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Received: 12 November 2017 | Revised: 23 January 2018 | Accepted: 25 January 2018

DOI: 10.1002/pep2.24049

REVIEW

Decarboxylative couplings as versatile tools for late-stage


peptide modifications

Lara R. Malins

Research School of Chemistry, Australian


National University, Canberra, ACT 2601,
Abstract
Australia While strategies for the late-stage modification of peptides are crucial to the design and synthesis
of new peptide-based materials and therapeutics, synthetic methods have historically focused on
Correspondence
the modification of select, nucleophilic amino acids. This review highlights decarboxylative coupling
Lara R. Malins, Research School of
Chemistry, Australian National University, strategies as emerging tools for the targeted functionalization of native peptidic acids
Canberra, ACT 2601, Australia. —a-carboxylic acids and aspartic/glutamic acid residues—through complexity building CAC and
Email: lara.malins@anu.edu.au CAheteroatom bond formations. Decarboxylation strategies employing both activated carboxylic
acids (redox-active esters) and the direct application of unprotected carboxylic acids are discussed.
Emphasis is placed on the scope and limitations of the methodologies as well as their compatibility
with complex peptide substrates.

KEYWORDS
cross-coupling, decarboxylation, peptide modification, transition-metal catalysis, unnatural amino
acids

1 | INTRODUCTION recent developments in peptide synthesis and more broadly, organic


methodology development.[5] Tools that have long been exploited for
The importance of peptides as biological tools, functional materials, and the functionalization of small molecules (e.g., transition metal-mediated
promising therapeutics underpins a growing demand—from both aca- cross-couplings,[6–8] CAH functionalizations[9,10]) are increasingly being
demic and industrial laboratories—for versatile peptide functionalization developed and optimized for the selective modification of peptides.
strategies.[1,2] Precise structural modifications, particularly the incorpo- Historically, strategies for the direct modification of native pep-
ration of non-native motifs, enable the production of designer peptides tides have mirrored advances in bioconjugation,[11,12] relying exten-
featuring finely tuned biological properties or enhanced therapeutic sively on the reactivity of nucleophilic residues such as cysteine (Cys),
capabilities. Such modifications are particularly relevant to drug discov- lysine (Lys), and tyrosine (Tyr) with carefully tuned electrophiles. Protei-
ery as tools for minimizing the conventional liabilities associated with nogenic alkyl carboxylic acids such as aspartic acid (Asp), glutamic acid
peptide drugs, including a lack of in vivo stability and poor oral bioavail- (Glu), and a-carboxylic acid groups, though abundant in peptide sub-
ability.[3,4] Although the programmed incorporation of unnatural amino strates, have rarely been exploited as handles for functionalization out-
acid building blocks into peptides through iterative solid- or solution- side of the standard mode of activation and amide bond formation.[5]
phase peptide synthesis is now routine, the selective, late-stage intro- An appetite for more diverse means of peptide modification, however,
duction of such important structural modifications onto native amino has fueled a recent surge in decarboxylative functionalizations which
acids remains challenging, owing in part to the strict chemoselectivity exploit ubiquitous proteinogenic carboxylic acids as versatile starting
and reagent compatibility requirements posed by peptide substrates. points for the introduction of non-native amino acids and functional
Nevertheless, the rapid generation of modified peptides directly from groups via CO2 extrusion and subsequent carbonAcarbon or carbon-
native peptide precursors is conceptually appealing as a means of Aheteroatom bond formation (Scheme 1). In most cases, such endeav-
reducing the synthetic burden associated with the preparation of ors are intimately linked to powerful advances in the decarboxylative
orthogonally protected building blocks (typically nontrivial, multistep functionalization of small molecules (including single amino acid sub-
syntheses) and the de novo assembly of each designer peptide target. strates), which have been the subject of several recent reviews.[13–16]
As such, residue-specific modifications have been a focal point of Rather than serve as a comprehensive or historical overview of

Peptide Science. 2018;e24049. wileyonlinelibrary.com/peptidesci V


C 2018 Wiley Periodicals, Inc. | 1 of 16
https://doi.org/10.1002/pep2.24049
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1980s with Sir Derek Barton’s seminal work on the reactivity of amino
acid thiohydroxamate esters 1 (so-called “Barton esters,” see Scheme
2A).[17,18] Prior approaches to the decarboxylation of amino acids, pep-
tides, and proteins relied extensively on heat[19,20] or the intermediacy
of highly unstable acid derivatives (e.g., acyl hypobromites,[21] reminis-
cent of the Hunsdiecker-Borodin reaction). Readily formed from protei-
nogenic carboxylic acids (e.g., 2, Scheme 2A), however, Barton esters 1
are known to fragment under mild conditions in the presence of heat
or light, causing homolysis of the NAO bond and the extrusion of CO2
and 2-pyridylthiyl radical 4 to form an amino acid-derived alkyl radical
S C H E M E 1 Strategies for the modification of peptides via
intermediate 6 (Scheme 2B). This alkyl radical can engage in a number
decarboxylative couplings
of downstream pathways including reduction to the corresponding
decarboxylative transformations, this review focuses specifically on alkane 8 in the presence of a hydrogen atom donor, such as tBuSH, or
advances in decarboxylative couplings for the late-stage modification halogenation with CCl4 or BrCCl3 to afford the Hunsdiecker-Borodin
of native carboxylic acids within peptide substrates (defined here as product 9.[18,22] Giese-type radical addition to an electron deficient ole-
two or more amino acids). Where applicable, readers are referred to fin followed by incorporation of a pyridylsulfide unit at the a-position
relevant reviews and seminal papers underpinning the described trans- to the electron-withdrawing group affords amino acid derivatives such
formations. Herein, synthetic strategies are principally categorized by as 10 (Scheme 2A) .[23]
their use of activated esters (“redox-active esters”) (path A), or unpro- Importantly, Barton showed that transformations of this type were
tected carboxylic acids (path B), as substrates for the extrusion of CO2 amenable to the modification of both side-chain and a-carboxylic acids,
and downstream coupling reactions (Scheme 1). These discrete syn- although a-decarboxylation proved more facile owing to the relative
thetic pathways are further subdivided by the nature of the bond- stability of the a-amino radical formed following loss of CO2.[18] The
forming reaction (CAC bond formation or CAheteroatom bond forma- versatility of Barton esters for decarboxylative transformations on pep-
tion). The aim is to provide readers with a detailed guide to the growing tides was further demonstrated by their compatibility with solid-phase
array of accessible decarboxylative modifications as well as provide a peptide synthesis (SPPS). In 2001, Attardi and Taddei demonstrated
perspective on unmet challenges in the area. the solid-phase synthesis of peptide Barton esters followed by a light
induced Hunsdiecker-Borodin reaction on the resin-bound substrates

