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Haploids in Genetic and Cytogenetical Research

S. Georgiev

To cite this article: S. Georgiev (2008) Haploids in Genetic and Cytogenetical


Research, Biotechnology & Biotechnological Equipment, 22:2, 644-651, DOI:
10.1080/13102818.2008.10817528

To link to this article: https://doi.org/10.1080/13102818.2008.10817528

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Published online: 15 Apr 2014.

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HAPLOIDS IN GENETIC AND CYTOGENETICAL RESEARCH


S. Georgiev
Sofia University, Faculty of Biology, Department of Genetics, Sofia, Bulgaria
Correspondence to: Sevdalin Georgiev
E-mail: georgievs@biofac.uni-sofia.bg

ABSTRACT
The aim of this review is to summarize our current understanding of the meiotic behaviour of chromosomes in haploids and
polyhaploids and to try to elucidate some aspects of chromosome pairing in haplo- and polyhaploids during meiotic division.

Keywords: euhaploids, aneuhaploids, haploidy, monoploids, of quantitative trait loci (7, 17). The DH are completely
Zea mays, Hordeum vulgare, nulisomic haploids, disomic homozygous at every locus, since haploids have only one allele
haploids per locus, they are useful for linkage mapping and studies of
the genetical control of chromosome pairing.
Introduction Despite the great importance of haploids, no book is
Since the first report of haploidy in Datura stramonium currently available that gives an adequate coverage to basic
(2), this phenomenon has been found among numerous aspects and application of haploidy in various facets of
other plant species. A large number of haploids have been biological research.
produced in cereal crops including wheat (22, 23, 24, 25, The purpose of this article is to review mainly the recent
28, 47, 48,). Spontaneously and induced haploidy were literature on haploids and to discuss their possible use in
reported in several animal species, including Drosophila, genetic and cytogenetical research.
salamander, frog, mouse and chicken. Usually haploidy in Satisfactory classification of haploids for the first time
animals produces physiologically abnormal individuals that has been suggested by Kimber and Riley (31). According
die during embryogenesis. In certain insects (Hymenoptera: this classification haploids are divided into two broad groups,
honeybees, wasps, etc.) haploid is part of the sex-determination euhaploids and aneuhaploids. A euhaploid may possess either
system. Haploids with gametic chromosome complements, the basic chromosome number itself or an exact multiple
offer excellent opportunities for the investigation of many of it, depending upon the ploidy level of the species from
fundamental problems concerned with genetics, cytogenetics which it is derived. If a plant with the gametic chromosome
and genomics. The study of haploids has helped considerably number is produced from a diploid species it may be known
in our understanding of the cytogenetic structure and evolution either as a monoploid or simply as a haploid (Fig. 1A-C).
of several plant species (25). On the other hand if it is derived from a polyploid species
Doubled haploids (DH, plants or animals with chromosome the term polyhaploid is used. The cytogenetic constitution
doubling of haploids) also are particularly useful in the genetic of a polyhaploid depends upon the nature of the polyploid
improvement of trees which have very long generation cycles species from which it originates. Therefore it is important to
and hence production of homozygous lines by continuous distinguish between polyhaploids derived from autopolyploids
inbreeding in them. The DH-derived homozygous populations species (autopolyhaploids) and those from allopolyploid
could be usefully in genetic studies, particularly in elucidating species (allopolyhaploids). Unlike euhaploids, aneuhaploids
the genetic control of traits by recessive alleles and analysis possess chromosome numbers that differ from the haploid

Fig. 1. A-C. Haploid cells of Zea mays L. (56)


