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DOI: 10.1002/pep2.24049
REVIEW
Lara R. Malins
KEYWORDS
cross-coupling, decarboxylation, peptide modification, transition-metal catalysis, unnatural amino
acids
1980s with Sir Derek Barton’s seminal work on the reactivity of amino
acid thiohydroxamate esters 1 (so-called “Barton esters,” see Scheme
2A).[17,18] Prior approaches to the decarboxylation of amino acids, pep-
tides, and proteins relied extensively on heat[19,20] or the intermediacy
of highly unstable acid derivatives (e.g., acyl hypobromites,[21] reminis-
cent of the Hunsdiecker-Borodin reaction). Readily formed from protei-
nogenic carboxylic acids (e.g., 2, Scheme 2A), however, Barton esters 1
are known to fragment under mild conditions in the presence of heat
or light, causing homolysis of the NAO bond and the extrusion of CO2
and 2-pyridylthiyl radical 4 to form an amino acid-derived alkyl radical
S C H E M E 1 Strategies for the modification of peptides via
intermediate 6 (Scheme 2B). This alkyl radical can engage in a number
decarboxylative couplings
of downstream pathways including reduction to the corresponding
decarboxylative transformations, this review focuses specifically on alkane 8 in the presence of a hydrogen atom donor, such as tBuSH, or
advances in decarboxylative couplings for the late-stage modification halogenation with CCl4 or BrCCl3 to afford the Hunsdiecker-Borodin
of native carboxylic acids within peptide substrates (defined here as product 9.[18,22] Giese-type radical addition to an electron deficient ole-
two or more amino acids). Where applicable, readers are referred to fin followed by incorporation of a pyridylsulfide unit at the a-position
relevant reviews and seminal papers underpinning the described trans- to the electron-withdrawing group affords amino acid derivatives such
formations. Herein, synthetic strategies are principally categorized by as 10 (Scheme 2A) .[23]
their use of activated esters (“redox-active esters”) (path A), or unpro- Importantly, Barton showed that transformations of this type were
tected carboxylic acids (path B), as substrates for the extrusion of CO2 amenable to the modification of both side-chain and a-carboxylic acids,
and downstream coupling reactions (Scheme 1). These discrete syn- although a-decarboxylation proved more facile owing to the relative
thetic pathways are further subdivided by the nature of the bond- stability of the a-amino radical formed following loss of CO2.[18] The
forming reaction (CAC bond formation or CAheteroatom bond forma- versatility of Barton esters for decarboxylative transformations on pep-
tion). The aim is to provide readers with a detailed guide to the growing tides was further demonstrated by their compatibility with solid-phase
array of accessible decarboxylative modifications as well as provide a peptide synthesis (SPPS). In 2001, Attardi and Taddei demonstrated
perspective on unmet challenges in the area. the solid-phase synthesis of peptide Barton esters followed by a light
induced Hunsdiecker-Borodin reaction on the resin-bound substrates
SCHEME 2 A, Barton esters as versatile substrates for decarboxylative couplings; B, Proposed radical mechanism
MALINS | 3 of 16
S C H E M E 3 A, Alternative esters capable of photolytic decarboxylation; B, Proposed mechanism of N-hydroxyphthalimide (NHPI) ester
fragmentation to afford alkyl radical 18; C, Representative products following decarboxylation and trapping of the radical intermediate
Okada et al. demonstrated the advantageous stability of the latter, carboxylic acids as a feasible entry point into conventional, metal-
which are readily prepared, easily isolable, and tolerant of aqueous catalyzed cross-couplings,[15,35,36] the Baran laboratory was first to
[26]
reaction media. Upon irradiation of phthalimide esters with visible report the use of activated carboxylic acids such as 22 as robust alkyl
light in the presence of a photosensitizer (e.g., PS, 13, Scheme 3B), sin-
gle electron transfer (SET) from the excited state of the photosensitizer
14 to ester 12 affords the phthalimide radical anion 15. Protonation
followed by homolysis of the weak NAO bond generates carboxyl radi-
cal 17 which spontaneously decarboxylates to afford carbon centered
radical 18. Okada and coworkers demonstrated that radical intermedi-
ate 18 can subsequently engage a variety of radical traps, including
tBuSH, CCl4, and various electron-deficient olefins to afford the corre-
sponding reduced alkanes 19,[26] chloroalkanes 20,[27] and Michael
adducts 21,[28] respectively (Scheme 3C). The ability to forge addition
products such as 21 is a notable advantage over the use of Barton
esters, whereby the intermediate radical formed following Michael
addition reacts preferentially with the Barton ester thiocarbonyl group
to form a-sulfide products such as 10 (see Scheme 2A).[23] In their
2012 second-generation synthesis of the diterpene (–)-aplyviolene,
Schnermann and Overmann masterfully employed an NHPI ester to
facilitate the decarboxylative addition of a tertiary radical to an
a,b-unsaturated ketone.[29] Carried out in the presence of light and
catalytic [Ru(bpy)3Cl2] in aqueous THF, this transformation provided
a mild and selective approach to radical formation and afforded the
target product without incorporation of the 2-pyridylthio group.