2 | DECARBOXYLATION OF ACTIVATED to afford valuable brominated products.[24]


ESTERS
2.2 | Identifying redox-active esters
2.1 | Historical perspectives
In the years following Barton’s seminal work, several additional acti-
Despite the biosynthetic prevalence of amino acid decarboxylation vated esters were explored as suitable substrates for photolytic decar-
reactions, the decarboxylative functionalization of amino acids perhaps boxylative functionalizations, including benzophenone oxime esters
only entered the general lexicon of synthetic chemists in the mid- 11[25] and N-hydroxyphthalimide (NHPI) esters 12 (Scheme 3A).[26–28]

SCHEME 2 A, Barton esters as versatile substrates for decarboxylative couplings; B, Proposed radical mechanism
MALINS | 3 of 16

S C H E M E 3 A, Alternative esters capable of photolytic decarboxylation; B, Proposed mechanism of N-hydroxyphthalimide (NHPI) ester
fragmentation to afford alkyl radical 18; C, Representative products following decarboxylation and trapping of the radical intermediate

Okada et al. demonstrated the advantageous stability of the latter, carboxylic acids as a feasible entry point into conventional, metal-
which are readily prepared, easily isolable, and tolerant of aqueous catalyzed cross-couplings,[15,35,36] the Baran laboratory was first to
[26]
reaction media. Upon irradiation of phthalimide esters with visible report the use of activated carboxylic acids such as 22 as robust alkyl
light in the presence of a photosensitizer (e.g., PS, 13, Scheme 3B), sin-
gle electron transfer (SET) from the excited state of the photosensitizer
14 to ester 12 affords the phthalimide radical anion 15. Protonation
followed by homolysis of the weak NAO bond generates carboxyl radi-
cal 17 which spontaneously decarboxylates to afford carbon centered
radical 18. Okada and coworkers demonstrated that radical intermedi-
ate 18 can subsequently engage a variety of radical traps, including
tBuSH, CCl4, and various electron-deficient olefins to afford the corre-
sponding reduced alkanes 19,[26] chloroalkanes 20,[27] and Michael
adducts 21,[28] respectively (Scheme 3C). The ability to forge addition
products such as 21 is a notable advantage over the use of Barton
esters, whereby the intermediate radical formed following Michael
addition reacts preferentially with the Barton ester thiocarbonyl group
to form a-sulfide products such as 10 (see Scheme 2A).[23] In their
2012 second-generation synthesis of the diterpene (–)-aplyviolene,
Schnermann and Overmann masterfully employed an NHPI ester to
facilitate the decarboxylative addition of a tertiary radical to an
a,b-unsaturated ketone.[29] Carried out in the presence of light and
catalytic [Ru(bpy)3Cl2] in aqueous THF, this transformation provided
a mild and selective approach to radical formation and afforded the
target product without incorporation of the 2-pyridylthio group.
Decades after the initial disclosure of decarboxylative transforma-
tions using the versatile activated esters outlined in Schemes 2 and 3,
the synthetic utility of these venerable intermediates became a source
of renewed excitement, owing to the seminal work of several research
groups.[30–33] The pivotal realization—that carbon-centered radicals
(e.g., 18) formed through decarboxylation of activated alkyl esters can
engage in conventional cross-coupling pathways—markedly expanded
the retrosynthetic utility of carboxylic acid derivatives. Unlike conven-
tional metal-catalyzed CAC bond-forming reactions, which rely heavily
SCHEME 4 A, Application of “redox-active esters” in nickel-
on alkyl and aryl halides as starting electrophiles,[34] activated esters
catalyzed decarboxylative cross-couplings with arylzinc reagents; B,
are simple and readily accessible, serving as robust chemical feedstocks
Cross-electrophile coupling employing redox-active esters; C, Pro-
for a vast array of complexity-building reactions. Drawing on earlier posed catalytic cycle involving decarboxylative fragmentation of
studies which demonstrated the decarboxylative metalation of aryl radical anion 28 to form radical intermediate 29
4 of 16 | MALINS

SCHEME 5 Overview of decarboxylative couplings employing peptide redox-active esters (RAEs)

coupling partners in metal-catalyzed CAC bond formation in early initial transmetalation of arylzinc reagent 23, forming the key ligated
[30]
2016 (Scheme 4A). The authors identified that the radical decarbox- aryl-Ni complex (Scheme 4C).[30] SET from the metal center to the
ylation of Barton esters could be triggered, at room temperature in the phthalimide ester 22-NHPI forms radical anion 28 which spontaneously
absence of light, through single-electron transfer (SET) from a suitable fragments, losing CO2, and forming alkyl radical 29. Recombination of
transition-metal complex (Scheme 4A). The transition metal catalyst (a the alkyl radical with the Ni complex followed by reductive elimination
ligated aryl-nickel complex formed from NiCl2, a bipyridine ligand, and forms the cross-coupled product 24, closing the catalytic cycle. The
arylzinc reagent 23) could also mediate downstream CAC bond forma- putative involvement of radical intermediates in this process was con-
[30]
tion, affording the valuable alkyl-aryl cross-coupled product 24. firmed through ring-opening of a carboxylic acid bearing a cyclopro-
The photosensitivity of Barton esters prompted a search for more pane unit.[30]
practical activated ester alternatives, or so-called redox-active esters Given the overlap between redox-active esters (RAEs) and the
(RAEs), also capable of accepting an electron from a suitable metal- intermediates formed using standard peptide coupling reagents, it is
catalyst. In addition to Okada’s priviledged phthalimide ester 22- perhaps unsurprising that RAEs have gradually emerged as powerful
NHPI,[26–28] and the related tetrachloro-variant 22-TCNHPI, N-hydrox- tools for the coupling of peptide-based alkyl carboxylic acids. In addi-
ybenzotriazole esters 22-HOBt and 22-HOAt—commonly employed in tion to a variety of nickel-catalyzed transformations,[30,37–42] concur-
[30]
peptide couplings—were also suitable substrates (Scheme 4A). Weix rent work has exploited Okada’s photoinduced fragmentation of
and coworkers independently reported a concurrent nickel-catalyzed phthalimide esters[26] for the decarboxylative arylation,[32,33,43] thiola-
decarboxylative cross-coupling of N-hydroxyphthalimide esters 25 with tion,[44] and selenation[45] of peptide substrates (vide infra). Despite a
[31]
aryl iodides 26 in the presence of zinc metal (Scheme 4B), serving as conceptual similarity to prior work on decarboxylative functionaliza-
a testament to the generality of such carboxylic acid derivatives as tions, the renewed impetus for the contemporary advancement of
robust alkyl radical precursors. Mechanistically, such reactions are RAE-mediated decarboxylative couplings stems largely from a growing
thought to proceed through a pathway similar to Okada’s photolytic demand for modified peptides from both academia and industry. New
decarboxylation (see Scheme 3B). In the absence of light and a photo- methods are additionally underpinned by an enhanced understanding
catalyst, however, the key electron-transfer step is thought to be medi- of transition-metal-catalyzed and photochemical processes, setting the
ated by the metal center. Baran and coworkers proposed that the stage for rapid and powerful additions to the repertoire of decarboxyla-
nickel-catalyzed arylzinc coupling (outlined in Scheme 4A) involves an tive functionalizations and allowing access to more diverse peptide
MALINS | 5 of 16