644 BIOTECHNOL. & BIOTECHNOL. EQ. 22/2008/2
number by one or more chromosomes. They possessed extra character was incapable to produce any phenotypic effect in a
chromosomes or may be deficient for chromosomes, relative single dose. In contrast Subrahmanyan and Kasha (53) found
to the euhaploid condition (Fig. 2). that in barley the eight recessive marker genes were expressed
Furthermore the extra chromosomes may be members of in monoploid progeny.
the gametic set of the species (disomic haploids) or they may be For the study of gene dosage effects with incomplete
alien (from a different species or genus) – additional haploids. dominance autopolyhaploids and their somatically induced
Haploids deficient for one chromosome of the normal gametic polyploids also offer good possibilities. For example assuming
complement of the species are known as nullisomic haploids no locus alteration during evolution of a parental autotetraploid,
and those having one or more alien chromosomes substituted autopolyhaploid progeny with genotypes AA, Aa and aa and
for one or more chromosomes of the haploid complement are their somatically induced tetraploids (AAAA, AAaa, aaaa)
known as substitution haploids. Misdivision haploids possess would allow for critical analysis of the dosage effect.
telocentric or misdivision derivatives (isochromosomes) of Genetic analysis in autotetraploids is more complex than in
some chromosomes. diploids since they exhibit tetrasomic inheritance (6, 19). Their
autopolyhaploid derivatives may thus be expected to show
Haploids and genetic analyses disomic inheritance (25). Thus the use of autopolyhaploids
Haploids (haploid from the Greek word for “single”) and their may simplify the complexities involved in the genetic analysis
homozygous diploid derivatives represent perfect materials of autotetraploid species. The inherent genetic variability
for the study of many genetic problems, but the successful of autotetraploid species after inbreeding comes to express
utilization of haploids in genetic research depends not only much slower rate that of diploid species (44). Thus their
the efficient production of large numbers of haploids but also autopolyhaploid derivatives which are at the diploid level,
on the availability of reliable techniques for the production of may offer a faster means of testing and utilizing the genetic
chromosomally doubled and genetically stable derivatives. The variability in autotetraploid species. Such information would
monoploid plant sporophyte provides a unique opportunity to be of special interest for plant breeding programms.
study the expression of a single allele and its dosage effect Haploidy provides an opportunity to study the effect of
on plant physiology and morphogenesis. Lindstrom and Koos different levels of ploidy on vigour and productivity. Such
(34) showed that the recessive gene (p) for pubescent fruit studies will be useful in determining the optimum level of

Fig. 2. Classification of Haploids (51)


