Vous êtes sur la page 1sur 7

Process Biochemistry 73 (2018) 117–123

Contents lists available at ScienceDirect

Process Biochemistry
journal homepage: www.elsevier.com/locate/procbio

Biotransformation of 4-hydroxyphenylacetonitrile to 4-hydroxyphenylacetic T


acid using whole cell arylacetonitrilase of Alcaligenes faecalis MTCC 12629

Neerja Thakur, Vijay Kumar, Shikha Thakur, Nikhil Sharma, Sheetal, Tek Chand Bhalla
Department of Biotechnology, Himachal Pradesh University, Summer Hill, Shimla, 171 005, Himachal Pradesh, India

A R T I C LE I N FO A B S T R A C T

Keywords: The whole cell arylacetonitrilase of Alcaligenes faecalis MTCC 12629 was employed to develop a bioprocess for
Nitrilase the synthesis of 4-hydroxyphenylacetic acid (4-HPAA) from 4-hydroxyphenylacetonitrile (4-HPAN).
Bioprocess Isobutyronitrile emerged as the most appropriate inducer with a 1.2-fold enhanced nitrilase production in in-
4-Hydroxyphenylacetic acid ducer feeding approach. A. faecalis MTCC 12629 nitrilase preferably hydrolyzed 4-HPAN, 4-aminoyphenylace-
tonitrile, mandelonitrile and phenylacetonitrile to their corresponding acids. Thermostability profile revealed
the stability of nitrilase at 40, 45 and 50°C with the half-life of 45 h, 36 h and 13 h, respectively. Michaelis
constant (Km) and reaction velocity (Vmax) of nitrilase were calculated as 20 mM and 2 U/mg dcw, respectively.
This nitrilase exhibited complete conversion of 4-HPAN to 4-HPAA at 45°C in 50 mM K2HPO4/KH2PO4 buffer
(pH 7.0) in 30 min. A fed batch process designed at 500 ml with five feedings of substrate resulted in 150 mM
product formation using 18 U/ml whole cells nitrilase (16 mg/ml dcw) at 45°C. This is the first report on the
production of 4-HPAA through nitrilase mediated pathway with the volumetric and catalytic productivity of
23 g/l and 4.13 g/g dcw/h, respectively.

1. Introduction tataricus and Rhodiola rosea, which are Chinese herbs that are used for
curing pulmonary diseases [18]. Furthermore, several previous studies
Nitrilase mediated hydrolysis of nitriles has been explored ex- have reported 4-HPAA as a potential hypopigmenting agent [19–21], as
tensively, as nitriles are synthetically important chemical building well as a good inhibitor of hypertonicity and hypoxia, by lowering the
blocks which can be hydrolysed to generate high-value acids and inflammatory cytokines level [18]. 4-HPAA can be synthesized via
amides [1–3]. Nitrilases catalyse the transformation of myriad of ni- chemical routes such as chloromethylation of anisole, acetylation of p-
triles into their corresponding acids and ammonia, under mild reaction cresol and reactions of phenol with different reagents [22], however,
conditions and without the formation of amide intermediates. They there is poor crystallizability of the intermediates in the anisole and p-
have thus emerged as an important tool in green chemistry [4–6]. They cresol based methods, while the methods involving phenol suffer from
are acknowledged as useful biocatalysts for the synthesis of pharma- poor yield of the product and generation of unwanted by-products [22].
ceutically important drug intermediates [7,8], degradation of toxic ni- Another method for the synthesis of 4-HPAA utilizes benzyl phenyl
triles [9] and production of commercially valuable acids [10]. Nitrilases ether or hydroxymandelic acid, but its limitations include requirement
are also preferred due to their ability to hydrolyse different classes of of elevated temperature and pressure for the reaction and the use of
nitriles such as aliphatic [11,12], aromatic [13,14], heterocyclic [15] expensive solvents for the extraction of intermediates [22,23]. Thus in
and arylacetonitriles [16,17]. Arylacetonitriles are the derivatives of comparison to the chemical routes, the synthesis of 4-HPAA using ni-
acetonitrile in which the hydrogen of the methyl group substituted by trilase is advantageous due to the requirement of mild reaction condi-
phenyl or heterocyclic groups (arylacetonitriles). Substituted phenyla- tions, easy downstream processing and minimal generation of by-pro-
cetonitriles, such as 4-hydroxyphenylacetonitrile, 4-aminophenylace- ducts. The transformation of nitrile to its corresponding acid can be
tonitrile and mandelonitrile act as suitable substrates for arylacetoni- accomplished using whole cell, cell free extract, purified or im-
trilases [17]. An arylacetic acid, 4-hydroxyphenylacetic acid (4-HPAA), mobilized nitrilase. Biotransformation reactions involving whole cell
finds its application as an intermediate in the chemical synthesis of nitrilase are more economical and technically beneficial, as whole cells
atenolol drug (β-receptor blocking agent) which is used in the cure of provide a natural environment and stability to the enzyme inside. The
cardiovascular diseases. This acid is also an active component of Aster activity of nitrilase for 4-HPAN has earlier been reported in bacteria


Corresponding author.
E-mail address: bhallatc@rediffmail.com (T.C. Bhalla).

https://doi.org/10.1016/j.procbio.2018.07.012
Received 11 February 2018; Received in revised form 25 May 2018; Accepted 17 July 2018
Available online 19 July 2018
1359-5113/ © 2018 Elsevier Ltd. All rights reserved.
N. Thakur et al. Process Biochemistry 73 (2018) 117–123