SCHEME 6 On-resin nickel-catalyzed decarboxylative alkyl-alkyl couplings employing peptide TCNHPI esters

products. Scheme 5 summarizes very recent methods—most reported protected allyl esters 30 which, following elongation of the target pep-
within the past 2 years—for peptide modifications which utilize RAEs, tide on the solid-phase, could be readily unmasked upon treatment
particularly phthalimide esters, as a starting point for the diverse decar- with Pd(PPh3)4 and phenylsilane. On-resin activation of peptide acids
boxylative functionalization of peptides. The following sections, subdi- was preferentially performed using excess DIC and tetrachloro-N-
vided by the nature of the bond-forming reaction, will discuss the hydroxyphthalimide (TCNHPI) 32 in the presence of DMAP at 378C.
scope and limitations of these methodologies. Treatment of the resin-bound RAE 33 with NiCl2glyme, ligand di-tert-
butylbipyridine, and various alkylzinc reagents then afforded modified
2.3 | CAC bond formation peptides 34-38, following simple washing steps and acidic cleavage from
the resin.[37]
Tools for CAC bond formation are paramount to building molecular
Conventional advantages associated with solid-phase chemistry—
complexity and are amongst the most oft-used strategies in drug dis-
the use of excess reagents (2 equiv. of the nickel/ligand complex, 20
covery.[46] Within the context of peptides, the decarboxylative cross-
equiv. of the alkylzinc reagent) and ease of purification—facilitated the
coupling of activated esters is quickly emerging as a powerful approach
rapid diversification of resin-bound substrates. Products derived from
to the targeted functionalization of peptides, given the relative stability
both side-chain (34 and 35) and a-carboxylic (36 and 37) acids were
and abundance of proteinogenic carboxylic acids and their ease of acti-
feasible, as was the dual-functionalization of Asp and Glu (38). Side-
vation. The following sections outline metal-catalyzed and photochemi-
chain modifications proceeded with complete retention of a-chirality,
cal cross-couplings of peptidic alkyl carboxylic acid derivatives with
affording homogeneous peptide products with valuable synthetic han-
C(sp3)-, C(sp2)-, and C(sp)-hybridized coupling partners.
dles including alkenes. While transformations generally occurred in
3 3 good yields based on the original resin-loading, byproducts associated
2.3.1 | C(sp )AC(sp ) coupling
with hydrolysis of the activated ester, net reduction via a
Alkylation
decarboxylation-hydrogen-atom abstraction pathway, and aspartimide
Shortly after demonstrating the feasibility of nickel-catalyzed decarbox-
or glutimide formation following side-chain activation account for the
ylative arylations on small-molecule substrates, the Baran laboratory
mass-balance.[37] Strategies to reduce byproduct formation would sim-
reported in 2016 a robust method for the decarboxylative alkylation of
plify iterative couplings, ideally allowing for the robust incorporation of
resin-bound peptide-RAEs with alkylzinc reagents (Scheme 6).[37] Tak-
two or more discrete unnatural variants.
ing advantage of the similarities between RAEs and standard peptide
coupling reagents for amide-bond formation, this solid-phase approach Giese reaction
to CAC bond formation utilized peptides forged under standard Fmoc- Drawing from the early successes of Barton[23] and Okada[28] on decar-
solid-phase peptide synthesis (SPPS) conditions on Rink amide resin. boxylative Giese reactions, Baran and coworkers extended their suite
The target carboxylic acids 31 were incorporated as orthogonally of on-resin, nickel-catalyzed RAE modifications to include reactions
6 of 16 | MALINS

S C H E M E 7 Decarboxylative Giese reactions employing peptide NHPI esters. A, Resin-bound carboxylic acid; B, Resin-bound acrylamide
acceptor; C, Solution-phase macrocyclization via an intramolecular Giese reaction

with electron-deficient alkenes (Scheme 7A).[40] Following activation as LiCl, and Zn powder to afford modified peptides 40 and 41, respec-
the corresponding NHPI-ester, resin-bound acid 39 could be coupled tively. Alternatively, solid-supported alkene 43 could be coupled with
with phenylvinylsulfone or acrylonitrile in the presence of Ni(acac)2, an excess of proline-derived RAE 42 to afford peptide 44 incorporating
a g-amino acid (Scheme 7B). Finally, bifunctional peptide 46, bearing an
NHPI ester and a Lys-linked acrylamide moiety could engage in a
solution-phase, intramolecular Giese reaction, forming the structurally
intriguing macrocycle 47 as a mixture of diastereomers at the Pro
a-position (Scheme 7C).[40]

