Sample name Sequencing result Possible reason Suggestion 2016207_ITS_ITS_F 2 2-6 Handler: Tiffany Chen Ext: 137
Sequencing Possible problem Suggestion
result (1-1) Insufficient DNA concentration. (1-1a) Please increase DNA concentration. (1-2)Wrong label of primer (1-2a) Please check primer concentration. concentration. (1) No (1-3) No priming sites (1-3a) Please check the accuracy of the primer. signal (1-4a) Please check the construction was successful or not. (1-4) A failure cloning. (1-4b) Please check the vector has been modified or not. (2-1a)Please re-design a new primer (Tm = 50℃ to (2-1) Low specificity of primer 55℃). (2-2) Insufficient DNA concentration (2-2a) Please increase DNA concentration. (2-3) Primer degradation (N-1, N-2..) (2-3a)Please check the storage condition of primer, or using a fresh dissolved primer instead (2-4a) No single product, please purify the products (2-4) Multiple templates again. (2) Signal (2-4b) Please choose a single colony. disorder (2-5a) Please re-design a primer having only one (2-5) Multiple priming sites binding site. (2-6) Fragment shift mutation (SNP, insertion or deletion). (2-7a) Please remove inhibitors completely among (2-7) Low quality of sample. sequencing reaction (ex: salt, phenol, EDTA, etc.) (2-8a) Please re-prepare the samples and check it (2-8) Sample smear on the gel (3-1a) Please use a new primer from another side. (3-1) Homopoly (T),(A),(G),(C) (3-1b)Please design a new primer to avoid this (3) Signal effect. interrup t (3-2) Secondary structure (3-2a) Please use a new primer from another side. (Repeat sequence, hair pin, (3-2b) Please use structure-releasing reagents. siRNA..) (dGTP, DMSO)
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