitatory proteins
a discovery with associated with systemic
lupus. It’s yet to be seen
potential implications for whether this overexpres-
diagnostics and studies sion contributes to the
disease, or just indicates
into the disease’s origins. its presence.
Autoimmune diseases such and Cell Biology, recently responses upon recognizing showed no disparity in SLE
as lupus — in which the body discovered a link between SLE the body’s own molecules. disease severity/prevalence
attacks its own cells and tissues and the increased prevalence This is thought to be an innate between those with, or without,
— are on the rise, according to of a cell-surface protein that mechanism that prevents the the gene variant.
A*STAR’s Anna-Marie Fairhurst. modulates immune responses, body from attacking itself. This paper is the first
Her team is the first to observe called ‘Siglec-14.’ Siglec-14, however, differs in to explore the relationship
that patients with lupus exhibit that it’s an excitatory molecule between SLE and monocyte
an increased number of a specific that stimulates host defenses. Siglec expression, and Fairhurst
type of protein on the surface of ‘‘Every discovery “An increased expression hopes that other institutions
certain white blood cells. This in research is a of Siglec-14 would create a will start to look at the
finding may help diagnosticians stepping stone.’’ greater stimulatory signal,” relevance of Siglec proteins to
in detecting the disease, or reveal says Fairhurst. It’s not fully disease: “Every discovery in
new avenues of research into understood how much the research is a stepping stone, and
its causes. The team assessed increased protein contributes to since this study is the first of its
“Systemic lupus 39 patients with SLE and the disease: “The increase could kind, I’d like other researchers
erythematosus, or SLE, is the found that, compared to a either amplify inflammation or to be able to reproduce these
© ROGER HARRIS/SCIENCE PHOTO LIBRARY/Getty
archetypal autoimmune disease, cohort of healthy individuals, just be an indicator of disease,” results, and then build on
and affects the whole body,” says the patient group expressed says Fairhurst. them to find out why this
Fairhurst. Common symptoms significantly more Siglec-14 In a previous study happens, and better understand
include fever, swollen joints, proteins on a class of white blood into Siglec-14 and chronic human disease.”
and fatigue, though the exact cells, called monocytes. SLE obstructive pulmonary
presentation and severity vary disease severity also increased disease, a gene variation causing 1. Thornhill, S. I., Mak, A., Lee, B.,
Lee, H. Y., Poidinger, M. et al.
from patient to patient. in tandem with the monocyte the loss of Siglec-14 expression Monocyte Siglec-14 expression
Fairhurst’s research group, levels of Siglec-14 among the resulted in a reduced risk of is upregulated in patients with
including scientists from the study group. inflammatory response that systemic lupus erythematosus
and correlates with lupus disease
Singapore Immunology Network Most Siglec proteins are could exacerbate the disease. activity. Rheumatology 56,
and the Institute of Molecular inhibitory, dampening immune Fairhurst’s results on SLE 1025–1030 (2017).
An electron
microscopy image
of the KNN thin
film showing
PIEZOELECTRICS the controlled
formation of the
crystalline domains
responsible for the
piezoelectric effect.
LEAVING LEAD
BEHIND
Thin films of a lead-
free piezoelectric
finally match the
performance of the 1µm
lead-bearing standard.
An advance in fabrication applications. However, PZT Now, Kui Yao and colleagues The interactions between the
technology greatly improves contains 60 per cent lead — a from the A*STAR Institute volatile alkali ions in solution
the material quality and toxic metal, which although once of Materials Research and and the stabilizing agent
performance of thin films commonly used in electronics, Engineering, in collaboration with suppressed volatilization,
of a lead-free ‘piezoelectric’ has been banned. National University of Singapore allowing the compositions
material1. This development by researchers, have shown that a of the resulting films to be
A*STAR researchers promises solution-based fabrication method well controlled.