Decades after the initial disclosure of decarboxylative transforma-
tions using the versatile activated esters outlined in Schemes 2 and 3,
the synthetic utility of these venerable intermediates became a source
of renewed excitement, owing to the seminal work of several research
groups.[30–33] The pivotal realization—that carbon-centered radicals
(e.g., 18) formed through decarboxylation of activated alkyl esters can
engage in conventional cross-coupling pathways—markedly expanded
the retrosynthetic utility of carboxylic acid derivatives. Unlike conven-
tional metal-catalyzed CAC bond-forming reactions, which rely heavily
SCHEME 4 A, Application of “redox-active esters” in nickel-
on alkyl and aryl halides as starting electrophiles,[34] activated esters
catalyzed decarboxylative cross-couplings with arylzinc reagents; B,
are simple and readily accessible, serving as robust chemical feedstocks
Cross-electrophile coupling employing redox-active esters; C, Pro-
for a vast array of complexity-building reactions. Drawing on earlier posed catalytic cycle involving decarboxylative fragmentation of
studies which demonstrated the decarboxylative metalation of aryl radical anion 28 to form radical intermediate 29
4 of 16 | MALINS
coupling partners in metal-catalyzed CAC bond formation in early initial transmetalation of arylzinc reagent 23, forming the key ligated
[30]
2016 (Scheme 4A). The authors identified that the radical decarbox- aryl-Ni complex (Scheme 4C).[30] SET from the metal center to the
ylation of Barton esters could be triggered, at room temperature in the phthalimide ester 22-NHPI forms radical anion 28 which spontaneously
absence of light, through single-electron transfer (SET) from a suitable fragments, losing CO2, and forming alkyl radical 29. Recombination of
transition-metal complex (Scheme 4A). The transition metal catalyst (a the alkyl radical with the Ni complex followed by reductive elimination
ligated aryl-nickel complex formed from NiCl2, a bipyridine ligand, and forms the cross-coupled product 24, closing the catalytic cycle. The
arylzinc reagent 23) could also mediate downstream CAC bond forma- putative involvement of radical intermediates in this process was con-
[30]
tion, affording the valuable alkyl-aryl cross-coupled product 24. firmed through ring-opening of a carboxylic acid bearing a cyclopro-
The photosensitivity of Barton esters prompted a search for more pane unit.[30]
practical activated ester alternatives, or so-called redox-active esters Given the overlap between redox-active esters (RAEs) and the
(RAEs), also capable of accepting an electron from a suitable metal- intermediates formed using standard peptide coupling reagents, it is
catalyst. In addition to Okada’s priviledged phthalimide ester 22- perhaps unsurprising that RAEs have gradually emerged as powerful
NHPI,[26–28] and the related tetrachloro-variant 22-TCNHPI, N-hydrox- tools for the coupling of peptide-based alkyl carboxylic acids. In addi-
ybenzotriazole esters 22-HOBt and 22-HOAt—commonly employed in tion to a variety of nickel-catalyzed transformations,[30,37–42] concur-
[30]
peptide couplings—were also suitable substrates (Scheme 4A). Weix rent work has exploited Okada’s photoinduced fragmentation of
and coworkers independently reported a concurrent nickel-catalyzed phthalimide esters[26] for the decarboxylative arylation,[32,33,43] thiola-
decarboxylative cross-coupling of N-hydroxyphthalimide esters 25 with tion,[44] and selenation[45] of peptide substrates (vide infra). Despite a
[31]
aryl iodides 26 in the presence of zinc metal (Scheme 4B), serving as conceptual similarity to prior work on decarboxylative functionaliza-
a testament to the generality of such carboxylic acid derivatives as tions, the renewed impetus for the contemporary advancement of
robust alkyl radical precursors. Mechanistically, such reactions are RAE-mediated decarboxylative couplings stems largely from a growing
thought to proceed through a pathway similar to Okada’s photolytic demand for modified peptides from both academia and industry. New
decarboxylation (see Scheme 3B). In the absence of light and a photo- methods are additionally underpinned by an enhanced understanding
catalyst, however, the key electron-transfer step is thought to be medi- of transition-metal-catalyzed and photochemical processes, setting the
ated by the metal center. Baran and coworkers proposed that the stage for rapid and powerful additions to the repertoire of decarboxyla-
nickel-catalyzed arylzinc coupling (outlined in Scheme 4A) involves an tive functionalizations and allowing access to more diverse peptide
MALINS | 5 of 16
SCHEME 6 On-resin nickel-catalyzed decarboxylative alkyl-alkyl couplings employing peptide TCNHPI esters
products. Scheme 5 summarizes very recent methods—most reported protected allyl esters 30 which, following elongation of the target pep-
within the past 2 years—for peptide modifications which utilize RAEs, tide on the solid-phase, could be readily unmasked upon treatment
particularly phthalimide esters, as a starting point for the diverse decar- with Pd(PPh3)4 and phenylsilane. On-resin activation of peptide acids
boxylative functionalization of peptides. The following sections, subdi- was preferentially performed using excess DIC and tetrachloro-N-
vided by the nature of the bond-forming reaction, will discuss the hydroxyphthalimide (TCNHPI) 32 in the presence of DMAP at 378C.