[17] and in plants [24], however, studies pertaining to the development 2.6. Isobutyronitrile (inducer) feeding for hyperinduction of nitrilase
of nitrilase-mediated process for the synthesis of 4-HPAA from 4-HPAN
have not been conducted so far. Keeping in view the above, the present The amount of isobutyronitrile was varied in the culture of A. fae-
work was undertaken with the aim of developing a bioprocess for the calis MTCC 12629 in 15 sets of combinations. In set 1 (control), no
synthesis of 4-HPAA from 4-HPAN by using whole cell nitrilase of A. isobutyronitrile was added to the culture at all the time intervals. In sets
faecalis MTCC 12629. To the best of our knowledge, this is the first 2, 3, 4, 5 and 6, the inducer was added as follows 25 mM, 50 mM,
report on the process development for nitrilase mediated synthesis of 4- 75 mM, 100 mM and 200 mM, respectively at 0 h. To sets 7, 8 and 9,
HPAA from 4-HPAN. 50 mM of the inducer was added in the medium at regular time inter-
vals (4, 8, 12 h). Furthermore, 50 mM of isobutyronitrile was fed in the
2. Materials and methods culture, at time intervals of 0, 4 h (set 10); 0, 8 h (set 11); 0, 12 h (set
12); 0, 4, 8 h (set 13) and 0, 4, 8, 12 h (set 14). In set 15 (high ex-
2.1. Chemicals and media components ponential level), the isobutyronitrile was fed at concentrations of 25,
50, 75, 100 mM at 0, 4, 8, 12 h of incubation.
The medium components used for the culture of bacterium were
purchased from Hi Media, India. The nitriles, amides and acids used in 2.7. Optimization of reaction conditions for biotransformation of 4-HPAN
the present study were purchased from Lancaster Synthesis, England. to 4-HPAA by whole cell nitrilase of A. faecalis MTCC 12629
High Performance Liquid Chromatography (HPLC) grade solvents and
water were purchased from Merck, India for performing HPLC. To enhance the activity of nitrilase enzyme, various reaction para-
meters were optimized before proceeding to the synthesis of 4-hydro-
2.2. Microorganism and culture conditions xyphenylacetic acid (4-HPAA). 4-HPAN hydrolyzing activity of nitrilase
was determined in various buffer systems (100 mM) i.e. potassium
The bacterial strain Alcaligenes faecalis MTCC 12629 obtained from phosphate (6.0–8.0), sodium phosphate (6.0–8.0), sodium carbonate
MTCC (Microbial Type Culture Collection and Gene Bank) Institute of (9.0–10.0), citrate (4.0–6.0), tris−HCl (5.0–8.0), borate (7.0–9.0) and
Microbial Technology, Chandigarh, India served as the source of ar- borax buffer (10–11). The effect of temperature (25°C–60°C), thermal
ylacetonitrilase. The bacterial culture was maintained on nutrient agar. stability and substrate specificity on nitrilase activity was studied. To
Pre-culture was prepared by inoculating a loop full of A. faecalis MTCC study the effect of product on nitrilase activity, 10 to 40 mM of 4-HPAA
12629 culture in the nutrient broth (25 ml). Medium for the production was varied in the reaction mixture and the inhibition constant (Ki) was
of arylacetonitrilase of A. faecalis MTCC 12629 comprised yeast extract determined. Lineweaver-Burk plot was constructed to calculate the ki-
(10 g/l), tryptone (11 g/l), NaCl (5 g/l), pH 7.0, inoculum 2.75% (v/v) netic parameters and to investigate the type of inhibition involved by
and isobutyronitrile (50 mM) as inducer. Production medium (50 ml) adding 0, 10, 15 and 20 mM of 4-HPAA with varied substrate (4-HPAN)
was seeded with 1.37 ml (18 h) of pre-culture in 250 ml Erlenmeyer concentration (5 mM–50 mM) in the reaction mixture.
flask. This was grown for 24 h at 30°C and the culture was centrifuged
at 10000 g for 10 min, followed by washing of the cells with 100 mM 2.8. Bioprocess development
potassium phosphate buffer (pH 7.0). The cells were suspended in the
same buffer and stored at 4°C. 2.8.1. Time course of nitrilase reaction at different substrate concentration
Concentration of 4-hydroxyphenylacetonitrile in the reaction mix-
2.3. Nitrilase assay ture (1 ml) was varied from 5 mM to 150 mM and the enzyme activity
was assayed at intervals of 30 min until 160 min in order to study the
Nitrilase activity in the resting cells was assayed in the reaction effect of substrate concentration on nitrilase activity.
mixture (1 ml) containing potassium phosphate buffer (100 mM, pH
7.0), 4-hydroxyphenylacetonitrile (1 mM) and resting cells (0.32 mg 2.8.2. Effect of enzyme concentration
dcw), incubated at 30°C in a water bath. After 30 min, the reaction was The whole cell enzyme concentration was varied (6 U/ml–21 U/ml)
terminated by 0.1 N HCl (1 ml), and ammonia formed in the reaction with 40 mM substrate concentration and the samples were withdrawn
was estimated using phenyl-hypochlorite method [25]. One unit of after every 30 min upto 120 min for HPLC analysis.
nitrilase activity is defined as the amount of enzyme (mg dry cell
weight) required to release 1 μmol of ammonia from the hydrolysis of 4- 2.8.3. Whole cell enzyme and substrate ratio
HPAN per min. All experiments were carried out in triplicates and The effect of increasing whole cell enzyme with respect to the
average values were calculated for the experiment followed by applying substrate (4-HPAN) concentration on the formation of product (4-
the standard deviation for the mean values. HPAA) was observed by taking different combinations of substrate
concentration (mM) and biocatalyst amount (U/ml): 40 mM : 18 U/ml,
2.4. Analytical detection of substrate and product 50 mM : 22 U/ml and 60 mM : 27 U/ml and 80 mM : 36 U/ml in
K2HPO4/KH2PO4 buffer (50 mM, pH 7.0). The reaction took place at
HPLC system using a LiChrosorb®RP-18 column (4.6 × 150 mm) at a 45°C for 160 min and the product formed was estimated at an interval
flow rate of 1.0 ml/min and wavelength of 210 nm with the mobile of 30 min by HPLC.
phase acetonitrile: water (65:35), was used to detect and quantify 4-
hydroxyphenylacetonitrile (4-HPAN) and 4-hydroxyphenylacetic acid 2.8.4. Fed batch at 50 ml scale (40 mM 4-hydroxyphenylacetonitrile/
(4-HPAA) in the reaction mixture. HPLC analysis showed retention 30 min)
times of 1.28 and 2.53 for 4-HPAN and 4-HPAA, respectively. 40 mM substrate concentration was chosen along with 18 U/ml
whole cell enzyme and fed for 5 successive feedings at an interval of
2.5. Selection of inducer 30 min each, under optimized conditions in 50 ml reaction.