to unlock a lead-free alternative ‘‘It has been using a painstakingly formulated “With the film composition
to the lead–zircon–titanate challenging cocktail of chemical agents can under control, we were
(PZT) standard. to achieve produce thin films of KNN with able to study the phase
Piezoelectrics are excellent a piezoelectric performance transitions in the material
remarkable materials that piezoelectric comparable to PZT. and their dependence on the
deform on application of an properties in “It has been challenging to chemical composition and stress
electric field and, conversely, KNN-based achieve excellent piezoelectric in the KNN-based thin films,”
produce an electric current thin films.’’ properties in KNN-based says Yao.
when compressed. They are thin films because the phase Through laser measurements
used in many electronics conditions needed for the combined with theoretical
© 2017 A*STAR Institute of Materials Research and Engineering
applications, including as An alternative material, piezoelectric effect depend very analysis from first-principles
electromechanical actuators which is based on a sensitively on composition,” simulations, the team confirmed
and as sensors for strain and potassium–sodium–niobate explains Yao. “In KNN, it has that the performance of their
acceleration. Thin films of composition and is known been difficult to suppress the loss piezoelectric films makes them
piezoelectric materials are as KNN, is being used as of volatile elements needed for a viable lead-free alternative
also being integrated into a replacement for PZT in these conditions.” to PZT.
microelectromechanical systems many bulk applications. Yet thin Yao and his team overcame
(MEMS) circuits and devices. films of KNN are problematic this problem by adding a 1. Wang, Y., Yao, K., Qin, X.,
Mirshekarloo, M. S., Liu, X., Tay, F. E. H.
For decades, PZT was because they are subject to a blend of chemical stabilizing High piezoelectric performance
the piezoelectric material of breakdown of composition agents — refined over more and phase transition in stressed
choice, since it offered the control and the atomic than ten years of research — to lead-free (1–x)(K,Na)(Sb, Nb)
O 3-x (Bi,Na,K)ZrO 3 thin films.
degree of deformation or ordering needed to produce the the precursor solution used to Advanced Electronic Materials 3,
sensitivity needed for practical piezoelectric effect. prepare the KNN thin films. 1700033 (2017).
INVISIBILITY IS
WITHIN SIGHT
PHOTONICS The theoretical discovery of transparent
particles that break the previously accepted
limit of visibility opens a new door in the
search for perfect transparency.
Transparent particles with light that hits them. It has long be suppressed in transparent transparent particles have
extraordinarily high refractive been accepted that all particles particles at wavelengths some degree of scattering. We
indices can become almost undergo Rayleigh scattering, longer than the particle scale have been able to reveal a new
invisible at wavelengths longer and that the minimum amount if their refractive index is phenomenon that could be
than the particle size, an of scattering occurs when the extraordinarily high. used to design ultra-transparent
A*STAR-led theoretical study refractive index — a measure optical materials.”
has shown1. The discovery of the ‘slowness’ of light passing Rayleigh scattering occurs
challenges the accepted wisdom through a medium compared ‘‘This phenomenon when light is absorbed by
around the limits of light with a vacuum — is less than two. could be used a molecule — producing a
scattering and visibility, and Water, air and glass all meet this to design ultra- separation of positive and
could lead to a new class of condition, suggesting that the transparent negative charges known as an
‘invisible’ materials. Rayleigh scattering that makes optical materials.’’ electric dipole — and re-emitted
The scattering of sunlight the sky blue is the least visible by the dipole at the same energy.
from gas molecules in the state physically achievable. This can occur at all wavelengths,
atmosphere is what makes Boris Luk’yanchuk and “There have been many but is more efficient at short
the sky look blue, allowing us colleagues from the A*STAR attempts to reduce scattering,” wavelengths, which is why the sky
to effectively see what would Data Storage Institute, in says Luk’yanchuk. “For is more blue (short wavelength)
otherwise be a transparent collaboration with researchers example, suppression of the than red (long wavelength).
medium. This process, known from the Australian National back reflection of radar signals “In our theoretical study
as Rayleigh scattering, occurs University, have now upset this has been widely studied as part we found that for very high
when molecules or particles are status quo with the discovery of the development of stealth refractive index materials, the
smaller than the wavelength of that Rayleigh scattering can technology. Yet even very small contribution of the electric
dipole becomes vanishingly
small,” explains Luk’yanchuk.