2.3.2 | C(sp3)–C(sp2) and C(sp3)–C(sp) couplings


Arylation
In 2016, H. Fu and coworkers reported a collection of high-yielding,
photochemical decarboxylative peptide a-arylations employing NHPI
esters (Scheme 8).[32,43] The authors first disclosed the visible-light
assisted, ruthenium-catalyzed coupling of peptide RAEs such as 48
with 2-isocyanobiphenyl 49 to afford the 8-methylphenanthridine
derivatives 50-52 in excellent yields (Scheme 8).[32] An intriguing modi-
fication of the protocol allowed formation of pentapeptide 52 in the
absence of a conventional photocatalyst.[43] The reaction was instead
carried out in the presence of Cs2CO3 and catalytic 4-(trifluoromethyl)
thiophenol under visible-light irradiation to afford the arylated product.
S C H E M E 8 Arylation of peptide NHPI esters with 2- In the same study, the authors also demonstrated thiophenol-catalyzed
isocyanobiphenyl 49 under visible light irradiation decarboxylative aminations and Giese reactions, albeit on single amino
MALINS | 7 of 16

S C H E M E 1 0 Nickel-catalyzed peptide alkenylation and


alkynylation employing NHPI redox-active ester 58

photocatalytic approach by H. Fu and coworkers utilizes amino acid


SCHEME 9 Decarboxylative arylation of a-carboxylic acids via a-NHPI esters and a variety of terminal alkynes in the presence of
direct CAH coupling of heteroarenes [Ru(bpy)3]Cl2/CuI to accomplish the decarboxylative alkynylation of
single amino acid derivatives.[53] Though not yet employed as a
acid substrates.[43] Employing a more conventional photocatalytic sys-
means of peptide modification, the ability to utilize terminal alkynes,
tem, Shang, Y. Fu, and coworkers later demonstrated the coupling of
rather than preformed alkynylzinc reagents, is an attractive feature
diverse heteroarenes with peptide acids via co-catalysis with iridium
of this approach.
photocatalyst 54 and phosphoric acid PA-1 under irradiation with blue
LEDs (Scheme 9).[33] Products 55-57, bearing valuable, pharamaceuti- 2.3.3 | Advances in RAE synthesis for CAC bond formation
cally relevant heteroaryl motifs, have promising applications in peptide In a recent effort to streamline nickel-catalyzed decarboxylative pep-
drug discovery. While differing in the precise mode of photoexcitation, tide cross-couplings into a facile one-pot protocol and overcome diffi-
each arylation reaction described above is mechanistically linked by a culties with the sluggish in-solution activation of peptides using DIC
putative alkyl radical intermediate formed following decarboxylation—a and TCNHPI (32, see Scheme 6), Baran and coworkers developed a
process reminiscent of the photoinduced phthalimide fragmentation versatile new reagent for RAE synthesis. Inspired by the superior reac-
reported by Okada and coworkers.[26–28] tivity of uronium-based, “all-in-one” peptide coupling reagents such as
HATU, the group reported the multi-kilogram scale synthesis of tetra-
Alkenylation
chloro-N-hydroxyphthalimide tetramethyluronium hexafluorophos-
The direct incorporation of alkenes into peptide substrates facilitates
phate (CITU) 63, a tetramethyluronium derivative of TCNHPI (Scheme
an array of important downstream modifications, including applications
11).[41] The bench-stable coupling reagent facilitates a host of decar-
relevant to peptide stapling[47] and thiol-ene couplings.[48–50] In early
boxylative nickel-catalyzed transformations, including solid-phase
2017, the Baran lab reported a nickel-catalyzed decarboxylative alkeny-
lation strategy employing peptide RAEs.[38] Using various alkenylzinc
reagents, the method allows for the stereoselective incorporation of
substituted olefins. Application to the late-stage modification of an
unprotected peptide-NHPI ester 58 provided the valuable isopropenyl
(59) and styrenyl (60) peptide products (Scheme 10).

Alkynylation
A conceptually similar approach to C(sp3)–C(sp) couplings was accom-
plished by Baran and coworkers, through the cross-coupling of
peptide-NHPI ester 58 with ethynylzinc chloride 61 to afford the cov-
eted alkyne moiety (Scheme 10).[39] As expected, terminal alkyne 62
was a suitable substrate for the copper-catalyzed azide-alkyne cycload-
dition (CuAAc) reaction with benzyl azide to afford the corresponding
triazole product. The importance of alkynylated peptide targets for bio-
conjugation[11,12,51] and recent strategies for peptide macrocycliza-
SCHEME 11 CITU 63 as a versatile activating agent for one-pot,
tion[47,52] render this particular methodology a prominent addition to nickel-catalyzed decarboxylative cross-couplings with alkyl, alkenyl
the toolbox of late-stage peptide modifications. An alternative, and alkynyl zinc reagents
8 of 16 | MALINS

In 2017, Baran and coworkers accomplished the decarboxylative


cross-coupling of peptide NHPI esters with B2pin2 (Scheme 12)[42] to
rapidly afford peptide boronate esters. The nickel-mediated transfor-
mation was aided by the addition of magnesium salts and the pre-
mixing of B2pin2 with MeLi, which served to activate the boron for
transmetalation. While the method provided initial access to peptide
pinacol boronate esters (e.g., 68), facile hydrolysis also afforded the
analogous boronic acids. Accessible peptide products included Ninlaro
(70), various di- and tripeptide derivatives (71–73)—including precur-
sors to potent new human neutrophil elastase inhibitors—and remark-
ably, a borylated variant of the peptide antibiotic vancomycin (74).
While the general use of the strongly basic MeLi might pose concerns
for base-sensitive motifs, precomplexation of B2pin2 with MeLi ren-
dered the method compatible with standard Fmoc-protecting
groups.[42]
In mid-2017, Aggarwal and coworkers reported a complimentary,
transition-metal free, photoinduced decarboxylative borylation strategy
for the conversion of NHPI esters into the corresponding pinacol boro-
SCHEME 12 Nickel-catalyzed decarboxylative borylation of nate esters through irradiation with visible light.[58] Although not dem-
peptide NHPI esters affording peptide boronate esters and peptide onstrated explicitly on peptide substrates, the successful
boronic acids
decarboxylative borylation of a glutamic acid side-chain suggests that
this methodology may be similarly extendable to the late-stage modifi-
alkylation and arylation, and solution-phase alkylation (65 and 66), alke- cation of peptides.
nylation (59), and alkynylation (62). The reagent outperforms a one-pot
alkylation protocol employing HATU and proved superior to preacti-
2.4.2 | C(sp3)–S and C(sp3)–se bond formation
vated NHPI esters (see 58, Scheme 10). Importantly, initial evaluation Concurrent with their work on visible-light induced, thiophenol-
of the explosivity of the reagent suggests that, unlike benzotriazole- catalyzed CAC bond formation[43] (see 2.3.2), H. Fu and coworkers
based coupling reagents,[54] CITU is not explosive. The promising safety reported conditions for the arylthiolation of amino acids and a tri-
profile renders the reagent an attractive option for the potential scale- peptide substrate (Scheme 13A).[44] Beginning with tripeptide 75
up of decarboxylative couplings.[41] bearing a C-terminal proline a-NHPI ester, photoirradiation in the
presence of Cs2CO3 and a substituted thiophenol derivative
2.4 | CAheteroatom bond formation afforded peptide product 76 in 73% yield. The feasibility of the

