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Analysis

https://doi.org/10.1038/s41893-019-0336-9

Improved estimates of forest cover and loss in the


Brazilian Amazon in 2000–2017
Yuanwei Qin   1, Xiangming Xiao   1*, Jinwei Dong   2*, Yao Zhang   1, Xiaocui Wu   1,
Yosio Shimabukuro3, Egidio Arai3, Chandrashekhar Biradar   4, Jie Wang1, Zhenhua Zou1, Fang Liu2,
Zheng Shi1,6, Russell Doughty   1 and Berrien Moore III5

The data, information and knowledge on the tropical forest area and its dynamics in the Brazilian Amazon remain contentious.
We use time-series satellite images to quantify annual forest area, loss and gain in the Brazilian Amazon during 2000–2017.
We find that forest area was ~15% higher than the estimate by the official Brazilian forest dataset (PRODES), but annual forest-
loss rates were twice the PRODES estimates (~0.027 × 106 km2 yr–1 during 2001–2016). Forest-loss rates increased again after
2013. The El Niño and drought year (2015/2016) drove large forest area loss. The cumulative forest-loss area within the pro-
tected areas (which include ~50% of forests in the region) was ~11% of the total forest-loss area, which highlights the roles of
protected areas in forest conservation.

T
he area, spatial distribution and annual dynamics of tropi- Space-borne Synthetic Aperture Radar (SAR) technology has
cal forests substantially affect biodiversity, terrestrial carbon made notable progress in the past decade and has also been useful
cycle, hydrology and climate at local, regional and global in forest mapping13. SAR images, especially the L-band SAR images,
scales1,2. As the world’s largest tropical forest and most biodiverse can penetrate clouds and smoke haze to interact with tree trunks
terrestrial ecosystem3, the Amazon Basin is a  priority area for and branches and differentiate forests from non-forest biomes13. A
global conservation and warrants precise monitoring of anthro- number of recent studies demonstrated the potential of SAR images
pogenic impacts. Rapidly changing climate, land use, disturbances from the Advanced Land Observing Satellite (ALOS) Phased Array
(for example, fire) and human activity in the Amazon Basin have Synthetic Aperture Radar (PALSAR) to identify and map forests19,20.
resulted in substantial deforestation over the past several decades4,5. However, those forest maps produced by using only PALSAR
Several studies have generated maps of forest in the images often contained commission errors due to buildings, houses
Amazon through analyses of space-borne optical images at vari- and rocks21.
ous spatial resolutions, including coarse (≥1 km; for example, Several studies have reported the potential of combining PALSAR
the Advanced Very High Resolution Radiometer (AVHRR)6 and and optical images (MODIS, Landsat) to map tropical forests12,13.
Satellite Pour I’Observation de Ia Terre 4 (SPOT-4) VEGETATION7), Time-series optical images (for example, MODIS and Landsat) can
moderate (≥100 m; for example, Moderate Resolution Imaging capture the seasonal and interannual variation of vegetation canopy.
Spectroradiometer (MODIS)8,9) and fine (≥10 m; for example, Satellites acquiring daily images have a much higher probability
Landsat10,11) resolutions. However, these Amazon forest maps of cloud-free observations22. Compared to Landsat with its 16-d
have large uncertainties and have sparked intense debate due to repeat cycle at 30-m spatial resolution, MODIS sensors onboard the
image data availability, image data quality (cloud cover, shadows Terra and Aqua satellites have a daily repeat cycle at 250-m, 500-m
and fire-induced atmospheric contamination), mapping algo- and 1-km spatial resolution that offers more cloud-free observa-
rithms, forest definition, minimum mapping unit, etc.12–14. Forest tions in a year. MODIS data have therefore been used to track the
area, spatial distribution, temporal dynamics and annual rates of temporal dynamics of various land cover types and transitions in
forest loss have been contentious for decades12,15,16. Two recent stud- the Brazilian Amazon since 2000 (refs. 23–25). We developed the
ies15,17 reported that both the official Brazilian deforestation dataset Forest-MODIS and Forest-PALSAR/MODIS mapping tools, which
(PRODES)18 and Global Forest Watch (GFW)11 missed relatively use time-series image data and algorithms to identify forests and
large areas of forest loss. For instance, approximately 9,000 km2 of applied them to generate forest and evergreen forest maps for the
forest loss was not reported by the PRODES dataset for 2008–2012 pantropical zone26,27, China28, monsoon Asia27 and South America12.
due to the 6.25-ha minimum mapping unit15. These staggering In this study, our first objective was to more accurately map
omissions show the need for more accurate annual Amazon forest annual forest area in the Brazilian Amazon (Supplementary Fig. 1).
maps and improved analyses of forest area, spatial distribution and We combined PALSAR images at 50-m spatial resolution (Fig. 1a)
annual dynamics to support the scientific, legislative and land man- and MOD13Q1 (Vegetation Indices 16-Day L3 Global 250 m)
agement communities who strive to better understand and conserve images during 2007–2010, and we used the Forest-PALSAR/
rainforests in Brazil. MODIS mapping tool12 to generate annual maps of tropical

Department of Microbiology and Plant Biology, Center for Spatial Analysis, University of Oklahoma, Norman, OK, USA. 2Institute of Geographic Science
1

and Natural Resource Research, Chinese Academy of Sciences, Beijing, China. 3Brazilian National Institute for Space Research, São José dos Campos,
Brazil. 4International Center for Agricultural Research in the Dry Areas, Cairo, Egypt. 5College of Atmospheric and Geographic Sciences, University of
Oklahoma, Norman, OK, USA. 6Present address: Co-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment,
Nanjing Forestry University, Nanjing, China. *e-mail: xiangming.xiao@ou.edu; dongjw@igsnrr.ac.cn

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Analysis Nature Sustainability

70° W 65° W 60° W 55° W 50° W 45° W 70° W 65° W 60° W 55° W 50° W 45° W 70° W 65° W 60° W 55° W 50° W 45° W
5° N 5° N
a c e
0° 0°