“Specifically, we found that
Rayleigh scattering,
the electric dipole mode
responsible for the
blue hue of the sky, in small particles of such
can be suppressed materials is suppressed by the
in subwavelength emergence of another dipole
particles with
mode, resulting in ultra-weak
extraordinarily high
refractive indices. scattering below the Rayleigh
limit. The challenge now is to
find or develop materials with
a high enough refractive index
© Dave and Les Jacobs/Blend Images/Getty
overindulgence
– sometimes
unfairly.
Altered gene
promoters in gastric
cancer cells (blue)
helps them evade
CANCER detection by cells of
the immune system
(green).
HOW STOMACH
TUMORS HIDE
Alterations in gene
regulation make gastric
cancer cells less visible to
the immune system.
Gastric cancer cells are helped Institute of Singapore, primary wrapped around — to locate the reversible nature of
to evade the immune system by author of the study. “More and identify active gene promoter activity can be
alterations in gene regulation, than half of the genes in the promoters. Comparing exploited to modulate the
according to new work by human body have more than active promoters in gastric immunogenicity of gastric
A*STAR researchers. This one promoter controlling cancer cells with those in cancer tumors and make them
mechanism might apply to them, and cancer cells often healthy gastric cells enabled more sensitive to immunotherapy.”
a wide range of cancers, and exploit this by using abnormal identification of almost 2,000 Furthermore, analysis of
could be exploited to improve promoters to drive malignancy. promoters that are altered in a cancer genetics database
cancer treatments. We wanted to identify which gastric cancer. revealed many similar
Gastric cancer is promoters are abnormally The alterations in promoter alterations in other
among the most common activated or silenced in gastric promoters not only conferred cancers — colon cancer,
and deadly forms of the cancer cells.” cancerous properties, but kidney renal clear cell
disease and has limited treatment also reduced the expression carcinoma and lung cancer
options. The impact of of proteins in tumor cells — suggesting that similar
gastric cancer means that its ‘‘Studying the that would enable the mechanisms apply to many
genetics have been studied tumor promoter immune system to detect cancers. The researchers
extensively. Patrick Tan, from the profiles of them. This mechanism helps now aim to determine the
A*STAR Biomedical Research the cells evade the immune cellular pathways involved
gastric cancer
Council, and an international system, but also reduces the in the function of the
research team, now provide new
patients can effectiveness of immunotherapy, altered promoters. “Targeting
insight by studying variation in
help to identify which exploits the these pathways can
gene promoters, components suitable immune system to attack potentially increase the
of DNA that regulate candidates for the tumor. Ultimately, the response rates of gastric cancer
© SCIEPRO/Science Photo Library/Getty
1 μm 100 nm
Scanning electron microscopy image showing a sheet of the MoS2-wrapped sulfur nanoparticles.
GENETIC
DISEASE
MUTATION
DISCOVERED FOR
JOINT DISORDER
A rare genetic mutation
associated with a
developmental disorder
could be a treatment A nerve cell, with a
target for related protective myelin
sheath indicated
conditions in adults. in yellow.
The discovery of a rare genetic resulted in several fetuses dying for a molecule called LGI4. This in the early stages of pregnancy,
mutation associated with a dev- before birth or soon after. molecule is secreted by Schwann and people with a family history
astating developmental disorder “We knew that it was cells, which produce the fatty of the disease could be offered
called arthrogryposis multiplex probably going to be genetic sheath called myelin that covers genetic counseling before
congenita could also provide because many of these families and insulates nerve cells, and pregnancy. It also opens the
researchers with a new treatment had multiple individuals with enables them to conduct electrical door to research that could help
target for a group of related neu- this condition,” says Shifeng Xue impulses quickly and effectively. adults with degenerative diseases
rodegenerative diseases, including from the A*STAR Institute of It suggests that LGI4 plays a key such as multiple sclerosis, where
multiple sclerosis, in adults. Molecular and Cell Biology. role in the myelination process. the immune system attacks and
Arthrogryposis multiplex LGI4 and Schwann cells destroys myelin.