As with CAC bond formation, the introduction of heteroatom function-


alities onto peptide substrates via the decarboxylative cross-coupling
of redox-active esters is a burgeoning area of research. The resulting
peptide products feature valuable nonproteinogenic functionalities,
including boronic acid derivatives,[42] arylsulfides,[44] and aryl- and alkyl-
selenides,[45] incorporation of which would otherwise require the syn-
thesis of challenging unnatural amino acid building blocks.

2.4.1 | C(sp3)–B bond formation


In addition to their limitless potential as substrates for various
organic transformations,[55] boronic acids are intriguing bioisosteric
replacements of peptide carboxylic acids[56] and attractive therapeu-
tic candidates. Two peptide alkyl boronic acid derivatives, Velcade
and Ninlaro, are FDA-approved proteasome inhibitors whose bioac-
tivity is attributed to their C-terminal alkyl boronic acid moieties.[57]
Though conventional syntheses of such molecules rely on a building
block approach—incorporating a preformed amino boronic acid into
S C H E M E 1 3 Decarboxylative CAheteroatom bond formation
the peptide-chain—replacement of a proteinogenic carboxylic acid
employing peptide NHPI esters; A, metal-free decarboxylative
with a boronic acid group represents a more efficient and direct dis- arylthiolation, and B, ruthenium-catalyzed decarboxylative selena-
connection strategy. tion of side-chain NHPI esters
MALINS | 9 of 16

2.5 | Scope and limitations of redox-active ester (RAE)


decarboxylation strategies
As discussed in sections 2.3 and 2.4, emerging RAE-based decarboxylative
coupling strategies are highly versatile, featuring the formation of diverse
CAC bonds and valuable CAheteroatom bonds from activated peptide
carboxylic acids. Methods utilize remarkably mild SET processes—medi-
ated by a transition-metal catalyst or a photocatalytic system—to transfer
S C H E M E 1 4 Representative photochemical approach to the direct an electron into the RAE and promote radical fragmentation. This process
radical decarboxylation of carboxylic acids to form radical enables the formation of both stabilized a-amino and non-stabilized pri-
intermediate 18 mary radical intermediates from a-acids and side-chain acids, respectively.
Notably, transformations on side-chain Asp and Glu retain the a-chirality
transformation in the absence of an added photocatalyst is attrib- of these residues. The installation of unnatural motifs, both in solution and
uted to the ability of a putative Cs2CO3-phthalimide ester complex on the solid-phase, provides rapid access to diverse and high-value peptide
to absorb visible light. The excited state phthalimide complex is targets, including substrates poised for further functionalization.
thought to accept an electron from an aryl thiolate forming the cor- The technologies for decarboxylative functionalization of peptide
responding thiyl radical and a phthalimide radical anion (cf., 15, RAEs described above are rapidly maturing. Nevertheless, the current
Scheme 3B) capable of decarboxylative fragmentation to the key methodologies have limitations in scope and applicability that may guide
alkyl radical intermediate. [44] future developments. One notable drawback associated with RAE cou-
The same authors employed a more conventional ruthenium pho- plings is the requirement for a discrete activation step. Although esterifi-
tocatalyst for the visible-light promoted, decarboxylative arylselenation cations of amino acids are generally facile, they lengthen the synthetic
of an AspPro dipeptide (Scheme 13B).[45] Decarboxylation of the Asp process and limit the overall atom-economy of the decarboxylative
side-chain NHPI-ester 77 and concomitant coupling with diphenyldise- transformation, as the activator is not typically recycled. Recalcitrant sub-
lenide afforded modified dipeptide 78. Though not explicitly demon- strates can also pose considerable challenges. Inventive coupling
strated on additional peptide substrates, the reaction conditions were reagents such as CITU[41] (section 2.3.3) are just beginning to streamline
also amenable to the functionalization of glutamic acid and the installa- the process and enhance reactivity over standard carbodiimide-based
[45]
tion of diverse aryl- and alkylselenides. activations. In addition, the scope of coupling reactions, while broad, has

SCHEME 15 Overview of strategies for the direct decarboxylative coupling of peptide carboxylic acids
10 of 16 | MALINS

S C H E M E 1 6 Iridium-mediated photocatalytic decarboxylative Giese reactions employing unprotected carboxylic acids. A, Intermolecular
Giese reaction; B, an intramolecular Giese approach to peptide macrocyclization