To select the best inducer in terms of generation of biomass and 2.8.5. Fed batch at 50 ml scale (40 > 35 > 25 > 20 mM 4
nitrile hydrolyzing activity, various nitriles, amides and acids (40 mM, hydroxyphenylacetonitrile/30 min)
filtered through Millipore filter) were added to the production medium It was observed that nitrilase encountered inhibition after third
for the induction of nitrilase. The culture was harvested after 24 h in feeding when substrate was fed at a concentration of 40 mM in 5 suc-
order to detect specific activity of nitrilase in the resting cells. cessive feedings. Therefore, substrate was added at lower concentration

118
N. Thakur et al. Process Biochemistry 73 (2018) 117–123

Fig. 1. Thermostability profile of whole cell nitrilase of A. faecalis MTCC 12629 (A) Relative activity of the enzyme at 35°C, 40°C, 45°C and 50°C at different time
intervals (B) Plot of ln Eo/E vs time interval, where Eo is the enzyme activity at 0 h and E is the activity after time interval of 6 h. Half-lives (Thalf) of the whole cell
nitrilase at 40°C, 45°C and 50°C were calculated to be 45 h, 36 h and 13 h respectively.

for 5 feedings in decreasing order as follows 40 mM : 18 U/ml, 35 mM : stationary phase of this microorganism to 26 h. Furthermore, the ad-
18 U/ml, 30 mM : 18 U/ml, 25 mM : 18 U/ml and 20 mM : 18 U/ml, at dition of isobutyronitrile in high concentration at 0 h (set 4, 5, 6)
an interval of 30 min in 50 ml reaction. proved to be toxic to the cells of A. faecalis MTCC 12629. However,
addition of isobutyronitrile after 4 h (set 7), 8 h (set 8) and 12 h (set 9)
2.8.6. Scale up at 500 ml scale (40 > 35 > 30 > 25 > 20 mM 4- to the medium enhanced the induction of nitrilase activity in A. faecalis
hydroxyphenylacetonitrile/30 min) MTCC 12629. Feeding of isobutyronitrile at high concentration in late
Based on the results of the preceding reaction at 50 ml scale, the log phase of growth (set 15) inhibited the growth of the microorganism
reaction was scaled up to 500 ml in a 1.5 l Bioflow C-32 fermenter (New compared to other sets due to the toxicity of inducer to the cells.
Brunswick Scientific, USA) under optimized conditions (50 mM Addition of 50 mM isobutyronitrile at 4 h (set 7) resulted in maximum
K2HPO4/KH2PO4 buffer, pH 7.0), at 45°C. Five feedings of 4-HPAN induction of nitrilase activity (Supplementary Table S1, Fig. S1 A) and
were carried out at lower level, as per the previous experiment, in order growth of the present microorganism (Supplementary Fig. S1B).
to maximize the product formation. Therefore, 4 h and 50 mM isobutyronitrile proved to be the most sui-
table time and concentration of inducer, respectively. This approach
3. Results caused a 1.2-fold increase in nitrilase production.

3.1. Effect of inducer 3.3. Optimization of reaction conditions for biotransformation of 4-HPAN
to 4-HPAA by whole cell nitrilase of A. faecalis MTCC 12629
This experiment was conducted to investigate the effect of various
inducers (nitriles, amides, acids) on nitrilase induction. The experi- 3.3.1. Buffer system and ionic strength
mental result revealed aliphatic nitriles as the best inducers for induc- The results of nitrilase assay in seven buffer systems revealed po-
tion of A. faecalis MTCC 12629 nitrilase. Aromatic nitriles (benzonitrile, tassium phosphate buffer (pH 7) as the most suitable buffer for nitrilase
phenylacetonitrile), aryl nitriles (mandelonitrile), mandelic acid, acet- activity (0.25 U/mg dcw). The nitrilase also retained 50% activity in
onecyanohydrin and ε-caprolactum completely inhibited the growth of citrate buffer at pH 4.0. Optimum strength of potassium phosphate
A. faecalis MTCC 12629. Aliphatic nitriles such as isobutyronitrile, buffer was found to be 50 mM (0.25 U/mg dcw) for the activity of ni-
butyronitrile, propionitrile, adiponitrile and valeronitrile, as inducers, trilase. Above and below this strength of buffer, activity of nitrilase was
resulted in fairly high biomass and induction of nitrilase. Although declined. Thus, 50 mM potassium phosphate buffer (pH 7) was chosen
certain amides such as acrylamide, N-methylacetamide and 2-cyano- for successive experiments.
pyridine supported the growth of the organism, yet these did not induce
nitrilase. Isobutyronitrile emerged as the most appropriate inducer in 3.3.2. Thermal/operational stability
terms of biomass yield and nitrilase induction, followed by butyronitrile Assay of nitrilase activity at various temperatures revealed 45°C to
and adiponitrile (Supplementary Table S1). be an optimum temperature for enzyme activity (0.28 U/mg dcw).
Although this enzyme was found to be active in the range of 25°C to
3.2. Isobutyronitrile (inducer) feeding for hyperinduction of nitrilase 55°C, yet a significant loss in nitrilase activity was observed above 55°C
(Fig. 1A). This enzyme retained its nitrile degrading activity at 35°C,
Among the different sets of nitrilase induction by isobutyronitrile in 40°C and 45°C for more than 24 h and was deactivated abruptly at 60°C
A. faecalis MTCC 12629, set 1 (control, without induction) caused within an hour. Half-life (t1/2) of nitrilase was calculated from plots of
negligible induction of nitrilase activity, which showed the inducible log relative activity versus time at 40°C (45 h), 45°C (36 h) and 50°C
nature of this enzyme. In set 1, the growth profile of A. faecalis MTCC (13 h) (Fig. 1B). This enzyme was found to be very stable at 30°C for
12629 exhibited stationary phase at 20 h of incubation, but addition of more than 15 days without any loss in nitrile hydrolyzing activity.
isobutyronitrile at 0 h to the culture medium (set 3) delayed the Maximum activity as well as operational stability of the nitrilase were