congenita is a common birth operate in the peripheral nervous “We’re hoping that by
defect, affecting around 1 in ‘‘We’re hoping system — the parts that don’t identifying LGI4 as being
3,000 live births. Babies with we can develop include the brain and spinal cord important for Schwann cell
the disorder have stiff joints and LGI4 as a — which controls movement and development, differentiation and
their limbs become locked into therapeutic sensory function. myelination, we can possibly
awkward positions because of a biologic to This new mutation develop it as a therapeutic
© ROGER HARRIS/SCIENCE PHOTO LIBRARY/Getty
lack of movement in the womb. stimulate stopped the LGI4 gene from biologic to stimulate myelination,”
The disorder can be caused by myelination.’’ functioning altogether, so those says Bruno Reversade, research
crowding in utero — for example affected by it didn’t have any director at the A*STAR Institute
with twin pregnancies — but it myelin on their peripheral of Medical Biology.
also occurs when genetic muta- But when the researchers nerve cells. This caused severe
tions affect the normal develop- looked at the families’ genomes, malformation of their limbs and 1. Xue, S., Maluenda, J., Marguet, F.,
Shboul, M., Quevarec, L. et al. Loss-
ment of muscles and nerves. they couldn’t find any of the also affected the muscles of the of-function mutations in lgi4, a
A study led by researchers known mutations associated diaphragm so their lungs didn’t secreted ligand involved in Schwann
from A*STAR looked at a group with arthrogryposis. develop properly. cell myelination, are responsible for
arthrogryposis multiplex congenital.
of families affected by a severe Instead they discovered a The discovery means the The American Journal of Human
form of arthrogryposis that new mutation in the gene coding mutation could be screened for Genetics 100, 659–665 (2017).
DIABETES
CELLS ON TAP different studies. It also involves
many time-consuming steps.
Growing pancreatic stem cells Researchers at the A*STAR
Institute of Medical Biology
will help research on diabetes. and the Genome Institute of
Singapore have developed a new
method that reduces the number
of steps and ensures a more
A new cell culture procedure glucose from the blood by the cells to explore what goes wrong consistent supply of beta cells, by
developed by A*STAR will body’s cells. Diabetes therefore in beta cells and to develop generating pancreatic stem cells
assist the study of diabetes and results in high blood glucose new ways to control or correct and expanding them.
facilitate better treatments1. “Our levels, which can be fatal if the problems. It has proved “We found a way to propa-
discovery will enable studies not controlled. The levels are difficult and time-consuming, gate pancreatic stem cells, which
of how the pancreas forms and controlled by administering however, to generate suitable are developmentally much closer
why certain cells malfunction in synthetic insulin, but if too much cell lines. Pluripotent stem to the beta cells we need,” says
diabetes,” says Jamie Trott from is given, there is a risk of low cells — those able to develop Trott. The researchers explored
the A*STAR team. blood glucose. These and other into a wide range of mature modifications to the cell culture
Type 1 diabetes occurs risks of diabetes can lead to long- cell types — can be guided conditions in which these stem
when insufficient insulin is term complications, including through stages that mimic cells developed, eventually dis-
released into the bloodstream problems with vision and the embryonic development, leading covering a cocktail of signals that
by the beta cells of the pancreas. circulatory system. to the formation of beta cells. enabled the cells to grow.
Insulin promotes the uptake of Researchers use cultured Unfortunately, this procedure “Seemingly minor differences
in culture conditions turned
out to be the difference between
success and failure,” says Trott.
“It took a while to identify the
importance of these variables
and to control their effects.”
A key feature of the new
procedure is that the pancreatic
stem cells are self-renewing, so
they can be expanded repeatedly
to generate an enormous supply
of beta-like cells, without the
frequent need to go through
the many stages of embryonic
development. This should make
it easier, faster and cheaper to
produce supplies of beta cells for
scientists investigating diabetes.
