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review article
mechanisms of disease
Glycolysis
Fatty-acyl–CoA
Alanine Pyruvate Lactate
CPT-I
FAD
Citrate
Oxaloacetate
TCA cycle
Isocitrate
FADH2
a-Ketoglutarate
H+
ETF
Malate
NADH Succinyl-CoA
I II CoQ III IV V
H+ H+ Cytochrome c H+ H+
A D-loop region
Leu(UUR)
ND1 Glu
ND6
Ile
Gln
Met
ND2 ND5
Trp
Ala Leu (CUN)
Asn
Cys Ser (AGY)
Tyr His
COXI
Ser(UCN) ND4
Asp
Arg
Gly ND4L
Lys
COXII
ND3
A8
A6 COXIII
Succinate Fumarate
Matrix O2 H2O ADP ATP
Inner ND1 ND2 ND3 COXI
Cyt b COXII A8
mitochondrial ND6 ND4L
membrane e¡ COXIII A6
ND5 ND4 e¡ e¡
CoQ
Intermembrane
Cyt c
space
Complex I Complex II Complex III Complex IV Complex V
NDUFS1, NDUFS2, SDHA, SDHB, BCS1L COX10, COX15,
NDUFS4, NDUFS7, SDHC, SDHD Leigh’s syndrome SCO1, SCO2, SURF1
NDUFS8, NDUFV1 Leigh’s syndrome GRACILE syndrome Leigh’s syndrome
Leigh’s syndrome Paraganglioma Hepatopathy
Leukodystrophy Pheochromocytoma Cardioencephalomyopathy
Leukodystrophy and tubulopathy
No. of mtDNA-
7 0 1 3 2
encoded subunits
No. of nDNA- ∼39 4 10 10 ∼14
encoded subunits
Parkinsonism,
aminoglycoside-induced deafness
LS, MELAS, MELAS,
multisystem disease myoglobinuria Myopathy,
PEO
Cardiomyopathy Cardiomyopathy,
ECM
PEO, LHON, MELAS,
F ECM, LHON, myopathy,
myopathy, cardiomyopathy,
diabetes and deafness V 12s PT cardiomyopathy, MELAS
16S and parkinsonism
LHON Cyt b
L1 Cardiomyopathy,
Myopathy, cardiomyopathy, ECM
E
PEO LHON, MELAS,
ND1
Myopathy, MELAS diabetes,
ND6
I LHON and dystonia
Myopathy, lymphoma Q
M
Cardiomyopathy,
LS, MELAS
LHON
ND2 ND5
LS, ataxia,
chorea, myopathy Cardiomyopathy, ECM,
W
PEO A PEO, myopathy,
N L2 sideroblastic anemia
Myopathy, C S2
PEO Y H Diabetes and deafness
ECM
PEO COXI ND4 LHON, myopathy,
Myoglobinuria, LHON and dystonia
motor neuron disease, S1
sideroblastic anemia D ND4L
COXII
ND3 R
PPK, deafness, A8
Cardiomyopathy, K COXIII G LHON
MERRF–MELAS A6
myoclonus
Progressive myoclonus,
Myopathy, epilepsy, and optic atrophy
multisystem disease,
NARP, MILS, Cardiomyopathy,
encephalomyopathy
FBSN SIDS, ECM
Cardiomyopathy LS, ECM,
PEO, MERRF, myoglobinuria
MELAS, deafness
Figure 3. Mutations in the Human Mitochondrial Genome That Are Known to Cause Disease.
Disorders that are frequently or prominently associated with mutations in a particular gene are shown in boldface. Diseases due to mutations
that impair mitochondrial protein synthesis are shown in blue. Diseases due to mutations in protein-coding genes are shown in red. ECM de-
notes encephalomyopathy; FBSN familial bilateral striatal necrosis; LHON Leber’s hereditary optic neuropathy; LS Leigh’s syndrome; MELAS
mitochondrial encephalomyopathy, lactic acidosis, and strokelike episodes; MERRF myoclonic epilepsy with ragged-red fibers; MILS mater-
nally inherited Leigh’s syndrome; NARP neuropathy, ataxia, and retinitis pigmentosa; PEO progressive external ophthalmoplegia; PPK pal-
moplantar keratoderma; and SIDS sudden infant death syndrome.