119
N. Thakur et al. Process Biochemistry 73 (2018) 117–123

Fig. 2. Effect of substrate and product concentration on whole


cell nitrilase activity using 18 U/ml of activity (A)
Determination of inhibition constant (Ki) with the addition of
product (4-HPAA) ranging from 10 to 40 mM in 1 ml reaction
volume (B) Lineweaver-Burk plot: symbol ♦ depicts the KM
20 mM and Vmax 2 U/mg dcw of whole cell nitrilase for 4-
HPAN and symbols ■, ▲ and x represent 4-hydro-
xyphenylacetic acid inhibition kinetics at product concentra-
tion 10 mM, 15 mM and 20 mM, respectively.

observed at 45°C, therefore subsequent experiments for the develop- 50 mM 4-HPAN. Therefore, 40 mM substrate concentration was selected
ment of nitrilase mediated process for the conversion of 4-HPAN to 4- for further bioprocess experiments. Complete loss of enzyme activity
HPAA were carried out at this temperature. was observed at 150 mM 4-HPAN in the reaction containing 3 U/ml of
nitrilase activity.
3.3.3. Substrate specificity
Isobutyronitrile induced whole cell nitrilase of A. faecalis MTCC 3.4.2. Effect of enzyme concentration
12629 was used to screen various aliphatic, aromatic, heterocyclic and With the increase in biocatalyst amount (6 U/ml-21 U/ml), the rate
arylacetonitriles, which gave an overview of the clear preference of of product formation was also increased with shorter incubation time.
present nitrilase towards aryacetonitriles. Negligible activity was ob- The reaction containing 18 U/ml whole cell enzyme and 40 mM sub-
served with other classes of nitriles (aromatic, aliphatic, dinitriles, strate (4-HPAN) resulted in maximum conversion of substrate into
heterocyclic). 4-hydroxyphenylacetontrile (0.28 U/mg dcw) and 4- product in 30 min of incubation at 45°C. Addition of more biocatalyst
aminophenylacetonitrile (0.29 U/mg dcw) emerged as the best sub- did not enhance the product formation in shorter incubation time
strates for nitrilase activity followed by mandelonitrile and phenylgly- (Fig. 3).
cinonitrile. Amide hydrolyzing activity was not exhibited by A. faecalis
MTCC 12629 when reactions were carried out with different amides as 3.4.3. Whole cell enzyme and substrate ratio
substrate. The experiment conducted to investigated the effect of increasing
amount of whole cell enzyme with respect to the substrate concentra-
3.3.4. Product inhibition and kinetic parameters tion deduced 40 mM substrate concentration and 18 U/ml combination
Nitrilase enzyme started losing its activity when the product as the most appropriate for the highest conversion. Thus, the sub-
(10–40 mM) was directly added at 0 h in the reaction mixture (Fig. 2A), sequent scales up reactions were carried out with 40 mM substrate
whereas gradual formation of 4-HPAA from 4-HPAN in the reaction did concentration and 18 U/ml of nitrilase (Fig. 4). It was also inferred from
not show inhibitory effect at the same concentration of product formed this experiment that the proportional increase in biocatalyst amount
(data not shown). Inhibition constant (Ki) was calculated to be 18 mM with the substrate did not show higher conversion rate due to inhibition
from the plot by taking varied concentration of product versus nitrilase of nitrilase by high substrate loading.
activity at optimized substrate concentration and 18 U/ml of enzyme
(Fig. 2A). Michaelis constant (Km) and reaction velocity (Vmax) of ni- 3.4.4. Fed batch at 50 ml scale (40 > 35 > 30 > 25 > 20 mM 4-
trilase with 4-hydroxyphenylacetonitrile were calculated to be 20 mM hydroxyphenylacetonitrile/30 min)
and 2 U/mg dcw, respectively from Lineweaver-Burk plot (Fig. 2B). Fed batch approach applied at 50 ml scale with the addition of 18
Study of inhibition kinetics showed the inhibitory effect of 4-HPAA on U/ml whole cell nitrilase and 40 mM substrate resulted in steady de-
enzyme with the apparent value of Km as 40, 45, 50 mM and Vmax as cline in the rate of conversion of substrate after the first feeding of the
1.6, 1.5, 1.1 U/mg at 10, 15 and 20 mM product concentration, re- substrate (40 mM). Thus, the substrate was added in lower amount in 5
spectively (Fig. 2B). feedings, at an interval of 30 min in order to achieve maximum yield. A
total of 5 feedings of the substrate i.e. 40 mM, 35 mM, 30 mM, 25 mM
3.4. Bioprocess development and 20 mM, were made which resulted in complete conversion of the
substrate into product with accumulation of 150 mM 4-HPAA.
3.4.1. Time course of enzyme at different substrate concentration
Effect of 4-hydroxyphenylacetonitrile concentration revealed in- 3.4.5. Scale up at 500 ml scale (40 > 35 > 30 > 5 > 20 mM 4
hibitory effect on the nitrilase activity at higher concentration, with the hydroxyphenylacetonitrile/30 min)
whole cell enzyme concentration of 3 U/ml in the reaction. It was ob- Addition of lower concentration of substrate in five feedings led to
served that with the increase in substrate concentration 100% conversion of substrate into product (Fig. 5). After complete
(10 mM–40 mM), formation of product slowly increased with the pro- conversion in 5 feedings, the product formed (150 mM) was recovered
gression of time. A sharp decline in nitrilase activity was observed after by lowering the pH of the reaction. The white precipitates were