BIOTECHNOL. & BIOTECHNOL. EQ. 22/2008/2 645
ploidy for the maximum expression of desired characteristics. plants offer possibilities for improved and highly efficient
The fact that triploid sugar beets yield more sugar per acre than methods for the induction and selection of mutations and thus
diploids or tetraploids is an example of an application of such for the analysis of genetic fine structure in eucaryotes.
knowledge in plant breeding research (5). The phenomenon of transgenosis (gene transfer) provides
In monopliods, since each chromosome is represented only new possibilities for investigating various problems concerned
once, the occurrence of mutations can be readily detected. with prokaryote-eukaryote gene interaction and control
Thus the study of monoploids and homozygous diploids mechanisms involved in their expression (28). More studies
derived from them may be useful in determining the rates in this area may provide a powerful tool to plant breeders for
of spontaneous and induced mutations. Studies on haploids transferring defined genetic material into crop plants.
and their diploid derivatives have led to the detection of Polyhaploids also offers an excellent example to investigate
genetic factors controlling phenomena such as apomixis, the evolution in many plants, thus they can be used as a tool to
meiotic behaviour, pollen production and fertility (35). In a elucidate the mechanism of evolution in cereals (25).
vegetatively propagated monoploid cultivar of Pelargonium From the above discussion it is clear that the potentialities
(n=9), Daker (13) observed a low frequency of bivalents and a of haplods as tools in genetic research are numerous.
preponderance of neocentric univalents. However, in contrast
with expectations, microsporogenesis in the colchicine doubled Haploids in Cytogenetical Studies
haploids was very erratic and pairing was never complete.
Mitotic Studies
Dyads were the major products which were observed in
Chromosome numbers have been studied in haploids and
meiosis.
polyhaploids of a number of species (13, 20, 23, 29, 33,
Monoploids have been found suitable for studding the 37, 49, 56). These studies are important for two reasons:
influence of alien cytoplasm on meiotic behaviour and the i) in the first place, since each homologue is represented
expression of both qualitative and quantitative characters. only once in haploids, the task of matching homologues in
Sadasivaiah and Kasha (50), comparing Hordeum vulgare karyotype analysis is eliminated. This is especially true of
monoploids carrying vulgare and H. bulbosum cytoplasm, polyhaploids, where the lower chromosome number provides
respectively, observed no difference in meiotic behaviour, an added advantage in karyotype studies and ii) secondly, the
but found detectable effects of bulbosum cytoplasm on the identification of chromosomes, especially in aneuhaploids,
expression of morphological traits. Plants with bulbosum will be extremely useful in determining the genetic influence
cytoplasm tended to be more prostrate, shorter, later heading and exerted by chromosomes on the meiotic behaviour of the
maturing, lower yielding and more sensitive to environmental individuals concerned.
stress than those with vulgare cytoplasm.
Apart from the study of somatic chromosomes, the study of
The homozygous diploid derivatives of haploids can be the mitotic cycle in haploids are of considerable interest with
used as genetic constants in many types of laboratory and field regard to possible genomic effects – Genome size and genome
experiments to measure the variation due to environmental structure. It is well known that in higher plants interphase
effects (35). nuclear volume and minimum mitotic cycle time are linearly
The great numbers of discovery that haploids could be correlated (58).
produced at will, in many crop plants (22, 23, 24, 25, 26, 27, 28,
42, 47, 48, 54,), has determined the interest in the utilization of Meiotic Studies
haploids in various genetic studies. However, despite the rapid The study of chromosome pairing in monoploids is important
progress achieved in the production of haploids, their actual since in this case each chromosome usually lacks its normal
use in genetic research has not generally proceeded beyond homologous partner and pairing affinities.
the determination of simple genetic ratios (4, 9, 40). However, Monoploids of a number of species have been reported in
Collins, Legg and Kasperbauer (10), from an extensive study the literature (27, 31, 32, 35). However, in most of the earlier
of alkaloid content of several allopolyhaploids and tetraploid monoploid studies, observation on meiotic chromosome
forms in tobacco (Nicotiana tabacum), have demonstrated the behaviour are largely restricted to diakinesis and later stages
suitability of allopolyhaploids for the study of genetic control of meiosis, and very little attention has been given to the study
of plant chemistry. of prophase pairing. In this regard, a generalized description
With improving the techniques of isolation and induced of monoploid meiosis based on results obtained from recent
fusion of plant protoplasts have opened new avenues for studies may be helpful towards a clearer interpretation of the
genetic analysis and the study of genetic regulation. Fusion various chromosome configurations observed in monoploid
of plant protoplasts as a means of circumventing the sexual meiosis.
cycle to produce interspecific and intergeneric hybrids, will be The earliest meiotic stage at which the pairing properties
of great interest in the study of phylogenetic relationships and of non-homologous chromosomes may be critically studied in
gene transfer between widely divergent groups of plant species. monoploids is pachytene.
Isolated haploid protoplasts and their regeneration into entire