not yet been fully vetted on the entire suite of proteinogenic amino it allows for the functionalization of native carboxylic acids without the
acids. Frequent use of reactive organozinc reagents (which typically need for preactivation through RAE formation. Contemporary strat-
require fresh preparation) may limit compatibility with unprotected resi- egies for direct couplings rely heavily on photo-induced electron trans-
dues. It is therefore envisioned that the extension of RAE-mediated fer (PET) as a means of mildly and selectively triggering the
decarboxylative couplings in the future will focus on the application of decarboxylative fragmentation of an unprotected acid (Scheme 14).[62]
[59]
readily accessible and benign coupling partners, such as boronic acids Upon irradiation with light, a suitable photocatalyst (traditionally a
[33]
or unfunctionalized arenes and heteroarenes via direct CAH cou- high-value iridium or ruthenium-based complex) can accept photons to
plings. Promising methods that have thus far only been demonstrated on generate an excited state complex which is highly oxidizing. Deproto-
single amino acids, including H. Fu’s thiophenol-catalyzed decarboxyla- nation of the starting carboxylic acid, followed by single-electron oxida-
tive amination strategy[43] (see section 2.3.2), an approach to substituted tion—the transfer of an electron from the carboxylate 79 to the excited
peptide alkynes using alkynyl sulfones,[60] and a recent decarboxylative photocatalyst—forms a carboxyl radical 80. Spontaneous fragmentation
silylation manifold,[61] may also serve as important proof-of-concept leads to the loss of CO2 and formation of radical 18, analogous to that
studies for the development of new peptide-based methods. Given the produced following RAE fragmentation and now poised for subsequent
simplicity of routine solid-phase peptide synthesis using various auto-
functionalization (see Scheme 14 for a representative example). Devel-
mated platforms, it is further envisaged that the adoption of decarboxy-
opments in photocatalytic systems have enabled access to alkyl radicals
lative transformations would greatly benefit from the development and
using a variety of alternative photosensitizers and under various reac-
optimization of new strategies amenable to automation.
tions conditions.[63] Importantly, amino acid alkyl radicals generated in
this manner are also known to engage readily with suitable radical traps
3 | DIRECT DECARBOXYLATION OF or to be intercepted by standard transition-metal-catalyzed cross-cou-
CARBOXYLIC ACIDS
pling cycles,[63–66] setting the stage for downstream diversification.
Other intriguing approaches to the direct functionalization of
3.1 | Background
native peptide a-carboxylic acids include chemical and electrochemical
In addressing the limitations of RAE-mediated couplings, direct decar- oxidative decarboxylations (see Scheme 24, vide infra). While often not
boxylation is an attractive approach to the modification of peptides as classified as conventional “coupling” reactions, such oxidative
MALINS | 11 of 16

transformations proceed through reactive acyl iminium intermediates,


which may be trapped with a variety of nucleophiles for the diverse
functionalization of peptides.
The following sections will outline representative transformations
which utilize proteinogenic carboxylic acids for the direct late-stage
modification of peptide substrates. Categorized by the key bond-
forming reaction, particular attention will be paid to developments in
the photocatalytic, electrochemical, and chemical systems used to
accomplish such transformations. An overview of methods to be dis-
cussed is provided in Scheme 15.

3.2 | CAC bond formation


Over the past several years, there has been a surge in the discovery of
photocatalytic methods for the direct decarboxylative coupling of car-
boxylic acids to forge new CAC bonds. Most strategies were originally
disclosed for the diversification of small molecules, often including
a-amino acids as substrates.[14,62,63] However, as modified peptides
have become increasingly important synthetic targets (and excellent
proving-grounds for evaluating reaction chemoselectivity),[5] contem-
porary studies have branched into the development and optimization
of such strategies for late-stage peptide modifications. A summary of
these endeavors is provided in the following sections.

3.2.1 | C(sp3)–C(sp3) coupling


Giese reaction
In 2014, MacMillan and coworkers reported a photocatalyzed, direct
decarboxylative Giese reaction between the electron deficient alkene
81 and several simple dipeptide substrates (Scheme 16A).[67] The meth-
odology employed iridium photocatalyst 54 (see Scheme 9) and visible-
light irradiation to forge a new CAC bond at the peptide C-terminus S C H E M E 1 7 A, Substrate scope of flavin-mediated decarboxyla-
(82-84). The extension of this methodology to an intramolecular variant tive Giese reaction on unprotected peptides; B, Selective C-
terminal decarboxylative modification of peptide and protein
for peptide macrocyclization was accomplished shortly thereafter[68]
targets
and concurrently with the nickel-catalyzed Giese macrocyclization
approach discussed in section 2.3.1.[40] Subjecting peptide substrates
bearing an N-terminal acrylamide unit and a free carboxylic acid at the terminal modification to take place under high dilution conditions
C-terminus (e.g., 85, Scheme 16B) to Ir-catalyzed PET conditions, Mac- (1 mM with respect to the peptide substrate), in aqueous buffer and at
Millan and coworkers were able to successfully access a range of room temperature. In phosphate buffer at pH 7, the vast majority of
intriguing macrocyclic peptide variants (86-89). Reactions were selec- amino acid side-chain functionalities, including carboxylic acids, were
tive for C-terminal acids in the presence of unprotected side-chain tolerant to reaction with electrophile 81. Although lower yields were
acids (87) owing to the enhanced stability of the a-amino radical inter- observed in the presence of Lys, Tyr, and His residues (entries 2, 8, 14,
mediate. Several other protected amino acid side-chains were tolerated Scheme 17A), optimization of the reaction pH and/or photocatalytic
in the transformation, as were varying ring-sizes in the products, which system led to marked improvements in reaction yields.[69]
ranged from 11-member ring 89 to a 47-membered (15-amino acid) In an impressive exploration of the scope of the chemistry, the
[68]
macrocyclic product. authors successfully modified several peptide targets varying in size
Taking full advantage of the chemoselectivity observed in the and complexity.[69] Representative examples (e.g., 94-96), bearing sev-
intramolecular Giese reactions depicted in Scheme 16, MacMillan and eral side-chain carboxylic acids, are shown in Scheme 17B. In the case
coworkers subsequently reported a powerful photocatalytic approach of ZHER affibody, a 58-amino acid peptide binder of HER2, byproducts
for the direct and selective decarboxylative modification of C-terminal resulting from the conjugate addition of internal lysine residues to
peptide and protein carboxylates (Scheme 17).[69] Beginning with small Michael acceptor 81 led to the exploration of 3-methylene-2-
model peptides (e.g., tetrapeptides such as 90, bearing a diverse range norbornanone as an alternative radical trap, affording C-terminally
of amino acids at the N-terminus), the authors optimized novel, water- modified peptide 95 in 31% yield. Employing a 3-methylene-2-
soluble flavin-based photocatalytic systems (91 and 92) which allow C- norbornanone derivative bearing a valuable alkyne handle, MacMillan
12 of 16 | MALINS

SCHEME 19 Peptide macrocyclization via photo-induced biradical


couplings of peptides bearing C-terminal carboxylic acids and N-
terminal phthalimides

polymer 109, with an average molecular weight Mn 5 9400.[73] Nota-


bly, the polymerization also proceeded with a-acids, demonstrating the
versatility of the phen/1,4-DCB reaction system for mild and general
decarboxylative modifications.