5° S 5° S

10° S 10° S
ALOS PALSAR
image in 2010 MOD100 evergreen MOD100 evergreen
15° S forest frequency 15° S
Red: HH
forest loss
(2000–2017)
Green: HV 2016
18
20° S Blue: HH–HV 0 300 600 1,200 0 300 600 1,200 2002 0 300 600 1,200 20° S
State boundary km 1 km km

5° N 5° N
b d f
RR
AP
0° 0°

AM PA MA
5° S 5°S

10° S AC 10°S
TO
RO
MOD100 evergreen MOD100 evergreen MT
15° S forest net change forest gain 15°S
(2001–2016)
PALSAR/MODIS forest 2013
0 300 600 1,200 Non-forest Forest loss
frequency (2007–2010) 0 300 600 1,200 0 300 600 1,200
20° S km versus non-forest
km 2002 20°S
Non-forest 1 2 3 4 km
Forest gain Forest versus forest

70° W 65° W 60° W 55° W 50° W 45° W 70° W 65° W 60° W 55° W 50° W 45° W 70° W 65° W 60° W 55° W 50° W 45° W

Fig. 1 | Spatial distributions of forests in the Brazilian Amazon during 2000−2017. a, A false-colour composite map of PALSAR HH (Red), HV (Green)
and HH–HV (Blue) images in 2010. b, A frequency map of tropical PALSAR/MODIS forests in 2007−2010 (frequency values from 0 to 4) derived from
the Forest-PALSAR/MODIS algorithm. c, A frequency map of MOD100 evergreen forests in 2000−2017 (frequency values from 0 to 18) derived from
the Forest-MODIS algorithm. d, The net change of MOD100 evergreen forests between 2001 and 2016. e, The first year MOD100 evergreen forest loss
(deforestation) occurred. f, The first year MOD100 evergreen forest gain (reforestation and afforestation) occurred. AM, Amazonas; PA, Pará; MT, Mato
Grosso; AP, Amapá; RR, Roraima; AC, Acre; RO, Rondônia; TO, Tocantins; MA, Maranhão. PALSAR and MOD13Q1 (ref. 59) images were combined to
generate the PALSAR/MODIS forest (b). Time-series MOD09A1 land surface reflectance images60 were used to generate MOD100 forest maps (c–f).
Credit: Japan Aerospace Exploration Agency (JAXA) retains ownership of the PALSAR dataset used in a and b; USGS/NASA Landsat Programme (b–f).

forests (both evergreen and deciduous) in the Brazilian Amazon tree cover threshold values used, the forest area estimates from
(Fig. 1a,b). The resultant annual PALSAR/MODIS maps of forests the GFW dataset11 ranged from 3.71 × 106 km2 (≥60% threshold),
at 50-m spatial resolution during 2007–2010 were compared with 3.88 × 106 km2 (≥45% threshold), 3.97 × 106 km2 (≥30% threshold)
the official forest statistics from PRODES and other available forest to 4.05 × 106 km2 (≥10% threshold) in 2010. Our previous study12
map products (see Methods). Our second objective was to better suggested that a 30–60% tree cover threshold was appropriate for
understand the annual dynamics of forest area loss and gain (defor- estimating forest area from the GFW dataset when compared to
estation, reforestation and afforestation) in the region during 2000– forest maps derived from the PALSAR microwave images, which
2017. We generated annual evergreen forest maps for 2000−2017 used a definition of forest (10% tree cover) by the UN Food and
(named as MOD100; Fig. 1c) by applying a simple and robust Agriculture Organization (FAO). The JAXA dataset reported
Forest-MODIS algorithm (see Methods) to time-series MOD09A1 3.69 × 106 km2 of forest in 2010. The forest area in 2010 from our
(Surface Reflectance 8-Day L3 Global 500 m) data for each year26,27. PALSAR/MODIS forest map was 3.75 × 106 km2 in the Brazilian
We analysed the resultant annual evergreen forest maps to quantify Amazon, approximately ~2% higher than the JAXA dataset, which
the annual dynamics of forest area loss and gain within the Brazilian only used the PALSAR images19, ~10% higher than the MODIS land
Amazon, states and protected areas. Finally, we investigated the tra- cover dataset (MCD12Q1)9, ~12% higher than the European Space
jectories of forest area loss and gain as well as their driving factors. Agency (ESA) Climate Change Initiative (CCI) land cover dataset29
and ~15% (470,000 km2) higher than the PRODES dataset18. These
Results various forest area estimates highlight the discrepancies between
Annual estimates of forest area in 2007–2010. Forest area esti- the data products (Fig. 2a).
mates from the PALSAR/MODIS forest dataset ranged from
~3.77 × 106 km2 in 2007 to ~3.75 × 106 km2 in 2010 (Fig. 1a,b). We Annual estimates of evergreen forest areas in 2000–2017. We
compared the Brazilian Amazon forest maps for 2010 from seven used the MOD100 dataset to investigate the spatial distribution
data products (Supplementary Fig. 2) to illustrate the differences and annual dynamics of evergreen forests in the Brazilian Amazon.
between the forest data products and to explore the potential of Annual evergreen forest area from the MOD100 dataset ranges
improving estimates of annual forest area in the Brazilian Amazon from 3.72 × 106 km2 in 2007 to 3.70 × 106 km2 in 2010, only 1−2%
by integrating optical and SAR imagery and new algorithms (Fig. 2a lower than the forest area estimates from the Forest-PALSAR/
and Supplementary Table 1). The PRODES dataset estimated MODIS dataset (Fig. 2a). A spatial-temporal comparison between
3.28 × 106 km2 forest in 2010. Depending on the percentage of the MOD100 dataset and the Forest-PALSAR/MODIS dataset in