scope and limitations of these methodologies. Treatment of the resin-bound RAE 33 with NiCl2glyme, ligand di-tert-
butylbipyridine, and various alkylzinc reagents then afforded modified
2.3 | CAC bond formation peptides 34-38, following simple washing steps and acidic cleavage from
the resin.[37]
Tools for CAC bond formation are paramount to building molecular
Conventional advantages associated with solid-phase chemistry—
complexity and are amongst the most oft-used strategies in drug dis-
the use of excess reagents (2 equiv. of the nickel/ligand complex, 20
covery.[46] Within the context of peptides, the decarboxylative cross-
equiv. of the alkylzinc reagent) and ease of purification—facilitated the
coupling of activated esters is quickly emerging as a powerful approach
rapid diversification of resin-bound substrates. Products derived from
to the targeted functionalization of peptides, given the relative stability
both side-chain (34 and 35) and a-carboxylic (36 and 37) acids were
and abundance of proteinogenic carboxylic acids and their ease of acti-
feasible, as was the dual-functionalization of Asp and Glu (38). Side-
vation. The following sections outline metal-catalyzed and photochemi-
chain modifications proceeded with complete retention of a-chirality,
cal cross-couplings of peptidic alkyl carboxylic acid derivatives with
affording homogeneous peptide products with valuable synthetic han-
C(sp3)-, C(sp2)-, and C(sp)-hybridized coupling partners.
dles including alkenes. While transformations generally occurred in
3 3 good yields based on the original resin-loading, byproducts associated
2.3.1 | C(sp )AC(sp ) coupling
with hydrolysis of the activated ester, net reduction via a
Alkylation
decarboxylation-hydrogen-atom abstraction pathway, and aspartimide
Shortly after demonstrating the feasibility of nickel-catalyzed decarbox-
or glutimide formation following side-chain activation account for the
ylative arylations on small-molecule substrates, the Baran laboratory
mass-balance.[37] Strategies to reduce byproduct formation would sim-
reported in 2016 a robust method for the decarboxylative alkylation of
plify iterative couplings, ideally allowing for the robust incorporation of
resin-bound peptide-RAEs with alkylzinc reagents (Scheme 6).[37] Tak-
two or more discrete unnatural variants.