Macrocyclization via radical-radical coupling


The importance of cyclic peptides as therapeutic candidates has
prompted intense research efforts into the development of new modes
of cyclization (see sections 2.3.1 and 3.2.1.). Reported independently
SCHEME 18 Direct decarboxylative Giese reactions employing a by Griesbeck[74,75] and Mariano,[76] linear peptides bearing an N-
phenanthrene (phen)/dicyanobenzene (DCB) organic photocatalyst terminal phthalimide and a free C-terminal carboxylic acid can undergo
system a novel decarboxylative photocyclization involving a net C(sp3)–C(sp3)
bond formation. Following irradiation of the linear peptide 110 and
excitation of the N-terminal phthalimide group, intramolecular SET can
and coworkers were also able to selectively monoalkylate the A chain
occur, leading to oxidation of the C-terminus, concomitant extrusion of
of human insulin to afford 96 in the presence of three disulfide link-
CO2, and the subsequent formation of biradical 111 (Scheme 19).
ages, several internal Glu residues and, remarkably, the terminal carbox-
Cyclization of the biradical intermediate forms diverse and rigidified
ylate of the insulin B chain. Future studies employing norbornanone
macrocyclic peptide products such as 112[76] and 113.[74]
Michael acceptors incorporating other bioorthogonal handles (e.g.,
azides, biotin) will no doubt expand the scope of this methodology for Allylation
the late-stage functionalization of peptides and proteins.[69] Access to a-allylated dipeptides such as 115–117 via a dual-catalyzed
Yoshimi and coworkers have reported a complimentary approach photochemical transformation was reported by Tunge and coworkers
to direct, photoinduced decarboxylative Giese reactions by employing in 2015 (Scheme 20).[77] C-terminal carboxylic acids were irradiated
phenanthrene (phen) 97 and 1,4- or 1,3-dicyanobenzene—1,4-DCB 98 with blue LEDs in the presence of iridium photocatalyst 54, Pd(PPh3)4,
or 1,3-DCB 99, respectively—as a novel photocatalytic system (Scheme
18).[70,71] Mechanistically, excitation of phen in the presence of light is
followed by SET from the excited state of phen to the DCB derivative,
forming a phen radical cation. Oxidation of the peptide carboxylate by
the phen radical cation forms the same peptide carboxyl radical 80
implicated in standard transition-metal based photocatalytic cycles (see
Scheme 14). Extrusion of CO2 forms the alkyl radical 18, which may
participate in a variety of subsequent radical transformations.[72] The
scope of peptide substrates for the Giese reaction includes the cou-
pling of various tripeptide a-acids with acrylonitrile 100 (products 103-
107),[71] and the coupling of a dipeptide with Val-Val acrylamide 101 to
afford peptide 108, albeit in lower yields.[70] Finally the free radical
polymerization of a tripeptide bearing a free side-chain glutamic acid S C H E M E 2 0 Decarboxylative allylation of C-terminal peptide car-
with excess methyl acrylate (100 equiv.) afforded peptide-capped boxylic acids using dual Pd/Ir-catalysis
MALINS | 13 of 16

variety of aromatic nitriles to a-amino acid derivatives, including Fmoc-


protected dipeptide 122 to afford pyridine substituted peptide 123.[81]
A complimentary, iridium-catalyzed photocatalytic approach to
a-arylation using aryl nitriles was reported by MacMillan and
coworkers.[82] Although demonstrated exclusively on single amino acid
substrates, the relatively broad scope of this transformation should
facilitate its extension to peptide substrates in the future.

3.3 | C–heteroatom bond formation


The following sections discuss approaches to CAH/D and CAO bond
S C H E M E 2 1 Tandem oxidative decarboxylation-Mannich reaction formation through the decarboxylative functionalization of unprotected
under visible-light irradiation aliphatic carboxylic acids. While not all transformations are strictly cou-
pling reactions, their relevance as late-stage, decarboxylative modifica-
and allyl methyl carbonate 114 to afford designer peptides in moderate
tions of peptide substrates warrants their inclusion. Furthermore, the
to good yields. Interestingly, amino acid allyl esters were also feasible
high-value peptide products accessible using such methodologies
substrates in the allylation reaction, allowing for both the direct reac-
(including, for example, isotope labeled products and access to peptido-
tion of unprotected carboxylic acids or utilization of an allyl-protected
mimetic scaffolds) render these transformations valuable additions to
variant. Mechanistically, the authors hypothesize that an initial Pd-
the peptide modification toolbox.
mediated deallylation affords the peptide carboxylate and a cationic
palladium-p-allyl species. Single-electron oxidation of the peptide car- 3.3.1 | C–H or C–D bond formation (via reduction)
boxylate by a photoexcited iridium catalyst induces radical decarboxyl-
The Yoshimi lab has extended the versatility of the phen/DCB organic
ation to form the alkyl radical intermediate. Allylation is feasible
photocatalytic system (see section 3.2.1.) to include strategies for the
through two possible pathways: (A) peptide radical coordination with
reductive decarboxylation of peptidic acids.[71] While conceptually similar
the palladium p-allyl complex followed by reductive elimination; or (B)
to the venerable Barton decarboxylation reaction (see Scheme 2), this
Ir-mediated allyl radical formation and subsequent radical-radical
variation does not require a discrete preactivation step. Rather, in the
coupling.[77]
presence of tert-dodecanethiol, PET-mediated, C-terminal decarboxyl-
Oxidative Mannich reaction ation of native tripeptide 126 proceeded smoothly to afford reduced
The enzyme-catalyzed oxidative decarboxylation of carboxylic acids is a peptide variant 127 (Scheme 23A).[71] Interestingly, a modified solvent
[78] system provided a facile strategy for the precise incorporation of a deu-
common transformation in various biosynthetic pathways. Chemical
variations on this theme for the modification of peptides therefore rep- terium label (Scheme 23B).[83] Proton/deuterium exchange of tert-dodec-
resent intriguing biomimetic strategies. To this end, a tandem oxidative anethiol in D2O allows for the formation of a sulfur-deuterium bond
decarboxylation-alkylation approach was reported by Hernandez, Boto, which can engage the photocatalytically generated peptide alkyl radical
and coworkers (Scheme 21).[79,80] Treatment of C-terminal peptide in a deuterium-abstraction event. On tripeptide substrate 128, reduction
acids with PhI(OAc)2 and I2 under visible-light irradiation facilitated C- occurred to afford 129 in 73% yield with >95% deuterium
terminal decarboxylation and subsequent oxidation to a valuable N-acyl incorporation.[83]
iminium intermediate (see Scheme 24, vide infra). Subsequent Mannich An alternative, visible-light mediated approach employing an acri-
reaction in the presence of silyl ketene acetal 118 and BF3OEt2 facili- dinium photocatalyst system (132) was disclosed by Wallentin and
tated C-terminal alkylation of the iminium intermediate and the intro-
duction of valuable b-amino acid derivatives. The reaction was
demonstrated on a variety of dipeptide substrates, affording products in
good yields (see Scheme 21, 119-121 for representative examples).[80]