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Nature Sustainability Analysis
a MOD100 JAXA 2007–2010 demonstrates the robustness of the Forest-MODIS algo-
PALSAR/MODIS
GFW
MCD12Q1
ESA CCI
rithm and the reliability of the MOD100 dataset in the Brazilian
PRODES Amazon (Supplementary Fig. 3 and Supplementary Table 2). We
Forest area ( ×106 km2)

4.0
also compared the MOD100 dataset with the MCD12Q1, which
uses MODIS images and defines forest as tree cover >60% with a
3.5
tree height >2 m. The MCD12Q1 reports 3.42 × 106 km2 forests in
2010. The improvement of the MOD100 dataset over the MCD12Q1
3.0
dataset makes it possible to further investigate annual evergreen for-
2.5
est losses and gains in the Brazilian Amazon during 2000–2017.

b
Annual loss of evergreen forest area. Annual evergreen forest area
0.02 declined from 3.93 × 106 km2 in 2000 to 3.59 × 106 km2 in 2017 (Figs.
Annual forest loss/gain

0.00
1d and 2a), a net loss of 0.34 × 106 km2 (~20,000 km2 yr–1) or about
9% of the total evergreen forest area in 2000. To reduce commission
( ×106 km2)

−0.02
and omission errors, we excluded the first (2000) and last (2017)
−0.04 y = 0.004x + −8.0237
R 2 = 0.62 P = 0.012 year and analysed MOD100 annual evergreen forest loss during
−0.06 y = −0.0049x + 9.77
R 2 = 0.82 P = 0.096
y = −0.0048x + 9.6477
R 2 = 0.43 P = 0.346 2001–2016. The result showed a cumulative loss of 0.41 × 106 km2
−0.08 (Fig. 1e), which was much larger than the estimates from the GFW
(0.30 × 106 km2) and PRODES (0.18 × 106 km2) datasets. On aver-
c 0.00 age, the MOD100-estimated rate of annual evergreen forest loss
was 0.027 × 106 km2 yr–1, close to five times the size of the Federal
Annual forest loss

−0.02
( ×106 km2)

y = 0.0017x + −3.4637 District (5,780 km2) in Brazil.


−0.04 R 2 = 0.57 P = 0.018 The trajectory of annual forest area loss over time has been
y = (7 × 10−4x) + −1.4333 y = −0.0075x + 15.0878
−0.06 R 2 = 0.12 P = 0.656 R 2 = 0.73 P = 0.145 widely used for determining land cover and land-use change, con-
servation policies, management practices and identifying the socio-
−0.08 economic drivers of annual forest area dynamics2,4,5. The MOD100,
d GFW and PRODES datasets show three distinct phases of deforesta-
0.00
tion within the last two decades (Fig. 2b–d): (1) an initial phase of
Annual forest loss

−0.02 increasing forest loss (2001−2004), (2) a phase of decreasing forest


( ×106 km2)

y = 0.0025x + −5.0311
R 2 = 0.8446 P < 0.001
loss (2005−2013) and (3) a current phase of increasing forest loss
−0.04
y = −0.003x + 5.9825 y = (−6 × 10−4x) + 1.2021 (2013−2016). All three datasets show a substantial and significant
−0.06 R 2 = 1 P < 0.001 R 2 = 0.6 P = 0.124 (P < 0.05) decreasing trend (Fig. 2b–d) of forest area loss in the sec-
ond phase due to enforcement of public policy and interventions
−0.08
in the beef and soya markets5. During 2013-2016, both the GFW
e and MOD100 datasets showed a substantial increase in the defor-
estation rate, 7.5 × 103 km2 yr–1 and 4.8 × 103 km2 yr–1, respectively.
loss/gain ( ×106 km2)
Accumulated forest

0.0
However, the PRODES dataset shows a much smaller increase of
−0.2 0.6 × 103 km2 yr–1.
MOD100 gain
−0.4 MOD100 loss
GFW loss Hot-spots of evergreen forest area loss. We analysed the MOD100
−0.6
PRODES loss dataset and identified evergreen forest loss during 2001−2016
for individual pixels geographically (Fig. 1e). The hot-spots
f 0.0 0.0 were distributed in the ‘Arc of Deforestation’, which spans the
Brazilian states of Para (PA, 0.11 × 106 km2), Mato Grosso (MT,
loss ( ×106 km2)
Active fire area

−0.1 −0.1
Burned area
( ×106 km2)

0.11 × 106 km2), Maranhao (MA, 0.087 × 106 km2) and Rondonia


−0.2 −0.2 (RO, 0.052 × 106 km2) (Fig. 3). The total forest loss in these four
−0.3 Active fire area −0.3 states accounted for approximately 87% of the total evergreen forest
Burned area loss area loss in the Brazilian Amazon. Using a 5-km buffer in a geo-
−0.4 −0.4
spatial analysis, we found that over 90% of deforestation occurred
2000
2001
2002
2003
2004
2005
2006
2007
2008
2009
2010
2011
2012
2013
2014
2015
2016
2017

in close proximity to those areas deforested before 2002, which


indicated the degree of anthropogenic activities driving the spatial
dynamics of deforestation expansion (forest loss) in the Brazilian
Fig. 2 | Annual dynamics of forest areas in the Brazilian Amazon Amazon (Fig. 4).
during 2000−2017. a, Annual dynamics of tropical forest areas in The conversion of forests to pasture was associated with 60−80%
the Brazilian Amazon during 2000−2017, as estimated from seven of Amazon deforestation17,30,31. About 62% of the deforested area in
forest data products: (1) MOD100 (2000–2017), (2) Forest-PALSAR/ MT was converted into pasture during 2001−200431. The cattle count
MODIS (2007−2010), (3) GFW, 2000, 2010, tree cover ≥45%), (4) increased substantially from 48 × 106 head in 2000 to 86 × 106 head
PRODES (2000−2016), (5) Forest-JAXA (2007−2010), (6) MCD12Q1 in 2016 (Supplementary Fig. 4a). Assuming one cow per hectare
(2001−2013) and (7) ESA CCI (2000−2015). b–d, Annual evergreen of pasture32, the additional number of cattle may occupy 0.38 × 106
forest gain and loss during 2001−2016 from the MOD100 dataset km2 of pasture, which would account for ~94% of the evergreen
(b), from the GFW dataset (c) and from the PRODES dataset (d). e, forest-loss area. MT had the largest increase in cattle (11.4 × 106
Accumulated forest loss and gain during 2001−2016. f, Annual active head), followed by PA (10.2 × 106 head), RO (8.0 × 106 head) and
fire and burned area from MOD14A2 and MCD64A1 during 2001–2016. MA (3.6 × 106 head). Before 2006, the conversion of forests to crop-
Interannual variation of annual forest loss was divided into three periods, lands (for example, soya bean) also contributed to deforestation in
and for each period we performed a simple linear regression model (dotted the Brazilian Amazon5,31. After 2006, croplands were mostly estab-
lines) and reported its R2 and P values (b–d). lished on previously cleared land24. Overall, the four states with the