The researchers plan to
improve their technique and
© 2017 A*STAR Institute of Medical Biology
BRAIN
FUNCTION
FINE-TUNING
EXCITATION
FOR SURVIVAL The fly central
nervous system
A small molecule plays a big showing a subset
of glia in blue. Mir-
role in protecting the nervous 263a protects
these cells from
system’s support cells from neurodegeneration.
excessive stimulation.
Glutamate is the primary in glia, mir-263a, protects flies They found that mir-263a Previous studies have shown
excitatory neurotransmitter from developing a movement depletion triggers glial cell that glia express all the major
of the central nervous system. defect associated with death and that restoring mir- types of glutamate receptors
In excess it causes cells to neurodegeneration. 263a expression in a subset and that they contribute to
become overexcited, which of glia not only promotes cell maintain neuronal function by
contributes to neuron death ‘‘A single survival, but remedies the flies’ clearing extracellular glutamate,
in neurodegenerative disease. impaired climbing. but little is known about the
microRNA
Now, a study of flies led by Mir-263a is a small effects of glutamate on glia
can target a
Sherry Aw, at the A*STAR non-coding RNA molecule themselves. This study shows that
Institute of Molecular and
family of genes (microRNA) that suppresses glia, like neurons, are susceptible
Cell Biology, highlights the with a similar the expression of multiple to glutamate overstimulation, and
importance of also curbing molecular target genes. In the brain of highlights a key role for mir-
glutamate stimulation in glia. function.’’ mir-263a mutant flies, the 263a in fine-tuning the levels of
Glia are generally considered authors detected an increase glutamate receptor expression in
the nervous system’s support Flies lacking the gene in the expression of over glia and thus, their sensitivity to
cells, although important encoding mir-263a were unable 70 genes, including several the neurotransmitter.
contributions to brain to climb up the walls of a encoding for glutamate It will be interesting to
signaling have also recently cylindrical vial when flipped receptors. When the authors determine whether a similar
© 2017 A*STAR Institute of Molecular and Cell Biology
been described. from a horizontal to vertical reduced the expression levels mechanism contributes to
Although glia account position. The climbing defect of these receptors in glia of neurodegenerative diseases
for 90 per cent of the cells in worsened with age, reflecting a flies lacking mir-263a, glia cell in humans and to explore the
the human brain, research on progressive decline in nervous numbers were restored and exciting possibility of developing
the molecular mechanisms system function. The authors the movement defects were microRNA-based therapeutics to
of neurodegenerative disease were surprised when they suppressed. “MicroRNAs can treat them, says Aw.
mainly focus on neurons. In examined the expression pattern be an efficient mode of gene
their article in Cell Reports, of mir-263a as they found that it regulation as a single microRNA 1. Aw, S. S., Lim, I. K. H., Tang, M. X. M.
& Cohen, S. M. A glio-protective role
Aw and colleagues show that is predominantly expressed and can target a family of genes with of mir-263a by tuning sensitivity
a small RNA that regulates functional in glia, rather than a similar molecular function” to glutamate. Cell Reports 19,
glutamate receptor expression in neurons. explains Aw. 1783-1793 (2017).
‘‘Lorem ipsum
dolor sit amet,
consectetur
adipiscing elit.
Lorem ipsum
dolor sit amet,
consectetur
adipiscing elit.’’
© Westend61/Getty
this to 5 million common The properties of surfactants, surfactants, those with more
genetic mutations, referred substances that lower the compact heads and longer tails
to as single nucleotide surface tension of a liquid, can remained in a flat layer, while
polymorphisms (SNPs), for be fine-tuned by tweaking their those with bulkier heads and
each individual. CHEMISTRY molecular structure, according shorter tails began to buckle into
After analyzing this to a recent A*STAR study1. This undulating waves. In general,
extensive database, the method could help researchers the behavior of the surfactant
researchers discovered that the develop better surfactants also depended on the position of
activity of the gene VSTM1, for a variety of applications, chemical groups around its head.
which encodes a protein called from aiding drug delivery, or
SIRL-1, was heavily dependent improving the efficiency of
on a specific SNP. This oil drilling, to boosting the ‘‘Our simulations
mutation, analysis revealed,
lowered SIRL-1 levels on a
SIMULATING cleansing ability of soap.
