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of nitrate assimilation. These include to other organisms which use nitrate as the
pharmacological, immunological, molecular major source of nitrogen nutrient.
genetics (identification of regulatory genes
and mutants), functional genomics, Materials and Methods
recombinant DNA technology, transgenic
plants, as well as use of specific enzyme Growth Conditions
inhibitors (Stitt, 1999). In the present study Rice seeds Oryza sativa var. Panvel I) were
one inhibitor, tungstate has been used to washed thoroughly with tap and single distilled
study the regulation of nitrate reductase and water (sd/w), soaked for 10 minutes in 5% v/v
nitrite reductase in the excised leaves of sodium hypochlorite (NaOCl) and were washed
nutrient-starved rice seedlings. Rice (Oryza several times with tap water. The seeds were
again washed and soaked in sd/w and kept in dark
sativa ssp. indica var. Panvel I) was a
for two days. Imbibed seeds were plated on wet
selected to study the regulation of nitrate germination paper in a plastic tray and incubated
assimilation because of paucity of the at 25+2 °C under white light illumination derived
available literature in this field. Rice is also from 2 Osram 36 W fluorescent lamps. The light
known to be very poor in nitrogen use intensity at the plant level was 1 Klux. The
efficiency; as it uses only ~33% of nitrogen seedlings were watered daily with sd/w for 10-12
fertilizer applied to the crop resulting in days. To prevent interferences by nitrate uptake
heavy loss of nitrogen. This, in turn, results in and long distance transport processes with nitrate
drinking water pollution due to leaching of reduction, most of the experiments were carried
nitrate. out with detached leaves.
Induction of NR by nitrate
Induction is defined as an increase in enzyme
Sodium tungstate, an analog of
activity above the endogenous level (Aslam et al.,
molybdenum, inhibits nitrate reductase and 1973). 10-12 days old seedlings were selected for
methionine sulfoximine inhibits glutamine studying the induction of the enzymes by nitrate
synthetase. Tungstate can be substituted for as maximum NR activity was observed in this
molybdenum in the molybdenum cofactor of period as well as there were no phenotypical
nitrate reductase, resulting in inactive enzyme stress symptoms like wilting and chlorosis. The
(Deng et al., 1989). Because of its broad seedlings were grown hydroponically (nutrient
biological spectrum of action, tungstate may starved) in order to avoid any kind of metabolic
be used to selectively prevent nitrate changes contributed by nutrient molecules in the
reduction. It will be possible to examine the system. Excised leaves were floated on different
regulation of nitrate uptake and of other steps concentration of nitrate (20-100 mM) in a Petri
of the nitrate assimilation pathway in higher dish. After 4 hours, leaves were washed to
prevent carry over of chemicals, blotted on a
plants without the complications introduced
tissue paper, wrapped in foil, frozen in liquid N
by the functioning of the pathway. The results 2
indicate that even a very low concentration of and used immediately or stored at –70° C.
tungstate (0.1mM) is enough to cause severe
loss in the activity of nitrate reductase and the Treatment of Tungsate
extent of inhibition did not increase with To study the behavioral pattern of enzymes from
nutrient starved seedlings, excised leaves were
increasing concentrations. The findings of the
treated with specific enzyme, inhibitors Sodium
present study clearly indicate that light and tungstate (0.5 and 1.0 mM) with or without nitrate
nitrate play a significant role in the regulation and downstream metabolites. After appropriate
of nitrate reductase and the regulation of time intervals leaves were washed, blotted on
nitrate assimilatory enzymes in rice is similar tissue paper, wrapped in foil, frozen in liquid N2
and used immediately or stored at –70° C.
Research Dimensions January 2011
hairpin and dimer formation using software distilled water as a control in light. After 6
available on the internet hrs, the leaves were frozen and processed for
(www.premierbiosoft.com). The sense and extraction and NR assays. The data presented
antisense primer sequences of NR: in Fig. 1 show that 40 mM KNO3 was the
AGGGGATGATGAACAACTGC and
optimum nitrate concentration for maximum
GAGTTGTCGGAGCTGTACCC. Tubulin sense
and antisense primer sequences are
NR induction in excised leaves. This
TGAGGTTTGATGGTGCTCTG and concentration of nitrate was used for all
GTAGTTGATGCCGCACTTGA. The target subsequent experiments.