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Analysis Nature Sustainability
Active fire MOD100 GRACE
a b c
0.000 0

–0.005 –10

–0.010 –20

–0.015 –30

–0.020 –40
AM AP RR
–0.025 –50
d e f
0.000 0

GRACE TWSmin (cm)


–0.005 –10
Area (×106 km2)

–0.010 –20

–0.015 –30

–0.020 –40
PA AC RO
–0.025 –50
g h i
0.000 0

–0.005 –10

–0.010 –20

–0.015 –30

–0.020 –40
MT TO MA
–0.025 –50
02

04

06

08

10

12

14

16

02

04

06

08

10

12

14

16

02

04

06

08

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20

20
Year

Fig. 3 | State-level forest loss, fire and water storage in the Brazilian Amazon during 2002–2016. Annual area of the MOD100 evergreen forest loss and
active fire from MOD14A2, and the annual minimum terrestrial water storage (TWSmin) from GRACE for AM (a), AP (b), RR (c), PA (d), AC (e), RO (f),
MT (g), TO (h) and MA (i).

greatest increases in cattle numbers and cropland area also experi-


2002
2003
2004
2005
2006
2007
2008
2009
2010
2011
2012
2013
2014
2015
2016
enced the largest losses of evergreen forests (Supplementary Fig. 4)
0.00
according to the MOD100 evergreen forest dataset.
Annual forest loss (×106 km2)

–0.01
Driving factors of evergreen forest area loss. We investigated
–0.02
the factors driving annual forest losses in the MOD100 dataset
during 2000–2017 (Supplementary Fig. 5). Annual forest losses –0.03
corresponded well to climate parameters, and the standardized
–0.04 Distance ≤5 km
cross-correlation coefficients (lag = 0) were −0.89, 0.92 and 0.96
between annual deforestation rate and annual precipitation, TWSmin –0.05
Distance 5–10 km

and active fire area, respectively (Supplementary Fig. 6). This cross- Distance >10 km
–0.06
correlation suggested that annual forest loss was higher in dry years,
especially during the strong El Niño years (2010 and 2015/2016)
(Fig. 2b, Supplementary Figs. 5a–c and 7). The deforested area Fig. 4 | Forest loss during 2002–2016 in the Brazilian Amazon. MOD100
in 2010 and 2015/2016 were about 2.3 and 3.7 times higher than evergreen forest-loss area over three distances near areas deforested
the deforested area in 2009 and 2013, respectively. However, the before 2002 using the geospatial buffer analysis.
PRODES dataset did not indicate obvious increases of deforested
area in 2010 and 2015/2016.
During these drought years, the data from the Tropical Rainfall of Deforestation’ (Supplementary Fig. 5d), corresponded well to
Measuring Mission (TRMM) and the Gravity Recovery and Climate GRACE TWSmin and fire activity (Fig. 3). Although the wet states
Experiment (GRACE) showed remarkably low annual precipita- (AM, AP and RR) in northern Brazilian had relatively small areas
tion and annual TWSmin (Supplementary Fig. 5b), in addition to of deforestation, they also experienced increased deforestation in
substantial increases in fire activity and burned area (Fig. 2e). We severe drought years.
also found that in the non-drought years (2006, 2008, 2009, 2011
and 2013), about 23% of the deforested areas experienced fires in Annual gain of evergreen forest areas. We defined forest gain as
the same year that deforestation occurred. In the drought years, non-forested area that was converted into continuous forest for
however, deforested areas often experienced more fire (36%) in the ≥4 years (ref. 25). During 2001–2013 the MOD100 dataset showed
same year (Supplementary Figs. 8a,9 and 10). About 70% of ever- a total gain of 0.071 × 106 km2 in evergreen forest area in the
green forests had a fire history before deforestation (Supplementary Brazilian Amazon (Figs. 1f and 2b). This study reported the annual
Fig. 8b). Forests in the Amazon can be degraded over time due to dynamics of both deforestation and reforestation in the Brazilian
successive fires, drought and selective logging16,33. These degraded Amazon using time-series image data and time-series algorithms.
forest stands can then become more vulnerable to future drought Reforestation area, although relatively small, did partially offset
and fire. The relatively dry states (PA, RO, MT and MA) in the ‘Arc deforestation by 21% in the Brazilian Amazon during 2001–2013,

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Nature Sustainability Analysis
a c

RR MOD100 (non-PAs) MOD100 (PAs)


PALSAR/MODIS forest (PAs) PALSAR/MODIS forest
AP
Accumulated PAs
4.0

Forest area (×106 km2)


AM PA
MA 3.0

AC 2.0
RO TO
Protected area
proposed or MT 1.0
MOD100
designated year evergreen forest
1990 and before 0.0
loss year
1991–2000 2016