ing advantage of the similarities between RAEs and standard peptide
coupling reagents for amide-bond formation, this solid-phase approach Giese reaction
to CAC bond formation utilized peptides forged under standard Fmoc- Drawing from the early successes of Barton[23] and Okada[28] on decar-
solid-phase peptide synthesis (SPPS) conditions on Rink amide resin. boxylative Giese reactions, Baran and coworkers extended their suite
The target carboxylic acids 31 were incorporated as orthogonally of on-resin, nickel-catalyzed RAE modifications to include reactions
6 of 16 | MALINS
S C H E M E 7 Decarboxylative Giese reactions employing peptide NHPI esters. A, Resin-bound carboxylic acid; B, Resin-bound acrylamide
acceptor; C, Solution-phase macrocyclization via an intramolecular Giese reaction
with electron-deficient alkenes (Scheme 7A).[40] Following activation as LiCl, and Zn powder to afford modified peptides 40 and 41, respec-
the corresponding NHPI-ester, resin-bound acid 39 could be coupled tively. Alternatively, solid-supported alkene 43 could be coupled with
with phenylvinylsulfone or acrylonitrile in the presence of Ni(acac)2, an excess of proline-derived RAE 42 to afford peptide 44 incorporating
a g-amino acid (Scheme 7B). Finally, bifunctional peptide 46, bearing an
NHPI ester and a Lys-linked acrylamide moiety could engage in a
solution-phase, intramolecular Giese reaction, forming the structurally
intriguing macrocycle 47 as a mixture of diastereomers at the Pro
a-position (Scheme 7C).[40]
Alkynylation
A conceptually similar approach to C(sp3)–C(sp) couplings was accom-
plished by Baran and coworkers, through the cross-coupling of
peptide-NHPI ester 58 with ethynylzinc chloride 61 to afford the cov-
eted alkyne moiety (Scheme 10).[39] As expected, terminal alkyne 62
was a suitable substrate for the copper-catalyzed azide-alkyne cycload-
dition (CuAAc) reaction with benzyl azide to afford the corresponding
triazole product. The importance of alkynylated peptide targets for bio-
conjugation[11,12,51] and recent strategies for peptide macrocycliza-
SCHEME 11 CITU 63 as a versatile activating agent for one-pot,
tion[47,52] render this particular methodology a prominent addition to nickel-catalyzed decarboxylative cross-couplings with alkyl, alkenyl
the toolbox of late-stage peptide modifications. An alternative, and alkynyl zinc reagents
8 of 16 | MALINS
SCHEME 15 Overview of strategies for the direct decarboxylative coupling of peptide carboxylic acids
10 of 16 | MALINS
S C H E M E 1 6 Iridium-mediated photocatalytic decarboxylative Giese reactions employing unprotected carboxylic acids. A, Intermolecular
Giese reaction; B, an intramolecular Giese approach to peptide macrocyclization
not yet been fully vetted on the entire suite of proteinogenic amino it allows for the functionalization of native carboxylic acids without the
acids. Frequent use of reactive organozinc reagents (which typically need for preactivation through RAE formation. Contemporary strat-
require fresh preparation) may limit compatibility with unprotected resi- egies for direct couplings rely heavily on photo-induced electron trans-
dues. It is therefore envisioned that the extension of RAE-mediated fer (PET) as a means of mildly and selectively triggering the
decarboxylative couplings in the future will focus on the application of decarboxylative fragmentation of an unprotected acid (Scheme 14).[62]
[59]
readily accessible and benign coupling partners, such as boronic acids Upon irradiation with light, a suitable photocatalyst (traditionally a
[33]
or unfunctionalized arenes and heteroarenes via direct CAH cou- high-value iridium or ruthenium-based complex) can accept photons to
plings. Promising methods that have thus far only been demonstrated on generate an excited state complex which is highly oxidizing. Deproto-
single amino acids, including H. Fu’s thiophenol-catalyzed decarboxyla- nation of the starting carboxylic acid, followed by single-electron oxida-
tive amination strategy[43] (see section 2.3.2), an approach to substituted tion—the transfer of an electron from the carboxylate 79 to the excited
peptide alkynes using alkynyl sulfones,[60] and a recent decarboxylative photocatalyst—forms a carboxyl radical 80. Spontaneous fragmentation
silylation manifold,[61] may also serve as important proof-of-concept leads to the loss of CO2 and formation of radical 18, analogous to that
studies for the development of new peptide-based methods. Given the produced following RAE fragmentation and now poised for subsequent
simplicity of routine solid-phase peptide synthesis using various auto-
functionalization (see Scheme 14 for a representative example). Devel-
mated platforms, it is further envisaged that the adoption of decarboxy-
opments in photocatalytic systems have enabled access to alkyl radicals
lative transformations would greatly benefit from the development and
using a variety of alternative photosensitizers and under various reac-
optimization of new strategies amenable to automation.
tions conditions.[63] Importantly, amino acid alkyl radicals generated in
this manner are also known to engage readily with suitable radical traps
3 | DIRECT DECARBOXYLATION OF or to be intercepted by standard transition-metal-catalyzed cross-cou-
CARBOXYLIC ACIDS
pling cycles,[63–66] setting the stage for downstream diversification.
Other intriguing approaches to the direct functionalization of
3.1 | Background
native peptide a-carboxylic acids include chemical and electrochemical
In addressing the limitations of RAE-mediated couplings, direct decar- oxidative decarboxylations (see Scheme 24, vide infra). While often not
boxylation is an attractive approach to the modification of peptides as classified as conventional “coupling” reactions, such oxidative
MALINS | 11 of 16
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