646 BIOTECHNOL. & BIOTECHNOL. EQ. 22/2008/2


Pachytene (from the Greek for “thick”) begins at the were similar in nature to those formed in their corresponding
completion of synapsis when homologous chromosomes are diploid species.
united along their length. The pairing properties between non- Diplotene (from the Greek for “twofold” or “double”) is
homologous chromosomes at this stage are not the same in signalled by the gradual dissolution of the synaptonemal zipper
monoploids derived from different plant species. In rice Chu complex and a slight separation of regions of the homologous
(8) observed an occasional pairing between parts of some non- chromosomes. This is ideal stage for the study of chiasmata, if
homologous chromosomes. Pairing within single univalent these exist between non-homologously paired chromosomes.
(foldback pairing) has also been observed in monoploids of In majority of haploids reported, practically no attention has
maize a (15, 57, 59). In barley monioploids derived from been given to this stage. However, in barley monoploids,
interspecific crosses between H. bulbosum (2n=14) and H. Sadasivaiah and Kasha (49) observed up to four chiasma-
vulgare (2n=14), Symko (55), observed a completed lack of like configurations in some bivalent-like structures found at
pairing at pachytene. In contrast Sadasivaiah and Kasha, (50), diplotene (Figs. 6 and 7). The occasional association of more
observed a very high degree of non-homologous pairing in two than two chromosomes was also observed at this stage.
types of barley monoploids, obtained from reciprocal crosses
between H. vulgare and H. bulbosum (Figs. 3-5).

Figs. 3-5. Meiosis in barley haploids. Mid-pachytene stages showing non-


homologous pairing. (Reproduced from 50).
From the above discussion it is clear that the obtained
results are rather controversial, probably due to a failure to
achieve a good spread of pachytene chromosomes required
Figs. 6-11. Meiosis in barley haploids. Diplotene and Diakinesis. Fig. 10.
for an accurate analysis. It is important to note that in many Diakinesis with two bivalent-like and one trivalent. Fig. 11. Diakinesis with
haploid plants (intergeneric hybrids of grasses) there is a very one ring univalent-like, one bivalente-like and one quadrivalent-like structures.
little chromosome pairing (61). It is possible that lack of pairing (Reproduced from 50).
may be a prerequisite for the occurrence of meiotic restitution Diakinesis (from Greek for “double movement”) is
and hence chromosome doubling (24). accompanied by further condensation of the chromatids.
The introduction of electron microscopy and new At this stage chromosomes occur mostly as univalents (56).
fluorescent techniques to biological research has opened a new However, associations of two or more, resulting in bivalent-
approach to studies of pairing. The synaptonemal complex, a like and multivalent-like configurations have been observed in
structure found when homologous chromosomes are involved many monoploids (51). Sadasivaiah and Kasha (50) observed
in meiotic pairing, has been reported in monoploids of tomato univalents and bivalent-trivalent- and quadrivalent-like
(38), maize (57), wheat (24). These synaptonemal complexes configurations in barley (Figs. 8-11).