120
N. Thakur et al. Process Biochemistry 73 (2018) 117–123

Fig. 3. Effect of whole cell nitrilase concentration on


the conversion of 40 mM 4-hydroxyphenylacetonitrile
to 4-hydroxyphenylacetic acid in the reaction con-
taining 50 mM potassium phosphate buffer (pH 7.0) at
45°C. Reaction was carried out with specified con-
centration of whole cell nitrilase as per the legend: 6
U/ml (♦), 9 U/ml (■), 12 U/ml (▲), 15 U/ml (x), 18
U/ml (●) and 21 U/ml (●). All the measurements
were done in triplicates and the data shown are
means ± standard deviation (SD).

separated by filtration and dried using heat. HPLC analysis of recovered parameters were studied to enhance the expression and activity of ni-
product confirmed the 96% purity of 4-HPAA when compared with the trilase from A. faecalis MTCC 12629. Kinetics of nitrilase production
standard of 4-HPAA. The purified product was also analysed through revealed the inducible nature of the enzyme unlike constitutive nitrilase
analysis which further confirmed the formation of 4-hydro- of Alcaligenes sp. ECU0401 [26], Bacillus subtilis ZJB-063 [27] and
xyphenylacetic acid (Supplementary Fig. S2A & S2B). The catalytic and Klebsiella ozaenae [28]. Short chain aliphatic nitriles proved to be the
volumetric productivity were calculated to be 4.13 g/g dcw/h and 23 g/ potential inducers for nitrilase of A. faecalis MTCC 12629. The pro-
l, respectively. duction of nitrilase of A. faecalis MTCC 12629 was observed to be
maximum with isobutyronitrile as an inducer, which was similar to the
4. Discussion nitrilase from R. rhodochrous PA-34 [29], N. globerula NHB-2 [7], Gor-
donia terrae [30] and R. rhodochrous J1 [31]. Growth of the present
The present work was carried out with the focus on exploring the microorganism was retarded in the presence of nitriles in the produc-
arylacetonitrilase activity of A. faecalis MTCC 12629 for the synthesis of tion medium compared to the medium without inducer, due to toxicity
4-hydroxyphenylacetic acid. Growth kinetics and physiological of nitriles. A similar trend was followed by the reported nitrilase of

Fig. 4. Effect of whole cell enzyme and sub-


strate concentration for maximum conversion
of 4-hydroxyphenylacetonitrile to 4-hydro-
xyphenylacetic acid in 50 mM potassium
phosphate buffer (pH 7.0) at 45°C. Symbols ♦,
▲, x and ● represent combination of whole
cell enzyme and substrate concentration: 18 U/
ml:40 mM; 22 U/ml:50 mM; 27 U/ml:60 mM
and 36 U/ml:70 mM, respectively. Dotted lines
represent the conversion of substrate and solid
lines represent the formation of product during
the reaction. Data represent means ± SD of
triplicate determinations.