Surfactants are molecules
provide a guideline
on choosing the
subset of immune cells called SURFACTANTS with split personalities. They types of surfactants
monocytes and increased the typically have a hydrophilic depending on
risk of atopic dermatitis by 30 Small changes to a ‘head’ that attracts water, and a
the specific
per cent. surfactant’s structure hydrophobic ‘tail’ that prefers
applications.’’
SIRL-1 is a molecule oily molecules. Surfactants can
influence its ability
found on the surface of surround tiny oily droplets
monocytes, and other immune to encapsulate oily to form a structure called a The researchers then
cells, and functions to regulate molecules. micelle, which allows the oily continued to increase the
the defense against invading molecules to be dispersed and concentrations of surfactants in
pathogens. It is not currently stable in water. the intermediate layer. Those with
known which molecule, or Freda Lim and colleagues at more compact heads and longer
ligand, naturally docks to the A*STAR Institute of High tails formed bud-like structures
SIRL-1 inside the human Performance Computing have filled with decane, but did not
body, but identifying such a now shown that rearranging the release free micelles. In contrast,
molecule could result in new atoms in a common surfactant those with the bulkier heads and
intervention strategies for can have a big impact on its shorter tails formed buds that
eczema, Rotzschke explains. ability to form micelles. eventually broke free from the
Reprinted with permission from Ref 1. Copyright (2017) American Chemical Society.
“Our Dutch colleagues The team performed surfactant layer (see image).
are very active in the hunt of computer simulations of a “The selection of surfactants
the ligand,” he says. “Topical family of six different alkyl depends on the purpose for
application of this compound benzenesulfonate molecules, which it is used, so there is
through a cream or ointment surfactants that, due to really no ‘best’ surfactant,”
could help suppress rashes their cost-effectiveness and explains Lim. “Our simulations
and other symptoms.” biodegradability, are widely used provide a guideline on choosing
His own team is casting in the detergents and petroleum the types of surfactants
a wider net, investigating industries. These molecules depending on the specific
the genetic profile of VSTM1 sport alkyl ‘tails’ containing applications.” The team now
and how this gene could be 12, 14 or 16 carbon atoms, and plans to study how different
involved in other conditions. some have short alkyl groups stimuli trigger the rupture of the
“We have already looked in in various positions on their surfactant micelle structures,
a subset of potential diseases benzenesulfonate ‘heads’. and how the substances trapped
but the search is by no means The researchers first within these structures can be
exhausted,” he says. simulated how the surfactants released for applications.
behaved in a single-molecule
1. Kumar, D., Puan, K. J., layer, trapped between 1. Tan, J. S. J., Zhang, L., Lim, F. C. H. &
Andiappan, A. K., Lee, B., Cheong, D. W. Interfacial properties
Westerlaken, G. H. A., et al. A surfactant (shown in red, yellow and water and a colorless, oily and monolayer collapse of alkyl
A functional SNP associated turquoise) with a 14-carbon ‘tail’ forms hydrocarbon called decane. As benzenesulfonate surfactant
with atopic dermatitis controls an undulating layer between water monolayers at the decane-water
the concentration of surfactant
cell type-specific methylation (colorless) and decane (green), which interface from molecular dynamics
of the VSTM1 gene locus. develops into buds (middle) and then molecules increased to the point simulations. Langmuir 33,
Genome Medicine 9, 18 (2017). free micelles (lower). where the layer was packed with 4461−4476 (2017).
IMMUNOLOGY
NEW STRATEGY
FOR FIGHTING Lund University
and A*STAR
A previously unknown Using an array of infection,” says Petrlova. “We wounds is of evolutionary
mechanism used by the body to techniques, including believe this to be a fundamental significance to our survival.
prevent wound infections has been biophysical, biochemical, and mechanism for taking care of Compared to antibiotics,
discovered by team of researchers microbiological methods, both bacteria and their toxins innate immunity has been
from A*STAR, Lund University, fluorescence and electron during wound healing.” around for millions of years,
Nanyang Technological University, microscopy, and computer and we should consider the
and Copenhagen University1. modeling, the team found that application of these concepts
This finding could provide an enzyme secreted by immune ‘‘Compared in an era of increasing
scientists with a new way to fight cells such as neutrophils and to antibiotics, antibiotic resistance.”