2000
2001
2002
2003
2004
2005
2006
2007
2008
2009
2010
2011
2012
2013
2014
2015
2016
2017
2001–2005 500
2006–2013 km 2002

b d
0.06 Forest loss in PAs

Forest gain
Forest loss in non-PAs

(×106 km2)
0.04
Forest gain in PAs
AM
0.02 Forest gain in non-PAs

PA 0
Forest loss
(×106 km2) –0.02

–0.04

–0.06
2002
2003
2004
2005
2006
2007
2008
2009
2010
2011
2012
2013
2014
2015
2016
MT 250 TO
km

Fig. 5 | Annual dynamics of forest areas within PAs and non-PAs in the Brazilian Amazon during 2000–2017. a, The proposed or designated year for the
PAs and the forest-loss year from the MOD100 dataset. b, A zoom-in window from a. c, The forest area changes within the PAs and non-PAs from the
MOD100 and PALSAR/MODIS datasets and the accumulated areas of PAs in the Brazilian Amazon during 2000–2013. d, Forest loss and gain within the
PAs and non-PAs. Credit: PAs maps, UN Environment / IUCN (a,b)

which indicates that reforestation played an important role in Discussion


reducing net forest loss and carbon emissions. Our results show large discrepancies between PALSAR/MODIS for-
est product and the Landsat-based forest product (PRODES). We
Annual forest area dynamics within protected areas. In an investigated to what degree cloud cover and shadow affected optical
effort to conserve forests in the Brazilian Amazon, protected areas images in terms of the number of good-quality observations in 1 year
(PAs) have increased from 1.09 × 106 km2 in 2000 to 2.32 × 106 km2 in the Brazilian Amazon (Fig. 6). Analysis of all Landsat images in
in 2013 (Fig. 5), which accounted for 43% of the total land area 2010 shows that a number of pixels in the Brazilian Amazon do not
of the Brazilian Amazon. We analysed annual evergreen forest have good-quality observations in 1 year due to cloud cover and
area dynamics within PAs of the Brazilian Amazon during shadow (Fig. 6). In addition, about 178–210 Landsat images (path/
2000–2017. PAs sheltered about 50% of the total evergreen forest row) were used in PRODES before 2009 and about 228 Landsat images
area in the Brazilian Amazon in 2013. Total evergreen forest area (path/row) have been used since 2009 (Supplementary Fig. 11).
within PAs decreased slightly from 1.98 × 106 km2 in 2000 to Approximately 5–15% of the area captured by Landsat images still
1.96 × 106 km2 in 2017 (~1.3% loss over 17 years) (Fig. 5c). This had cloud cover (Supplementary Fig. 11). In comparison, almost
small change in forest area clearly demonstrates the critical role all MODIS pixels had good-quality observations in 1 year due to
of PAs in forest conservation. When we analysed annual ever- its daily revisit cycles. Those Landsat pixels with no or few good-
green forest maps, the cumulative deforested area within PAs quality observations in 1 year contributed to the smaller estimates
was 0.044 × 106 km2, accounting for ~11% of total forest area loss of forest areas reported by PRODES (Supplementary Fig. 2). For
(0.41 × 106 km2) and the cumulative reforestation within PAs, those Landsat pixels with no or few good-quality observations in
0.014 × 106 km2, ~20% of total forest area gain (0.071 × 106 km2). In 1 year, GFW used cloud-free observations in neighbouring year(s),
comparison, evergreen forest area in non-PAs decreased substan- which contributed to the uncertainty in annual forest area esti-
tially from 1.95 × 106 km2 in 2000 to 1.64 × 106 km2 in 2017 (Fig. 5c). mates reported by GFW. We also carried out accuracy assessments
Deforestation within/around PAs occurred throughout the study of these forest data products using common reference datasets (see
period, rendering them fragmented, isolated and under increased Supplementary Information). The PALSAR/MODIS and GFW
threat of further deforestation (Fig. 5b). Previous studies analysed datasets have similar overall accuracy of ~90% and are higher than
deforestation data during 1998–2010 and reported that PAs reduced that of PRODES (~80%) (Supplementary Table 3). The PRODES
deforestation and carbon emissions34,35. As various socio-ecolog- forest had a noticeable omission error (~25%) in forest area esti-
ical factors influence illegal (and legal) deforestation in PAs, our mates in 2010 (Supplementary Table 3). Our PALSAR/MODIS
results could be used to strengthen the governance of PAs in the forest maps suggested that the Brazilian Amazon may have sub-
Brazilian Amazon. stantially more forest area than estimated by the PRODES dataset,

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Analysis Nature Sustainability

70° W 65° W 60° W 55° W 50° W 45° W 75° W 70° W 65° W 60° W 55° W 50° W 45° W
e
5° N a b 5° N 14

Area percentage of total area


LT5 LE7 LT5 + LE7 MOD09A1
12
0° 0° 10
8
5° S 5° S
6

10° S 4
10° S
2
15° S 0
15° S
LE7 0 3 6 9 12 15 18 21 24 27 30 33 36 39
LT5
20° S Numbers of good-quality observations
in the Brazilian Amazon
5° N f
5° N c d
14
LT5 LE7 LT5 + LE7 MOD09A1

Area percentage of forest area


0° 0° 12
10
5° S 5° S
8

10° S 10° S 6
4
15° S 15° S 2
LT5
MOD09A1
LE7 0
20° S 0 3 6 9 12 15 18 21 24 27 30 33 36 39
75° W 70° W 65° W 60° W 55° W 50° W 45° W 75° W 70° W 65° W 60° W 55° W 50° W 45° W
Numbers of good-quality observations
in the forest area
Good observation frequency in 2010
0 1 2 3–5 6–10 11–20 21–30 >30

Fig. 6 | Numbers and frequency of good-quality observations in one year from Landsat 5 TM (LT5), Landsat 7 ETM+ (LE7), LT5 + LE7 and MOD09A1
land surface reflectance in the Brazilian Amazon in 2010. a, Numbers of good-quality observations from all LT5 land surface reflectance images. b,
Numbers of good-quality observations from all LE7 land surface reflectance images. c, Numbers of good-quality observations from the combination of all
LT5 and LE7 land surface reflectance images. d, Numbers of good-quality observations from all MOD09A1 land surface reflectance images60. e, Frequency
of good-quality observations in the Brazilian Amazon. f, Frequency of good-quality observations in the PALSAR/MODIS forest area in the Brazilian
Amazon. Credit: USGS/NASA Landsat Programme provides LT5 and LE7 land surface reflectance images for a–c.