gene transcript was amplified using one-step RT- When NR activity was measured from
PCR kit supplied by QIAGEN (Germany), dark-adapted leaves treated with nitrate (40
according to the supplier’s instructions. One mM) in dark for 6 hrs, it decreased to 15%
microgram template and 0.6 mM each of both the compared to that in presence of light (Fig. 2).
primers (forward and reverse) were added into a It can also be seen from the Fig. 2 that in the
50 ml reaction mixture containing 5_ RT-PCR absence of nitrate, there was no difference in
buffer, 5X Q solution, dNTPs and enzyme mix. the levels of NR activities between light and
RNase inhibitor (4 units/reaction) was also added
dark conditions.
into the reaction mixture. Tubulin was used as a 60
housekeeping control. Cycling conditions were
50
optimised to give a linear relationship between
Specific Activity
the template used and product formed. Reverse 40
80
the form of Histogram.
60
Results 40
Nitrate induction
20
40
36 hrs (Light) 27.57
30 48 hrs (Dark) 6.84
48 hrs (Light) 33.9
20
120
0
Control Nitrate
100
(B) (C)
R e la tiv e S p . A c . (% )
of NR in the dark (Kaiser and Huber, 1994; leaves was much higher in the light than in
MacKintosh, 1998; Scheible et al., 1997b). the dark. Besides, NR transcript was detected
As a result, the rate of nitrate reduction falls from the dark-adapted leaves even in the
several folds in the second part of the light absence of nitrate and light under conditions
period, and is negligible during the night when no NR activity could be detected.
(Matt et al., 2001). Changes of the cytosolic Hence it appears that though NR transcription
NADH concentration might also affect in vivo was not dependent on the presence of light,
NR activity (Kaiser et al., 2000). NR activity was stimulated to a far greater
When plants are grown in day/night extent by light. It has been reported by other
conditions, the increase in total NR activity groups of workers in other plants that light
during the first 3 h of the photoperiod and nitrate had cumulative effects on NR
indicates that the translation of NR is mRNA levels (Vincentz et al., 1993).
stimulated by light. The possibility that the However in the present study, it was observed
activity increased in the light due to higher that light did not further enhance the NR
stability of the NR protein has previously mRNA expression already induced by nitrate.
been ruled out for N. plumbaginifolia (Lillo et This difference can be attributed to the nitrate
al., 2003). Light stimulation of the starved conditions in which the rice seedlings
translational process is therefore the most were grown. It appears that post-
likely explanation. transcriptional effect of light is a major factor
It has been shown earlier that in plants grown in controlling the level of NR. A similar kind
in light and in the presence of nitrate, the of NR regulation has been shown in N.
levels of mRNA, proteins and NR and NiR plumbaginifolia transgenic plants expressing
activities decreases slowly after 2 days in NR gene under the control of a constitutive
darkness. When such plants are returned to 35S promoter (35S-NR) (Vincentz et al.,
light, the mRNAs of NR and NiR are rapidly 1993). There was a significant reduction in
reinduced to their maximum level after 4 to 6 both protein and NR activity in the dark
hrs. This process is independent of whereas the level of mRNA remained
phytochrome (Faure et al., 2001). In the comparable to that observed for plants
present study NR activity reached to the basal exposed to light. Both protein level and NR
level after 12 hrs in darkness probably activity were reinduced totally when the
because plants were not supplied with plants were reexposed to light and partially
nitrogen source as well as any other nutrient. when the plants remained in the dark and
When nitrate was supplied to these dark- received sucrose. This post-transcriptional
adapted leaves in the presence of light, NR effect can be explained by modifications in
and NiR activities increased to 20 and 3-fold the capability of mRNA to be translated, in
respectively. the stability of protein, or in the inactivation
of the enzyme by phosphorylation.
A comparison of steady state NR
mRNA levels revealed statistically significant Tungstate can be substituted for
increases in mRNA both in the light and dark. molybdenum in the molybdenum cofactor of
The extent of increase in the mRNA level nitrate reductase, resulting in inactive enzyme
(~40 %) in the presence of nitrate as (Deng et al., 1989). In the presence of
compared to water control was similar in tungstate, NR protein is still synthesized, but
light and dark. However, when NR activities the NADH‐nitrate reducing activity is
were compared, it was found that difference defective. Since treatment of plants with
between water control and nitrate treated tungstate inhibits the formation of new active
Research Dimensions January 2011