121
N. Thakur et al. Process Biochemistry 73 (2018) 117–123

within the temperature range of 30–55°C with the half-life of 45 h, 36 h,


13 h and 2 h at 40°C, 45°C, 50°C and 55°C respectively. The ar-
ylacetonitrilase of P. putida had half-life of 76 min at 40°C and 9 min at
50°C [17]. Substrate inhibition at higher concentration and product
inhibition of nitrilases are well reported earlier [13,10,40,41] which
are similar to the results of present study. Therefore, the fed batch
method was preferred for the synthesis of 4-HPAA from 4- HPAN and a
similar strategy has been considered in the studies on nitrilase reported
by [16,13,10,42]. Most of the studies on arylacetonitrilases are related
to their characterization and exploration to form commercially im-
portant arylacetic acid such as mandelic acid [18,43–47]. Previously,
the bacterial strains such as P. putida MTCC 5110 (0.39 g/g dcw) [17],
A. faecalis ECU0401 (3.8 g/g dcw) [26] and Alcaligenes sp. MTCC 10675
(3.9 g/g dcw) [13,16], possessing arylacetonitrilases, were used to
synthesize mandelic acid. Nitrilase mediated biotransformation process
was also developed for the synthesis of phenylacetic acid from pheny-
lacetonitrile by using recombinant Escherichia coli M15 harbouring a
Fig. 5. Formation of 4-hydroxyphenylacetic acid in 500 ml fed batch reaction
double mutant MG nitrilase (I113 M/Y199 G) from Burkholderia cen-
with 18 U/ml of whole cell biocatalyst and five feedings of substrate 4-hydro-
xyphenylacetonitrile at an interval of 30 min. Extent of formation of 4-hydro- ocepacia J2315 and whole cell nitrilase of Alcaligenes sp. MTCC 10675
xyphenylacetic acid and conversion of 4-hydroxyphenylacetonitrile in the re- [48,49]. However, fed batch synthesis of 4-hydroxyphenylacetic acid
action is denoted by the symbols (■) and (▲) respectively. Dotted lines with has not been carried out so far. Fed batch synthesis at 500 ml scale
symbol ▲ represent 40 mM substrate feeding per 30 min interval and solid resulted in 23 g/l 4-HPAA production, with a catalytic productivity of
lines with symbol ▲ denote five feedings of substrate: first feeding (40 mM), 4.13 g/g dcw/h by utilizing whole cell nitrilase of A. faecalis MTCC
second (35 mM), third (30 mM), fourth (25 mM) and fifth (20 mM). Upper and 12629. This is the first report on the synthesis of 4-HPAA by employing
lower ▲ in the dotted and solid lines depict substrate concentration after and whole cells nitrilase enzyme with better thermal and operational sta-
before the addition of 4-hydroxyphenylacetonitrile per 30 min respectively. bility which can be very useful for industrial scale biotransformation
processes. Thus, nitrilase mediated route can be an alternative to che-
Nocardia globerula NHB-2 [10]. Isobutyronitrile feeding at varied time mical routes for synthesis of such an important acid as mentioned in the
intervals resulted in enhanced production of nitrilase from A. faecalis present investigation. Furthermore, various strategies can be applied to
MTCC 12629 which was decreased with the progression of time, and enhance the product formation through immobilization of enzyme and
high level of nitrilase expression was achieved in 21 h compared to N. chemical mutagenesis.
globerula NHB-2 (30 h, isobutyronitrile) [32], Gordonia terrae mutant E9
(36 h, isobutyronitrile) [30], R. rhodochrous K22 (120 h, iso- Conflict of interest
valeronitrile) [33], R. rhodochrous J1 (120 h, ε-caprolactam) [31], and
Alcaligenes sp. MTCC 10675 (24 h, isobutyronitrile) [16]. The increase The authors declare no conflict of interest.
in nitrilase activity was observed to be 1.2-fold for A. faecalis MTCC
12629, 1.5-fold for Alcaligenes sp. MTCC 10675, 1.2 fold for G. terrae Acknowledgements
mutant E9 and 1.1-fold for P. putida nitrilase [16,30,17] from inducer
feeding experiment. A number of nitrilases have been reported for their The authors acknowledge the University Grant Commission (UGC),
substrate specificity as aromatic, aliphatic, heterocyclic, but only a few New Delhi for financial support in the form of Senior Research
of the nitrilases are reported to degrade arylacetonitriles. The nitrilase Fellowship to Ms. Neerja Thakur under UGC-Special Assistance
of A. faecalis MTCC 12629 in the present study preferably hydrolyzed Programme and Faculty Fellowship to Prof. T.C. Bhalla under UGC-BSR
arylacetonitriles similar to that of P. fluorescens DSM 7155 [34], Bacillus scheme. The computational facility availed at Bioinformatics Centre,
subtilis ZJB-063 [27], P. fluorescens EBC191 [35] and Alcaligenes sp. Himachal Pradesh University is also duly acknowledged.
MTCC 10675 [16]. However, nitrilase of A. faecalis MTCC 10757 and
Alcaligenes sp. ECU0401 are reported to degrade aliphatic and aromatic Appendix A. Supplementary data
nitriles, respectively [26,36]. To harness the maximum activity of en-
zyme for transformation of 4-HPAN to 4-HPAA, the present enzyme was Supplementary material related to this article can be found, in the
characterized by manipulating various reaction parameters. The ar- online version, at doi:https://doi.org/10.1016/j.procbio.2018.07.012.
ylacetonitrilase activity of present nitrilase was recorded as maximum
in potassium phosphate buffer pH 7, and was found to be stable from References
pH 6 to 8, compared to the optimum pH and stability of arylacetoni-
trilase of Alcaligenes sp. MTCC 10675 (pH 6, 6-7), A. faecalis ATCC 8750 [1] H. Sun, W. Gao, H. Fan, H. Wang, D. Wei, Cloning, purification and evaluation of
(pH 7.5, 6.5–8) and P. putida (pH 7, 6.5–8) [16,37,17]. Nitrilase of A. the enzymatic properties of a novel arylacetonitrilase from Luminiphilus syltensis
NOR5-1B: a potential biocatalyst for the synthesis of mandelic acid and its deri-
faecalis MTCC 12629 exhibited highest activity at 45°C whereas the vatives, Biotechnol. Lett. 37 (2015) 1655–1661.
temperature optima of 40°C, 55°C, 45°C and 40–45°C have been re- [2] N.N. Sharma, M. Sharma, T.C. Bhalla, An improved nitrilase-mediated bioprocess
ported for arylacetonitrilase of P. putida [17], P. fluorescens DSM 7155 for synthesis of nicotinic acid from 3-cyanopyridine with hyperinduced Nocardia
globerula NHB-2, J. Ind. Microbiol. Biotechnol. 38 (2011) 1235–1243.
[34], Alcaligenes sp. MTCC 10675 [16] and A. faecalis ATCC 8750 [37], [3] T. Sugai, T. Yamazaki, M. Yokoyama, H. Ohta, Biocatalysis in organic synthesis: the
respectively. Thermostability is an important criteria and a desirable use of nitrile and amide hydrolysing microorganisms, Biosci. Biotechnol. Biochem.
requirement for biotransformation reactions as it is related to the sta- 61 (1997) 1419–1427.
[4] Y.P. Xue, Y.K. Yang, S.Z. Lv, Z.Q. Liu, Y.G. Zheng, High-throughput screening
bility of biocatalyst at a particular temperature for longer time dura- methods for nitrilases, Appl. Microbiol. Biotechnol. 100 (2016) 3421–3432.
tions [38]. The previous reports on bacterial arylacetonitrilases from [5] T.C. Bhalla, V. Kumar, V. Kumar, Enzymes of aldoxime–nitrile pathway for organic
Alcaligenes sp. MTCC 10675, Bradyrhizobium japonicum USDA110, and synthesis, Rev. Environ. Sci. Biotechnol. 17 (2018) 229–239.
[6] T.C. Bhalla, V. Kumar, V. Kumar, N. Thakur, Savitri, Nitrile metabolizing enzymes
P. putida revealed their stability between 30 to 50°C [16,39,17].
in biocatalysis and biotransformation, Appl. Biochem. Biotechnol. (2018) 1–22,
The whole cell nitrilase in the present work was active and stable https://doi.org/10.1007/s12010-018-2705-7.
[7] N.N. Sharma, M. Sharma, T.C. Bhalla, Nocardia globerula NHB-2 nitrilase catalysed