which has been widely used in many scientific studies5,8,34 and in Amazon, most of which focused primarily on commercial planta-
public policy development. tions, such as eucalyptus, pine and rubber38. Compared to native
Three publications reported the underestimation of forest area forests, commercial plantations usually have small species rich-
loss in the PRODES data and likely casual factors15,17,36. The larger ness and simple canopy structure, which have very limited values
estimate of evergreen forest loss from the MOD100 dataset accentu- for biodiversity conservation39–42. The largest tropical reforestation
ates the likelihood of underestimates in other existing data products, project in recent history was launched in late 2017 by Conservation
specifically PRODES. The PRODES forest product had high omis- International, the Brazilian Ministry of Environment, the Global
sion errors of about 40% and 28% in 2000 and 2010, respectively Environment Facility, the World Bank and the Brazilian Biodiversity
(Supplementary Table 3), which can be attributed, to a large degree, Fund with the aim to plant 73 × 106 trees in the Brazilian Amazon
to the spatial extent of satellite images to identify forest and the fact by 2023. Under the Paris Climate Agreement, Brazil has commit-
that Landsat images have a number of pixels with no good-quality ted to restoring or reforesting 0.12 × 106 km2 of land by 2030. Our
observations in 1 year (Supplementary Fig 11). PRODES forest data approaches for mapping the spatio-temporal changes of forests could
has a minimum mapping unit of 6.25 ha, thus it would not account identify the areas with successful and unsuccessful reforestation
for forest loss in small patches15,36. Compared with GFW and efforts and provide valuable information for reforestation projects.
MOD100, PRODES underestimated forest-loss area by 67–127%. In conclusion, this study demonstrates the potential of
Landsat 7 Enhanced Thematic Mapper Plus (ETM +) images used time-series microwaves, optical images and algorithms to char-
in the GFW forest-loss dataset also had a fair number of pixels with acterize forest areas in the Brazilian Amazon. The resultant data-
no or few good-quality observations in 1 year. For example, about sets could have important implications for not only land-use
13.5% of forest area had less than three good-quality observations policy, management and conservation, but also our understanding of
in 2010 (Fig. 6). The phenological characteristics of many land the terrestrial carbon cycle, hydrology and climate. Recent develop-
cover types could be similar for some time periods in the Brazilian ment and policy changes in Brazil, such as the changes to the forest
Amazon37, and thus a limited amount of good-quality observations code—the proposed one-sentence constitutional amendment (PEC-
in 1 year could result in an underestimation of forest-loss area. 65)—and the large-scale construction of dams and highways prob-
About 27% of forest-loss area in the PRODES dataset was not iden- ably threaten environmental protection policies and efforts that aim
tified in the GFW dataset during 2001–201315. In comparison, the to conserve the forest in the Brazilian Amazon43,44. If the Brazilian
MOD100 product used all the observations in 1 year (full or dense government’s deforestation target is to be met (0.004 × 106 km2 yr–1)30,
time-series) from MOD09A1, which has six or more good-quality concrete efforts must be made to improve our capacity for moni-
observations over 99% of the pixels (Supplementary Fig. 11). toring, reporting and verifying deforestation and reforestation,
Our results reported forest area gain in the Brazilian Amazon. and to reverse the sharply increasing trend in forest loss over the
Various forest restoration projects were carried out in the Brazilian past few years.