infection, a critical development macrophages cuts up thrombin, innate immunity The team’s finding could
when many microbes are an enzyme that plays an has been around also have implications for dis-
becoming increasingly resistant important role in blood clotting, for millions of eases such as Alzheimer’s and
to antibiotics. into fragments. These thrombin years, and we Parkinson’s. “Various aggregat-
Skin wounds are open fragments then collect bacteria should consider ing proteins can cause amyloid
doors for bacteria to enter the and their toxins together. This the application diseases in the skin or internal
body and cause infections. The occurs rapidly in a wound, of these organs such as the brain,” says
body uses a range of different and the invaders are gobbled concepts in an Petrlova. “Such degenerative
strategies to protect itself up by inflammatory cells. This era of increasing diseases could be caused by
against this threat, including phenomenon was not seen in antibiotic over-activation of a mechanism
resistance.’’
© MOLEKUUL/SCIENCE PHOTO LIBRARY
blood clotting and immune normal blood plasma; it was that is supposed to protect us
responses. In a surprising find, observed only in wounds. from infections.”
Jitka Petrlova at Lund University, The discovery suggests a new
Sweden, together with Peter approach for fighting bacteria. Petrlova says: “Nature has 1. Petrlova, J., Hansen, F. C., van der
Plas, M. J. A., Huber, R. G., Mörgelin,
Bond’s team at the A*STAR “Perhaps, we don’t need to kill effectively created different M. et al. Aggregation of throm-
Bioinformatics Institute, have bacteria with antibiotics. Instead, defense mechanisms, and bin-derived C-terminal fragments
discovered a strategy that we could simply gather them wound healing provides a rich as a previously undisclosed host
defense mechanism. Proceedings of
the body uses to neutralize together and give the body a source of new discoveries. the National Academy of Sciences
invading microbes. helping hand in combating The ability to effectively heal USA 114, E4213–E4222 (2017).
key. “If the exposure is long sources,” says Yong. An to accelerate and scale up the
enough we can kill all of the alternative, the research whole process,” he adds.
spores, including those that suggests, is that a small and
we unintentionally wake up,” low-hazard tabletop X-ray 1. Ha, T. M. H., Yong, D., Lee, E. M. Y.,
© xxxxxxxxxxxxxx
Figure adapted with permission from Ref. 1. Copyrighted by the American Physical Society.
Hua Lee from the A*STAR models and validating their
Institute of High Performance results against large-scale
Computing, in collaboration numerical computations, Yang
0.2 with researchers from China and and his team developed a model
the UK, have now developed a that allows physicists to study
general theoretical framework these topological states over
0 for a promising class of a wide range of conditions,
quantum material systems including states that are common
that will provide a universal in real materials.
-0.2 language for researchers in this “Our work can help both
pioneering field. theorists and experimentalists
“Our framework describes to understand and realize
a class of exotic phases of highly interesting new phases of
matter consisting of a very thin matter,” says Yang.
-4 -2 0 2 4 sheet of electrons subject to a
qx strong perpendicular magnetic 1. Yang, B., Hu, Z. X., Lee, C. H., Papić, Z.
Generalized pseudopotentials for
field,” explains Yang. “Unlike
A universal theoretical framework will help guide research on exotic topological states, the anisotropic fractional quantum
shown here in terms of the spatial distribution of electron states, which could be used to conventional phases of matter Hall effect. Physical Review Letters
realize practical quantum computers. such as liquids or solids, these 118, 146403 (2017).
HOW A COMMON
CANCER HIJACKS A
CANCER BIOLOGY WOUND-HEALING SWITCH
Understanding how head and neck squamous
cell carcinomas takes over wound-healing
processes could yield new treatments.