BIOTECHNOL. & BIOTECHNOL. EQ. 22/2008/2 647


Metaphase I. The most striking phenomena observed at this africanum and Ricinus communis (62). In addition to bivalents,
stage are the lack of metakinesis and the disorganized spindle. one trivalent like structure was also observed rarely in some
Chromosomes occur mostly as univalents and lie scattered in cells of monoploid barley (Fig. 13).
the cell. As a result, only a very low frequency of bivalents Besides taking part in bivalent and trivalent like
(mostly rod types) and some very rare higher associations configurations, univalents at metaphase I may participate in
have been recorded at this stage (Figs. 12, 13). Some times the so called secondary associations like side-by-side (s-s), end-
observed bivalents were pseudobivalents formed as a result of to-end (e-e), end-to-side (e-s), multiple s-s, multiple e-e,
random pairing between chromosomes (36). multiple associations involving combinations of s-s, e-e and
e-s associations. These associations can be clearly identified
where univalents are oval or rod shaped, as in wheat, barley,
oats (Fig. 14). In species where the univalents are more or less
round, classification of associations into s-s, e-e, or e-s may
not be possible.
Anaphase I. In diploids homologous chromosomes move
to opposite poles of the spindle.
In many monoploids the absence of metaphase I plates
and the distribution of univalents to the poles make it difficult
to distinguish from the anaphase I (31, 11). Hence the term
“meta-anaphase” has been used in such cases to denote this
period of meiotic division. On the other hand, in monoploids
of certain species such as H. vulgare, it is possible to make a
clear distinction between metaphase I and anaphase I stages
(Fig. 15). The segregation of chromosomes at anaphase
I is usually random (36, 50). FISH analyses (24, 56) also
showed the random movement of the A- and B-genome
chromosomes of T. durum and maize, or in extreme cases,
all chromosomes moved to one pole, which resulted in non
reduction of chromosome number at the first meiotic division.
In spontaneous haploids of pearl millet, Jauhar (21) and Powell
et al. (45) observed that all seven univalents moved to one
pole. This phenomenon has essentially same consequence as
the FDR (first division restitution). When all univalents move
to one pole, they, in essence, bypass the reductional division of
meiosis and than, on equational division, produce unreduced
gametes. The phenomena described above could have breeding
implications. In this case the diploid chromosome complement
is first restored and than the diploid complement undergoes
mitotic (equational second meiotic division) division resulting
in unreduced gametes. During the equational division, sister
chromatids of each chromosome (univalents of haploids) move
to opposite poles, and therefore the two resultant nuclei are
essentially similar to each other or doubled haploids (DH) arisen
(7, 17). The instant homozygosity derived through chromosome
Figs. 12-17. Meiosis inbarlez haploids. Fig. 12. MI with five univalents and doubling of haploids can accelerate breeding programs (1,
one bivalent-like structure. Fig. 13. MI with one trivalent configuration. Fig. 30). However, the mechanism involved in the movement of
14. MI showing secondary associations of univalents. (side-to-side) Fig. 15.
univalents is not well understood. Lagging of varying numbers
AI. (the division of univalents). Figs. 16, 17. AI showing univalent division
and chromatidbridge. (Reproduced from 50) of univalents (Fig. 16) and division of univalents have been
commonly observed in monoploids of a number of species (11,
Metaphase I has been studied extensively in the majority of
15, 24, 25, 37). In addition, a small percentage of chromatid
monoploids (25, 31, 35, 37). In monoploids of barley, Symko
bridges with or without acentric fragments (Fig. 17) have been
(1969) observed a complete absence of pairing. However,
observed in haploids of barley and maize (59). Chromatid
Sadasivaiah and Kasha (50) found only a single bivalent-
bridges and acentric fragments could be formed as a result of:
like structure in barley haploids (Fig. 12). A similar low
i) recombination within duplicated segments present in reverse
frequency of bivalent-like structures has also been observed
order with respect to the centromere, ii) U-type exchange and
in monoploids of N. otophora (11), in tomato (14), Linum