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Nature Sustainability Analysis
Methods Multiple forest maps. PALSAR/MODIS forest maps (2007–2010). We used the
Remote sensing data. PALSAR data. The PALSAR onboard the ALOS satellite was FAO’s forest definition in our forest mapping studies: forest as a land parcel
launched on 14 January 2006. The annual 50-m PALSAR mosaic products are in (≥0.5 ha) covered by 10% or more tree cover with tree height ≥5 m at their
the Fine Beam Dual (FBD) polarization mode (HH and HV dual polarizations) maturity. We developed a new and robust decision tree approach that combined
and have been slope-corrected, orthorectified and radiometrically calibrated19,45. PALSAR images (50 m) and MOD13Q1 NDVImax images (250 m) to identify
HH means that microwave energy was transmitted and received in the horizontal and map forests. We used this to generate annual maps of forests at 50-m spatial
direction by the antenna and HV means that microwave energy was transmitted resolution in China28, monsoon Asia27 and South America12. The resultant annual
in the horizontal direction and received in the vertical direction. We converted PALSAR/MODIS forest maps have been evaluated with extensive ground reference
the digital number (DN) values into gamma-naught backscattering coefficient in data interpreted from in situ global positioning system-based field photos and
decibels (γ°) using a calibration coefficient (equation (1)). Very High Resolution (VHR) images and compared with other forest products
and national forest inventory data. In this study, we used annual maps of forests in
γ  ¼ 10 ´ log10 <DN2 > þCF ð1Þ South America during 2007–2010 from the Forest-PALSAR/MODIS approach12,
and the Brazilian Amazon boundary map was used to subset the South American
where CF is the absolute calibration factor of –83. We further calculated PALSAR forest maps.
difference (equation (2)) and ratio (equation (3)) layers as:
MOD100 evergreen forest maps (2000–2017). We used three freely available
Difference ¼ HH � HV ð2Þ datasets as the input datasets for algorithm training in 2010: (1) the Global
Land Cover Validation Reference Dataset (GLCVRD), (2) MCD12Q1 land
Ratio ¼ HH=HV ð3Þ cover product and (3) ESA CCI land cover product. The GLCVRD dataset
was produced from analyses of VHR images (QuickBird-2, WorldView-1/2,
A number of studies have reported that PALSAR backscattering coefficients are IKONOS-2 and GeoEye-1) acquired mostly in 2010 and based on a stratified
sensitive to tree structure and can be used to generate annual maps of forests12,19,27,28 random sampling design56–58. There are 18 sites in the Brazilian Amazon and
and to estimate forest above-ground biomass in different climate regions46–48. each of them covers an area of about 5 × 5 km2 at a 2-m spatial resolution
(Supplementary Fig. 13). The GLCVRD has five land cover types (Tree, Water,
MOD13Q1 Normalized Difference Vegetation Index (NDVI). The MODIS/Terra Barren, Other Vegetation and Ice & Snow) and two non-land cover types (Cloud
MOD13Q1 data are a composite product with the best quality pixel in each 16-d and Shadow). We grouped the five land classes into two layers (tree, non-tree)
window from daily observations. MOD13Q1 products include the NDVI and and the two non-land cover types into one class (bad observations) for each
Enhanced Vegetation Index (EVI)49. The MOD13Q1 NDVI and EVI products are site’s map and converted their universal transverse mercator projection into an
computed from atmospherically corrected bi-directional surface reflectance, which ‘equal-area projection’ (that is, South_America_Albers_Equal_Area_Conic). We
has been masked for water, clouds, heavy aerosols and cloud shadows. NDVI is aggregated the tree, non-tree and bad observations layers into the same spatial
calculated as a normalized ratio between the red and near-infrared (NIR) surface resolution as MOD09A1 (500 m) and calculated their percentage area fraction
reflectance. A 16-bit vegetation index quality is provided in the dataset, and only within individual pixels. We excluded those pixels with more than 1% area of bad
good-quality observations were used in this study. observations, and a total of 966 pixels at MODIS 500-m spatial resolution were
selected for algorithm training. For those areas covered by the GLCVRD dataset,
MOD09A1 data and vegetation indices. The MOD09A1 (v.006) data product has we selected evergreen forest and non-evergreen forest training samples within
seven land surface spectral bands and contains 1-d observations within an 8-d evergreen forest and non-evergreen forest boundaries derived from MCD12Q1
period. The MOD09A1 has a 16-bit surface reflectance data quality description. and ESA CCI land cover products.
We used the MOD09A1 standard data quality flags to identify observations A unique physical feature of evergreen forests is that they have green leaves all
covered by cloud (cloudy and mixed), internal cloud, cloud shadow, high aerosols, year. Conversely, deciduous forests usually have few or no green leaves during the
high cirrus or snow. We treated those observations with the above-mentioned dry season or winter season, leaving soils and tree trunks to be observed by space-
quality flags as bad observations and excluded them from the time-series data borne sensors. We developed and reported a new, simple and robust algorithm
analysis. In addition, we also treated those observations with blue band surface that generated annual maps of tropical evergreen forests in the pantropical zone
reflectance value >0.20 as bad observations and excluded them from data analysis. and monsoon Asia based on the canopy phenology from analyses of time-series
Over 99.9% of the MOD09A1 dataset had two or more good-quality observations water-related LSWI and greenness-related EVI calculated from the MOD09A1
in the Brazilian Amazon (Supplementary Fig. 12). We calculated three vegetation product26,27. The Forest-MODIS algorithm is well documented in our previous
indices: NDVI (equation (4)), EVI (equation (5)) and Land Surface Water Index studies26,27. First, we counted the number of good-quality observations that had no
(LSWI) (equation (6))50 using blue, red, NIR (841–875 nm) and shortwave-infrared cloud (cloudy and mixed), internal cloud, cloud shadow, high aerosols, high cirrus
(SWIR) (1628–1652 nm) bands. or snow (equation (7)). Second, of those good-quality observations, we counted
the number of observations with LSWI ≥ 0 (equation (8)). Third, we calculated the
ρNIR � ρred percentage of observations with LSWI ≥ 0 out of all good observations in 1 year
NDVI ¼ ð4Þ
ρNIR þ ρred (equation (9)). Fourth, we calculated the minimum EVI values in those good-
quality observations in 1 year (equation (10). In this study, we applied this Forest-
ρNIR � ρred MODIS algorithm (PCTLSWI ≥ 0 = 100% and EVImin ≥ 0.2; ref. 26) (Supplementary
EVI ¼ 2:5 ´ ð5Þ Fig. 14) to MOD09A1 time-series data in individual years during 2000–2017 and
ρNIR þ 6 ´ ρred � 7:5 ´ ρblue þ 1
generated annual maps of evergreen forest in the Brazilian Amazon (Fig. 1c) in the
ρNIR � ρSWIR web-based cloud computing platform Google Earth Engine. Our Forest-MODIS
LSWI ¼ ð6Þ algorithm is sensitive to evergreen forest loss (Supplementary Fig. 15) and gain
ρNIR þ ρSWIR (Supplementary Fig. 16).
where ρblue, ρred, ρNIR and ρSWIR represent land surface reflectance values from n
X
MOD09A1 blue, red, NIR and SWIR bands, respectively. N Good�quality observation ¼ ð Oi Þ ð7Þ
i¼1

Precipitation data from TRMM. We calculated annual precipitation during 2001–


2016 using observations from TRMM, a joint mission between NASA and JAXA. m � 
X
We used the precipitation from the TRMM 34B2 product with a 3-h temporal M LSWI  0 ¼ Oj ð8Þ
resolution and a 0.25-degree spatial resolution51. j¼1

TWS data from GRACE. The 1° GRACE Tellus Monthly Mass Grids provide M LSWI  0
monthly gravitational anomalies, which have units of ‘Equivalent Water Thickness’, PCTLSWI  0 ¼ ´ 100 ð9Þ
N Good�quality observation
indicating the deviations of mass in terms of the vertical extent of water in
centimetres52,53. We calculated annual TWS from the 1° GRACE (GRACE TWSmin)
Tellus Monthly Mass Grids dataset from 2002 to 2016 in the Brazilian Amazon. EVImin ¼ minðO1 ; O2 ; ¼ ; Oi ; ¼ ; On Þ ð10Þ