122
N. Thakur et al. Process Biochemistry 73 (2018) 117–123

biotransformation of 4-cyanopyridine to isonicotinic acid, AMB Express 2 of α-aminonitriles to optically active amino acids by a nitrilase of Rhodococcus
(2012) 25. rhodochrous PA-34, Appl. Microbiol. Biotechnol. 37 (1992) 184–190.
[8] R.A. Sheldon, I. Arends, U. Hanefeld, Green Chemistry and Catalysis, Wiley-VCH [30] V. Kumar, V. Kumar, N. Thakur, T.C. Bhalla, Bench scale synthesis of p-hydro-
Verlag, Weinheim, 2007. xybenzoic acid using whole-cell nitrilase of Gordonia terrae mutant E9, Bioprocess
[9] A. Agarwal, V.K. Nigam, A.S. Vidyarthi, Nitrilases - an attractive nitrile degrading Biosyst. Eng. 38 (2015) 1267–1279.
biocatalyst, Int. J. Pharm. Biol. Sci. Arch. 3 (2012) 232–246. [31] T. Nagasawa, T. Nakamura, H. Yamada, e-Caprolactam, a new powerful inducer for
[10] N.N. Sharma, S. Monica, T.C. Bhalla, An improved nitrilase mediated bioprocess for the formation of Rhodococcus rhodochrous J1 nitrilase, Arch. Micobiol. 155 (1990)
synthesis of nicotinic acid from 3-cyanopyridine with hyperinduced Nocardia glo- 13–17.
berula NHB-2, J. Ind. Microbiol. Biotechnol. 38 (2010) 1235–1243. [32] N.N. Sharma, M. Sharma, H. Kumar, T.C. Bhalla, Nocardia globerula NHB-2: bench
[11] V.K. Nigam, A.K. Khandelwal, R.K. Gothwal, M.K. Mohan, B. Choudhury, scale production of nicotinic acid, Proc. Biochem. 41 (2006) 2078–2081.
A.S. Vidyarthi, P. Ghosh, Nitrilase-catalysed conversion of acrylonitrile by free and [33] M. Kobayashi, N. Yanaka, T. Nagasawa, H. Yamada, Hpyerinduction of an aliphatic
immobilized cells of Streptomyces sp, J. Biosci. 34 (2009) 21–26. nitrilase by Rhodococcus rhodochrous K22, FEMS Microbiol. Lett. 77 (1991)
[12] M. Kobayashi, N. Yanaka, T. Nagasawa, H. Yamada, Purification and character- 121–124.
ization of a novel nitrilase of Rhodococcus rhodochrous K22 that acts on aliphatic [34] N. Layh, J. Parratt, A. Willetts, Characterization and partial purification of an en-
nitriles, J. Bacteriol. 172 (1990) 4807–4815. antioselective arylacetonitrilase from Pseudomonas fluorescens DSM 7155, J. Mol.
[13] V. Kumar, T.C. Bhalla, Transformation of p-hydroxybenzonitrile to p-hydro- Catal. B Enzym. 5 (1998) 467–474.
xybenzoic acid using nitrilase activity of Gordonia terrae, Biocatal. Biotransform. 31 [35] S. Baum, D.S. Williamson, T. Sewell, A. Stolza, Conversion of sterically demanding
(2013) 42–48. α, α-disubstituted phenylacetonitriles by the arylacetonitrilase from Pseudomonas
[14] D.S. Williamson, K. Dent, B.W. Weber, A. Varsani, J. Frederick, R.N. Thuku, fluorescens, Appl. Environ. Microbiol. 78 (2012) 48–57.
R.A. Cameron, J.H. van Heerden, D.A. Cowan, B.T. Sewell, Structural and bio- [36] Y.V.D. Nageshwar, G. Sheelu, R.R. Shambhu, H. Muluka, N. Mehdi, M.S. Malik,
chemical characterization of a nitrilase from the thermophilic bacterium, A. Kamal, Optimization of nitrilase production from Alcaligenes faecalis MTCC
Geobacillus pallidus RAPc8, Appl. Microbiol. Biotechnol. 88 (2010) 143–153. 10757 (IICT-A3): effect of inducers on substrate specificity, Bioproc. Biosyst. Eng.
[15] M. Wieser, K. Heinzmann, A. Kiener, Bioconversion of 2-cyanopyrazine to 5-hy- 34 (2011) 515–523.
droxypyrazine-2-carboxylic acid with Agrobacterium sp. DSM 6336, Appl. Microbiol. [37] K. Yamamoto, I. Fujimatsu, K.I. Komatsu, Purification and characterization of the
Biotechnol. 48 (1997) 174–176. nitrilase from Alcaligenes faecalis ATCC 8750 responsible for enantioselective hy-
[16] S.K. Bhatia, P.K. Mehta, R.K. Bhatia, T.C. Bhalla, Optimization of arylacetonitrilase drolysis of mandelonitrile, J. Ferment. Bioeng. 73 (1992) 425–430.
production from Alcaligenes sp. MTCC 10675 and its application in mandelic acid [38] J.S. Gong, Z.M. Lu, H. Li, J.S. Shi, Z.M. Zhou, Z.H. Xu, Nitrilases in nitrile bioca-
synthesis, Appl. Microbiol. Biotechnol. 98 (2013) 83–94. talysis: recent progress and forthcoming research, Microb. Cell Fact. 11 (2012)
[17] A. Banerjee, P. Kaul, U. Banerjee, Purification and characterization of an en- 142–148.
antioselective arylacetonitrilase from Pseudomonas putida, Arch. Microbiol. 184 [39] D. Zhu, C. Mukherjee, Y. Yang, B.E. Rios, D.T. Gallagher, N.N. Smith, E.R. Biehl,
(2006) 407–418. L. Hua, A new nitrilase from Bradyrhizobium japonicum USDA 110 gene cloning,
[18] Z.Q. Liu, X.H. Zhang, Y.P. Xue, M. Xu, Y.G. Zheng, Improvement of Alcaligenes biochemical characterization and substrate specificity, J. Biotechnol. 133 (2008)
