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103
B06 Lab Report Huayi Zhao
Recipes
BIBC 103
B06 Lab Report Huayi Zhao
MAPK Lysis Buffer
• 1% NP-40
• 20mM HEPES, pH 7
• 15mM EGTA
• 150mM NaCl
Inhibitor Cocktail (10x)
• 2mM Pefabloc
• 10mug/ml pepstatin
• 100mM beta-glycerophosphate
• 4mM NaF
• 2mM Na3VO4
Result:
1) Treatment of Sea urchin Table
Group Sample Experimental Treatment Percent Percent
Condition (Per ml of Activation post-
eggs) (%) cleavage
(%)
1 1 Seawater None 0 0
2 Fertilized Add 1mul 88 71
sperm
2 3 5mM A23187 Add 5mul 94 0
of 1mM
stock in
DMSO
4 DMSO Add 5mul 0 0
DMSO
3 5 Seawater None 0 0
6 Fertilized Add 1mul 95.4 92.5
sperm
4 7 5mM A23187 Add 5mul 90.3 0
BIBC 103
B06 Lab Report Huayi Zhao
of 1mM
stock in
DMSO
8 DMSO Add 5mul 0 0
DMSO
5 9 Seawater None 0 0
10 Fertilized Add 1mul 92 72.5
sperm
6 11 5mM A23187 Add 5mul 60 0
of 1mM
stock in
DMSO
12 DMSO Add 5mul 0 0
DMSO
7 13 Seawater None 0 0
14 Fertilized Add 1mul 100 95
sperm
8 15 5mM A23187 Add 5mul 86 0
of 1mM
stock in
DMSO
16 DMSO Add 5mul 0 0
DMSO
A21387 (ionophore)
• A compound that facilitates diffusion of an ion across cell membranes
• Lipid soluble molecules that enter the membrane and allow calcium to
move across the membrane down its concentration gradient.
• Dissolved in DMSO as a 1mM stock
BIBC 103
B06 Lab Report Huayi Zhao
To answer question 1, we can see from the percent activation and percent post-cleavage
where A23187 treatment and sperm treatment of the sea urchin egg can lead to a very
high percentage of activation but only sperm can make the eggs achieve post-cleavage
while all other treatment cannot. Therefore, we can conclude that cytoplasmic calcium
influx is not sufficient to produce cell division in an unfertilized egg.
2) Western Blot:
To determine the band intensity of activated MAPK and total MAPK present
in the sample to determine whether inhibition of MAPK is done through
dephosphyrlation or degradation.
The Western blow is done to determine the presence of total MAPK vs. P-MAPK after
each treatment. A stronger band indicates a much bigger concentration of MAPK.
Difference in band can tell us the effect of calcium influx on MAPK inactivation
compared to control. We will answer the third question first from the Western Blot. As
we can see from Gel A, which is our only good, visible lanes gel. A visible lane can be
observed at the A23187 treatment and DMSO but not a visible lane for fertilized egg.
This can indicate that at fertilization, P-MAP kinase is no present while with only an
influx of calcium (treatment with A23187), it is clear that P-MAPK is still present in the
zygote, which might explain the 0% cleavage percent in all A23187 treatment. Therefore
we can conclude that a calcium influx is not sufficient to inactivate MAPK in sea urchin
eggs as we can see from the anti-P-MAPK gel. However, we cannot conclude that MAPK
is inactivated by degradation as the gels for total-MAPK is not clearly visible.
3) ELISA:
ELISA Standard and Sample Table:
(See Next Page)
BIBC 103
B06 Lab Report Huayi Zhao
1.2
1
0.8 Standard IP1
0.6 Poly. (Standard IP1)
0.4
0.2
y = 0.1285x3 - 0.6919x2 + 0.2167x + 2.1792
0 R² = 0.99576
-0.2 0 1 2 3 4
Log10 of Protein Concentration
BIBC 103
B06 Lab Report Huayi Zhao
3.5
3
2.5
2 Standard reversed
1.5
y = -1.4345x3 + 4.2521x2 - 4.6339x + 3.671 Poly. (Standard reversed)
1 R² = 0.99007 Poly. (Standard reversed)
0.5
0
0 0.5 1 1.5 2
Absorbance @ 450nm
BIBC 103
B06 Lab Report Huayi Zhao
2000
1500
DMSO
1000
500 Seawater Seawater
Fertilized A23187
0 Fertilized
-500
A23187
-1000
-1500 DMSO
Sample
Seawater 227.7305114
Fertilized 39.46179628
A23187 54.49739393
DMSO 825.6091533
500
400 DMSO
300 Fertilized A23187
200 Seawater Seawater
100
0 Fertilized
-100
sample
A23187
Seawater 99.531202
DMSO
Fertilized 138.8111372
A23187 185.746102
DMSO 243.6874851
BIBC 103
B06 Lab Report Huayi Zhao
From the ELISA data, we can see that at fertilization, the PLC pathway is activated due
to ligand receptors on the cell membrane and a treatment of A23187, which causes a
cellular Ca2+ influx also activates PLC pathway. However, there is an inconsistency with
the DMSO treatment, causing the data to be relatively much higher than that of other
treatment. This might happen because of the misreading or possible contamination during
the loading process onto the 96-well plate.
Discussion:
The result we obtained from experimental data is that calcium influx is sufficient
to induce sea urchin egg activation but not fertilization. It is also clear from the Western
Blot that Ca2+ influx is also not sufficient enough to induce MAPK inactivation. We
were unable to determine whether MAPK inactivation is caused by dephosphyrlation or
degradation. These results do comply with our expectation in that we understand
activation of eggs can be obtained through multiple pathways such as PLC and other
while fertilization only happens due to sperm releasing specific nucleus into eggs to
induce cellular mitosis.
My conclusion that calcium influx is not sufficient is not consistent with the result
of the experiment conducted by David J.Caroll’s experiment in which he states that
calcium influx insufficient to inactivate MAPK (The Relationship between Calcium,
MAP Kinase, and DNA Synthesis in the Sea Urchin Egg at Fertilization). Another
experiment that can be designed to determine the necessity of the Calcium influx would
be to treat 2-egg lysate sample with 10muM U0126 (a MEK inhibitor) (1,4-diamino-2, 3-
dicyano-1, 4bis[2-aminophenylthio] butadiene; Promega) to stop the phosphorylation of
the MAPK. Then one sample is introduced to 1.7 muM free Ca2+; we then observe the
resulting P-MAPK concentration comparing to the sample with only MEK inhibitor
treatment. Then we can determine the necessity of the Ca2+ influx.
One possible flaw in our experiment is that during the running of Western Blot,
there is no method for us to ensure the integrity of our MAPK during lysis. It is possible
that we can denature the protein into single units, causing the gel to have multiple bands
within one lane, decreasing band intensity, creating an under-estimation of MAPK
BIBC 103
B06 Lab Report Huayi Zhao
concentration. A way to solve this is to add reagent that is able to protect the MAPK from
the lysis buffer. Another factor that is not controlled is the binding specificity of the
secondary antibody directly to IP1; this can cause a difference in absorbance, leading to
false data. A way to solve it is to have a control with only IP1 conjugate and IP1-
peroxidase and the secondary antibody as a control.
Reference
Maya Kumano,*, † David J. Carroll,‡ John M. Denu,§ and Kathy R. Foltz*,1 (2006)
Calcium-Mediated Inactivation of the MAP Kinase Pathway in Sea Urchin Eggs at
Fertilization 236, 244–257