648 BIOTECHNOL. & BIOTECHNOL. EQ. 22/2008/2


iii) recombination in univalent foldbacks, if the centromere within the chromosomes of the genome, would be necessary to
divides at anaphase I. explain the high degree of intimate pairing observed in haploid
Telophase I. takes place when nuclear membranes begin to barley (50). Similarly, a high degree of interchromosomal
form around the chromosomes that have moved to the poles. In duplication is also required to account for pairing observed
many haploids, varying numbers and sizes of micronuclei are between non-homologues in haploids. If duplicated segments
observed at telophase I (11, 25). exist within a genome, then preferential pairing should lead to
Second Meiotic Divisions. The second metaphase division a non-random association of non-homologous chromosomes.
are usually normal, with a normal spindle, although some However the presence of foldback pairing and occasional
irregularities have been reported in some haploids. Irregular heteromorphic bivalents and multivalents in barely haploids
distributions of chromosomes, laggards (Fig. 18) and chromatid may suggest that pairing is random.
bridges (usually without fragments; Fig. 19) are also observed A second possibility is that postulated by Rieger (46), who
at anaphase II. Bridges at anaphase II may be formed as a result has suggested that all chromosomes in general have a tendency
of failure of chromatids to separate at anaphase I. At the tetrad to pair in meiotic prophase. In case where some homologous
stage, varying frequencies of dyads, triads, and monads, with segments exist in a set of non-homologous chromosomes,
micronuclei which again vary in size and frequency have been preferential pairing may occur between such identical
observed in many haploids (24, 25, 37, 50). segments, but does not suppress non-homologous pairing.
However it appears that the Rieger’s hypothesis does not
satisfactorily explain the partial to almost complete absence of
pairing between non-homologues in some haploids (8, 11).
A third possibility is distributive pairing, a hypothesis
advanced by Grell, (16) to account for the non-random
disjunction of non-homologously paired univalents in
Drosophila melanogaster females. Distributive pairing is
thought to occur subsequent to exchange pairing and between
chromosomes that have failed to become involved in pairing
that results in exchange between homologues. According
Figs. 18 and 19. Meiosis in barley haploids. Late AII with laggards and
to Grell (16) the similarity of chromosomal size rather than
chromatid bridge. (Reproduced from 50) homology between chromosomes is the determining factor for
distributive pairing. Now on the basis of the occurrence of ring
Monoploids are usually sterile and reports of seedset on
univalents and heteromorphic bivalents as well as multivalent
haploids are extremely rare. However, some seed set has been
associations at diplotene and diakinesis, the distributive
observed after open pollination or cross pollination using the
hypothesis is not so important.
diploid parental species as male parent (24, 59).
A fourth possibility is the involvement of heterochromatin
Some aspects of Non-homologous Chromosome
as a causative factor in non-homologous pairing (49). Recent
Association in Haploids
biochemical evidence in situ and molecular hybridization
The pairing of homologous chromosomes is essential not shows that the DNA of eukaryotic organisms possessed
only for meiotic chromosomal recombination, but also for the various classes of repetitive nucleotide sequences (3) and some
faithful segregation of homologous chromosomes (12, 18, of these repetitive DNAs are localized in the heterochromatic
41). regions of chromosomes (43). In view of this, the possibility
Pachyten Pairing. Haploids derived from different plant of heterochromatic attraction, being involved in the non-
species vary with regard to the degree of non-homologous homologous associations observed in haploids cannot be
pairing at pachytene. A high degree of intimate pairing excluded.
between non-homologues chromosomes has been observed in A further possibility, that differential non-homologous
haploids of H. vulgare (50), while such pairing is almost absent pairing observed in haploids may be under the control of genetic
in haploids of N. otophora (11). However, types intermediate factors. According Martinez et al. (37) there were differences in
between the two extremes are also known in the literature (8, the meiotic behaviour of the haploids from different cultivars.
11). Although the cause for this differential behaviour is by no Variation in the effectiveness among cultivars of wheat is
means clear, some possible explanations may be considered. proposed to have a genetic origin and the role of the Ph1 locus
One such possibility is that segmental duplications provide a in different haploids is discussed (24).
basis for non-homologous association, and that the extent of
According Jauhar et al. (23, 25). Haploids without Ph1
duplication determines the amount of pairing. It should be
substitution line from Langdon 5D/5B, showed extensive
point out that such an interpretation may seems valid in cases
pairing, unlike of those with Ph1. The Ph1-haploids showed
where extensive genetic studies have provided evidence of
very little pairing which was limited mostly to intergenomic
the existence of gene duplications. However, according to this
explanation, a very extensive duplication, both between and

BIOTECHNOL. & BIOTECHNOL. EQ. 22/2008/2 649


rod bivalent formation between the chromosomes of the A and of an operon-like nature that may exist in higher organisms,
B genomes. and in studies of genetic fine structure, genetic transformation
At present, alternative ideas are developing. Attractive is (transgenosis) and nucleus – cytoplasmic organelle interactions
the concept that double strand DNA repair mechanisms that in higher plants.
find and use the undamaged homologue for repair have evolved
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