faecalis nitrilase by gene site saturation mutagenesis and its application in stereo- 327–333.
specific biosynthesis of (R)-(−)-mandelic acid, J. Agric. Food Chem. 62 (2014) [40] S. Prasad, A. Misra, V.P. Jangir, A. Awasthi, J. Raj, T.C. Bhalla, A propionitrile-
4685–4694. induced nitrilase of Rhodococcus sp. NDB 1165 and its application in nicotinic acid
[19] J.M. Cloward, W.M. Shafer, MtrR control of a transcriptional regulatory pathway in synthesis, World J. Microbiol. Biotechnol. 23 (2006) 345–353.
Neisseria meningitidis that influences expression of a gene (nadA) encoding a vaccine [41] J. Raj, N. Singh, S. Prasad, A. Seth, T.C. Bhalla, Bioconversion of benzonitrile to
candidate, PLoS One 8 (2013) e56097. benzoic acid using free and agar entrapped cells of Nocardia globerula NHB-2, Acta
[20] M.M. Metruccio, E. Pigozzi, D. Roncarati, F. Berlanda Scorza, N. Norais, S.A. Hill, Microbiol. Immunol. Hung. 54 (2007) 79–88.
V. Scarlato, I. Delany, A novel phase variation mechanism in the meningococcus [42] Z.J. Zhang, J.H. Xu, Y.C. He, L.M. Ouyang, Y.Y. Liu, T. Imanaka, Efficient pro-
driven by a ligand-responsive repressor and differential spacing of distal promoter duction of (R)-(−)-mandelic acid with highly substrate/product tolerant and en-
elements, PLoS Pathog. 5 (2009) e1000710. antioselective nitrilase of recombinant Alcaligenes sp, Process Biochem. 45 (2010)
[21] K.C. Wen, C.S. Chang, Y.C. Chien, H.W. Wang, W.C. Wu, C.S. Wu, H.M. Chiang, 887–891.
Tyrosol and its analogues inhibit α-melanocyte-stimulating hormone induced [43] L. Martinkova, V. Kren, Biocatalytic production of mandelic acid and analogues: a
melanogenesis, Int. J. Mol. Sci. 14 (2013) 23420–23440. review and comparison with chemical processes, Appl. Microbiol. Biotechnol. 102
[22] M. Mutsukado, S. Yamada, Methods for preparing 4-hydroxyphenylacetic acids, (2018) 3893–3900, https://doi.org/10.1007/s00253-018-8894-8.
(1983) United States Patent 4412082. [44] H.L. Wang, H.Y. Fan, H.H. Sun, L. Zhao, D.Z. Wei, Process development for the
[23] J.C. Vallejos, Y. Christidis, Preparation process for hydroxyphenylacetic acids, production of (R)-(−)-mandelic acid by recombinant Escherichia coli cells harboring
(1995) United States Patent US005395964A. nitrilase from Burkholderia cenocepacia J2315, Org. Process Res. Dev. 19 (2015)
[24] N. Agerbirk, S.I. Warwick, P.R. Hansen, C.E. Olsen, Sinapis phylogeny and evolu- 2012–2016.
tion of glucosinolates and specific nitrile degrading enzymes, Phytochemistry 69 [45] Z.J. Zhang, H.L. Yu, T. Imanaka, J.H. Xu, Efficient production of (R)-(−)-mandelic
(2008) 2937–2949. acid by isopropanol-permeabilized recombinant E. coli cells expressing Alcaligenes
[25] J.K. Fawcett, J.E. Scott, A rapid and precise method for the determination of urea, J. sp. nitrilase, Biochem. Eng. J. 95 (2015) 71–77.
Clin. Pathol. 13 (1960) 156–159. [46] S.C. Naik, P. Kaul, B. Barse, A. Banerjee, U.C. Banerjee, Studies on the production of
[26] Z.J. Zhang, J.H. Xu, Y.C. He, L.M. Ouyang, Y.Y. Liu, Cloning and biochemical enantioselective nitrilase in a stirred tank bioreactor by Pseudomonas putida MTCC
properties of a highly thermostable and enantioselective nitrilase from Alcaligenes 5110, Bioresour. Technol. 99 (2008) 26–31.
sp. ECU0401 and its potential for (R)-(−)-mandelic acid production, Bioproc. [47] R. Singh, A. Banerjee, P. Kaul, B. Barse, U.C. Banerjee, Release of an en-
Biosyst. Eng. 34 (2011) 315–322. antioselective nitrilase from Alcaligenes faecalis MTCC 126: a comparative study,
[27] Y.G. Zheng, J. Chen, Z.Q. Liu, M.H. Wu, L.Y. Xing, Y.C. Shen, Isolation, identifi- Bioprocess Biosyst. Eng. 27 (2005) 415–424.
cation and characterization of Bacillus subtilis ZJB-063, a versatile nitrile-converting [48] H. Fan, L. Chen, H. Sun, H. Wang, Q. Liu, Y. Ren, D. Wei, Development of nitrilase-
bacterium, Appl. Microbiol. Biotechnol. 77 (2008) 985–993. mediated process for phenylacetic acid production from phenylacetonitrile, Chem.
[28] D.M. Stalker, L.D. Malyj, K.E. McBride, Purification and properties of a nitrilase Pap. 71 (2017) 1985–1992.
specific for the herbicide bromoxynil and corresponding nucleotide sequence ana- [49] S.K. Bhatia, D. Kumar, R.K. Bhatia, T.C. Bhalla, Bench scale production of pheny-
lysis of the bxn gene, J. Biol. Chem. 263 (1988) 6310–6314. lacetic acid using Alcaligenes sp. MTCC 10675, Int. J. Univ. Pharm. Life. Sci. 2
[29] T.C. Bhalla, M. Miura, A. Wakamoto, Y. Ohba, K. Furuhashi, Asymmetric hydrolysis (2013).

123

Vous aimerez peut-être aussi