3.2.2 | C(sp3)–C(sp2) coupling


Arylation
In 2016, Opatz and coworkers reported a phenanthrene (phen)-based
photochemical strategy for the arylation of a-amino acid derivatives
(Scheme 22).[81] The methodology exploits the phen/1,4-DCB organic
photocatalyst system employed by Yoshimi and coworkers for intermo-
lecular Giese reactions (see Scheme 18),[70,71] taking advantage of the
authors’ observation that 1,4-DCB itself was capable of coupling to a tri-
peptide substrate 124 in the absence of other radical acceptors.[71] S C H E M E 2 2 Phenanthrene (phen) mediated arylation of
Armed with this knowledge, Opatz and coworkers successfully coupled a a-carboxylic acids with aryl nitriles
14 of 16 | MALINS

An adaptation of Seebach’s method employing the chemical oxidant


Pb(OAc)4 rather than anodic oxidation facilitated the formation of
acetate derivatives 141-143 (Scheme 24B).[88] Importantly, both sets
of N,O-acetal derivatives were shown to be suitable substrates in
various nucleophilic substitution reactions. For example, treatment
with triphenylphosphite or allyltrimethylsilane in the presence of
TiCl4 leads to functionalized peptide derivatives such as 144[85] or
145[86] (Scheme 24C). The acidic hydrolysis of N,O-acetals also leads
to C-terminally truncated peptide variants following cleavage of the
terminal residue.[85]

3.4 | Scope and limitations of direct decarboxylation


strategies
The direct decarboxylative coupling strategies described in the previous
sections enable the modification of native peptide carboxylic acids with-
out the need for a preactivation step. Such methods facilitate the for-
mation of diverse CAC bonds, including C-terminal decarboxylative
alkylation and arylation, as well as strategies for CAheteroatom bond
formation. Application of these methodologies to the versatile synthesis
of unnatural amino acids, peptide macrocycles,[68,74–76] peptide func-
tionalized polymers,[73] and even proteins[69] is a powerful testament to
S C H E M E 2 3 Direct photocatalytic decarboxylative reduction of the robust nature of the coupling strategies. The majority of available
carboxylic acids. A, Phenanthrene (phen)/dicyanobenzene (DCB)- methods utilize photocatalytic and, in some cases, electrochemical
mediated CAH bond formation and B, CAD bond formation. C, approaches to convert carboxylic acids under mild conditions into the
Acridinium-mediated approach to CAH bond formation
corresponding peptide alkyl radicals following the extrusion of CO2.

coworkers in 2014 (Scheme 23C).[84] In this variation, decarboxylative


alkyl radical formation was followed by hydrogen-abstraction from an
aryl thiol generated in situ from bis(4-chlorophenyl)disulfide (DDDS)
133. The authors demonstrated the scope of the transformation on a
number of a-amino acids as well as a dipeptide substrate 130 (Scheme
23C).[84] Such methods provide an attractive alternative to conven-
tional Barton decarboxylation chemistry as they employ stable and
robust carboxylic acid starting materials (in contrast to the photosensi-
tivity of Barton esters) and avoid additional preactivation steps.

3.3.2 | CAO bond formation (via oxidative decarboxylation)


Under either electrochemical or chemical oxidation conditions, C-
terminal carboxylic acids may be efficiently converted into the corre-
sponding peptide N-acyl iminiums (e.g., 135, Scheme 24) following the
extrusion of CO2. In addition to serving as valuable intermediates en
route to Mannich alkylation products (see Scheme 21),[79,80] reactive
iminium species may be trapped with protic solvents (H2O, MeOH,
AcOH), to facilitate the formation of peptide N,O-acetals. Seebach and
coworkers demonstrated that the initial oxidative decarboxylation reac-
tion[85,86] is readily accomplished using Hofer-Moest electrolysis[87] by
employing a platinum anode under constant current and in the pres-
ence of tertiary amines for the in situ generation of the electrolyte.[85]
S C H E M E 2 4 Oxidative decarboxylation of peptide carboxylic
When reactions are performed in methanol or acetic acid, peptide N,O-
acids using A, anodic oxidation, or B, chemical oxidants, to afford
acetals 136-140 are readily formed (Scheme 24A). Notably, CAO bond
N,O-acetals via reactive N-acyliminium intermediate 135. C,
formation at the C-terminus occurred orthogonally to an unprotected Diverse peptide products formed following nucleophilic attack onto
side-chain glutamic acid residue, albeit in lower yield (137, 25%).[85] N,O-acetals
MALINS | 15 of 16

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DR. LARA MALINS completed her B.A. in chemis-
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cating to The University of Sydney to
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undertake her PhD with Professor Richard
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Payne on the development of new peptide liga-
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tion strategies. In 2015, Lara joined the labora-
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tory of Professor Phil Baran at The Scripps
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[66] H. Huang, K. Jia, Y. Chen, ACS Catal. 2016, 6, 4983. Research Fellow at the Research School of Chemistry at the Australian

[67] L. Chu, C. Ohta, Z. Zuo, D. W. MacMillan, J. Am. Chem. Soc. 2014, National University in November 2017.
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[68] S. J. McCarver, J. X. Qiao, J. Carpenter, R. M. Borzilleri, M. A. Poss,
How to cite this article: Malins LR. Decarboxylative couplings
M. D. Eastgate, M. M. Miller, D. W. MacMillan, Angew. Chem. Int.
Ed. 2017, 56, 728. as versatile tools for late-stage peptide modifications. Peptide
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[69] S. Bloom, C. Liu, D. K. Ko Science. 2018;e24049. https://doi.org/10.1002/pep2.24049
R. Ewing, D. W. C. MacMillan, Nat. Chem. 2018, 10, 205.

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