A*STAR researchers have 2013, Prabha Sampath’s group tongue cells from healthy of the defective switch. They
identified the molecular means by at the A*STAR Institute of patients, but absent from those revealed the precise molecular
which a common form of cancer Medical Biology discovered a from HNSCC patients. Their mechanism involved.
hijacks wound-healing processes molecular switch that triggers finding of elevated FSTL1 Sampath’s group further
to help it spread. The team hope the production of a microRNA expression in HNSCC samples showed that blocking FSTL1 and
their findings could lead to more called miR-198 in healthy skin, suggested the molecular switch DIAPH1 individually not only
effective treatments. and, upon injury, of the protein was indeed defective. In the thwarts the ability of HNSCC
Head and neck squamous cell follistatin-like 1 (FSTL-1). absence of miR-198, they also cancer cells to migrate, but also
carcinoma (HNSCC) is the sixth Given that uncontrolled found increased expression limits the spread of metastatic
most frequently-occurring cancer cell growth and migration of Diaphanous-1 (DIAPH1), tumors in immunodeficient
worldwide. It is caused by the are hallmarks of cancer and a another protein elevated mice. Notably, knocking out both
uncontrolled growth of squamous primary cause for metastasis, following skin wounding. genes simultaneously prevented
cells — thin, flat, scale-like cells Sampath’s team set out to test Using biochemical and formation of metastatic tumor
— in the outer layer of skin called their hypothesis that a defective cell culture experiments, the nodules. Analysis of The Cancer
the epidermis. wound-healing switch could researchers went on to show Genome Atlas (TCGA) data
Upon injury, epidermal cells facilitate HNSCC. that a protein that triggers cell base showed the survival of
called keratinocytes proliferate They used a technique called growth and differentiation HNSCC patients who expressed
and migrate toward wounds, fluorescent in situ hybridization called epithelial growth factor elevated levels of both FSTL1 and
a process that normally stops to show that miR-198 was (EGF), which is often elevated DIAPH1 was significantly shorter
when healing is complete. In expressed in abundance in in HNSCC, acts as a regulator than those who expressed them at
lower levels.
Further investigation
revealed FSTL1 and DIAPH1
promote HNSCC metastasis by
blocking the actions of other
proteins that normally prevent
cell migration.
The findings provide
new targets for therapeutic
intervention. “Additionally, we
are trying to identify biochemical
modulators of this defective
molecular switch which could
© 2017 A*STAR Institute of Medical Biology
Reproduced from Ref. 1 and licensed under CC BY 4.0 (https://creativecommons.org/licenses/by/4.0/) © 2017 E. Kilic et al.
lactoferrin’s receptors are fluorescently labeled the
thought to absorb the protein protein so they could track
and transport it to the lymphatic it through the stages of
system, where it provides its digestion, finding high
beneficial effects. levels of lactoferrin in the small
Kiryukhin, from the intestine and liver. Lactoferrin’s
Institute of Materials Research presence in the liver verifies
and Engineering and his team the protein’s ability to survive
have succeeded in protecting gastric digestion and be
lactoferrin molecules on their absorbed into the tissues of
journey through the stomach the intestine.
by coating them in layers of Kiryukhin says that
gastric-resistant casing. “We his team is now assessing
start with calcium carbonate whether their process is
microparticles. These are commercially viable: “We’re
porous and absorb lactoferrin to in discussions with several
produce a ‘core’ around which companies with regard
we can build our protective to how we can move our
shell,” says Kiryukhin. “Then, we technology forward.”
dissolve the calcium carbonate,
leaving the lactoferrin contained 1. Kilic, E., Novoselova, M. V., Lim, S. H.,
Pyataev, N. A., Pinyaev, S. I. et al.
within micrometer-sized shells, Formulation for oral delivery of
Microcapsule-protected functional proteins could one day form a key part of human
designed to be stable within lactoferrin based on bovine serum
nutrition. Pictured: Calcium carbonate microparticles. After absorbing a functional albumin and tannic acid multilayer
molecule such as lactoferrin, these microparticles act as the core around which layers of gastric fluid, but to degrade in microcapsules. Scientific Reports 7,
gastro-protective coating can be built. intestinal fluid.” 44159 (2017).
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