Active fire and burned area data. The active fire and burned area data were from 0 ≤ n ≤ 46, 0 ≤ m ≤ 46.
MOD14A2 (Terra Thermal Anomalies & Fire 8-Day Global 1 km, v.006)54 and where NGood-quality observation, MLSWI ≥ 0, PCTLSWI ≥ 0 and EVImin are the number of good-
MCD64A1 (MODIS Burned Area Monthly Global 500 m, v.006)55, respectively. We quality observations, the number of observations with LSWI ≥ 0 from good-
selected active fire with nominal and high confidence levels and burned areas with quality observations, the percentage of observations with LSWI ≥ 0 out of all good
sufficient valid data in the reflectance time-series in this study. We then generated observations in one year and the minimum EVI (EVImin) values of those good-
annual active fire and burned area binary maps if the active fire and burned areas quality observations in one year, respectively. 𝑂1, 𝑂2, O𝑖, Oj, and O𝑛 are the 1st, 2nd,
occurred in 1 year in the Brazilian Amazon, respectively. ith, jth and nth individual observation in one year, respectively.

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Analysis Nature Sustainability
Deforestation is the process of converting forest into non-forest. Reforestation applied to create the final land cover product, including sample bias correction
is the process of non-forest being reforested or afforested. Short-rotation industrial and spatial explicit prior probability adjustments. IGBP classification map includes
plantation (for example, eucalypt) usually has a cycle of 4–6 years25, thus we five forest types, including evergreen needleleaf forest, evergreen broadleaf forest,
defined reforestation as an area converted from non-forest into forest for at least deciduous needleleaf forest, deciduous broadleaf forest and mixed forest, which we
4 years. We developed an approach to identify and map evergreen forest change merged into a single forest layer (Supplementary Fig. 2).
(deforestation and reforestation) in the Brazilian Amazon based on the annual
MOD100 evergreen forests. This approach includes three steps: (1) we masked out ESA CCI land cover (2000–2015). The 300-m ESA CCI land cover maps use the
those MOD100 pixels lacking any good-quality observation, (2) we applied a three- Land Cover Classification System developed by the FAO29. First, a unique baseline
observation moving window filter and reduced random errors in the MOD100 land cover map is generated using 7-d time-series medium resolution imaging
evergreen forest maps and (3) we identified and mapped the location and date for spectrometer imagery during 2003–2012. Independently from this baseline, land
deforestation (equation (11)) and reforestation (equation (12)) based on the refined cover changes are detected at 1 km based on the AVHRR time-series between
MOD100 evergreen forest maps during 2001–2016. 1992 and 1999, SPOT-VEGETATION time-series between 1999 and 2013 and
8 9 PROBA-V data for years 2013, 2014 and 2015. The last step consists of back-dating
< MOD100k ¼ F; >
> = and updating the 10-year baseline land cover map to produce the 24 annual land
Deforestationkþ1 ¼ MOD100kþ1 ¼ NF; ð11Þ cover maps from 1992 to 2015. We used five forest classes in this study: (1) tree
>
: >
;
MOD100kþ2 ¼ NF cover, broadleaved, evergreen, closed to open (>15%), (2) tree cover, broadleaved,
deciduous, closed to open (>15%), (3) tree cover, needle-leaved, evergreen,
8 9 closed to open (>15%), (4) tree cover, needle-leaved, deciduous, closed to open
>
> MOD100k ¼ NF; >> (>15%) and (5) tree cover, mixed leaf type (broadleaved and needle-leaved)
>
> >
>
> > (Supplementary Fig. 2).
< MOD100kþ1 ¼ F; >
> =
Reforestationkþ1 ¼ MOD100kþ2 ¼ F ð12Þ
>
> > Accuracy assessment and inter-comparison of forest area data products. We
> MOD100kþ3 ¼ F >
> >
>
>
> >
> carried out substantial accuracy assessment and inter-comparison of forest area
: ;
MOD100kþ4 ¼ F data products (see Supplementary Information). The MOD100 forest dataset in
2000 and 2010 had an overall accuracy of ~97% (Supplementary Tables 3 and 4),
where MOD100 is the evergreen forest maps, F and NF are the abbreviations for based on the same reference dataset used in accuracy assessment of PALSAR/
evergreen forest and non-evergreen forest, respectively, and k = 2001,…, 2016. MODIS, PRODES and GFW. The MOD100 forest-loss dataset had an overall
accuracy of ~98% (Supplementary Table 5). The MOD100 forest gain dataset had
JAXA forest maps (2007–2010, 2015–2016). The 25-m annual JAXA forest an overall accuracy, user’s accuracy and producer’s accuracy of 99.18% (±0.27),
maps19 were produced using PALSAR FBD polarization mode data from June 48.72% (±16.22) and 87.06% (±16.36), respectively (Supplementary Table 5).
to September during 2007−2010 and 2015−2016. Data pre-processing includes
speckle reduction, ortho-rectification and slope correction and intensity Data availability
equalization between neighbouring strips. In general, a decision tree algorithm was The PALSAR/MODIS forest and MOD100 forest data that support the findings
used to generate the JAXA forest maps. First, a 5 × 5 pixel median filter was used of this study are available from the corresponding author upon request and will
to reduce noise in images, followed by a multi-resolution segmentation. Then, 15 be made available to the public. The other datasets are publicly available online
region-specific HV threshold values were determined to identify forest pixels based (Supplementary Table 6).
on the ground references and cumulative distribution functions. We aggregated the
25-m JAXA forest maps to 500-m resolution for comparison with MODIS-based
forest maps. Received: 16 June 2018; Accepted: 14 June 2019;
Published: xx xx xxxx
PRODES forest dataset (2000–2016). The PRODES project at the Brazilian National
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