Mutations in mtDNA can affect specific proteins mitochondrial encephalomyopathy, lactic acidosis,
of the respiratory chain or the synthesis of mito- and strokelike episodes (MELAS) syndrome, but
chondrial proteins as a whole (mutations in tRNA they cause other syndromes as well. Conversely, mu-
or rRNA genes, or giant deletions). There is no tations in different genes can cause the same syn-
straightforward relation between the site of the mu- drome; MELAS, again, is a prime example (Fig. 3).
tation and the clinical phenotype, even with a muta- There are exceptions: virtually all patients who have
tion in a single gene. For example, mutations in the the myoclonus epilepsy with ragged-red fibers
tRNALeu(UUR) gene are usually associated with the (MERRF) syndrome have mutations in the tRNALys
* *
* *
* *
A B
Figure 4. Serial Cross-Sections of Muscle from a Patient with the Kearns–Sayre Syndrome, Showing Increased Mitochondrial Activity
in Ragged-Red Fibers on Staining with Succinate Dehydrogenase (Asterisks in Panel A; ¬120) and the Absence of Activity on Staining
with Cytochrome c Oxidase (Asterisks in Panel B; ¬120).
gene,9 all patients with Leber’s hereditary optic ovum and embryo allows only a minority of mater-
neuropathy have mutations in ND genes,10 and nal mtDNAs to populate the fetus. On rare occa-
most mutations in the cytochrome b gene cause ex- sions a partially deleted mtDNA (or its progeny,
ercise intolerance.11 depending on when in oogenesis the deletion oc-
Because mitochondria are ubiquitous, every tis- curred) may slip through. A few mtDNAs with giant
sue in the body can be affected by mtDNA muta- deletions in the blastocyst can then enter all three
tions, which is why mitochondrial diseases are of- germ layers and result in the Kearns–Sayre syn-
ten multisystemic. Table 1 lists the most common drome (a multisystem disorder), segregate to the
mtDNA-related syndromes. Certain constellations hematopoietic lineage and cause Pearson’s syn-
of symptoms and signs are characteristic of these drome, or segregate to muscle and cause progres-
syndromes, and the diagnosis is relatively easy to es- sive external ophthalmoplegia (Table 1). In these
tablish in patients with these typical features. How- three cases, all mutated mtDNAs in the patient are
ever, as a result of heteroplasmy and the threshold identical, because they are a clonal expansion of
effect, different tissues harboring the same mtDNA the original molecule. Mutations in protein-coding
mutation may be affected to different degrees, thus genes of myogenic stem cells, presumably occur-
explaining the frequent occurrence of oligosymp- ring after germ-layer differentiation, result in isolat-
tomatic or asymptomatic carriers of the mutation ed myopathies11; 15 of the 17 known mutations in
within a family. Selective organ involvement can also the cytochrome b gene fall into this category (however,
occur, presumably as a result of skewed hetero- paternal inheritance of mtDNA in these cases must
plasmy (i.e., disproportionately high levels of the be ruled out6).
mutation in a given tissue), as in mitochondrial di- The pathogenesis of these disorders is unclear,
abetes,12 mitochondrial cardiomyopathies,13 mi- although impaired production of ATP most likely
tochondrial myopathies,8 and mitochondrial deaf- has a central role. This concept has been borne out
ness.14 by studies using cytoplasmic hybrid (“cybrid”) cell
Although most mtDNA-related diseases are ma- cultures, which are established human cell lines
ternally inherited, there are exceptions. The occur- that are depleted of their own mtDNA and then re-
rence of giant deletions is almost always sporadic populated with the patient’s mitochondria contain-
and probably takes place in oogenesis or early em- ing mutated genomes.16
bryogenesis. Oocytes from normal women contain The extraordinary variability of clinical presen-
about 150,000 mtDNA molecules, some of which tations can largely be attributed to the peculiar rules
may harbor deletions.15 A “bottleneck” between of mitochondrial genetics, especially heteroplasmy
Table 1. Clinical and Genetic Heterogeneity of Disorders Related to Mutations in Mitochondrial DNA (mtDNA).*
Mutation in
Giant Deletions in Mutation in Ribosomal Mutation in
Symptoms, Signs, and Findings mtDNA Transfer RNA RNA Messenger RNA
* Characteristic constellations of symptoms and signs are boxed. Plus signs indicate the presence of a symptom, sign, or
finding; minus signs the absence of a symptom, sign, or finding; and plus–minus signs the possible presence of a symp-
tom, sign, or finding. KSS denotes the Kearns–Sayre syndrome; PEO progressive external ophthalmoplegia; PS Pear-
son’s syndrome; MERRF myoclonic epilepsy with ragged-red fibers; MELAS mitochondrial encephalomyopathy, lactic
acidosis, and strokelike episodes; AID aminoglycoside-induced deafness; NARP neuropathy, ataxia, and retinitis pig-
mentosa; MILS maternally inherited Leigh’s syndrome; and LHON Leber’s hereditary optic neuropathy.
and the threshold effect. For example, different mu- However, mutations in complex II have also been
tational loads readily explain the different degrees associated with paragangliomas29,30 and pheochro-
of severity between the neuropathy, ataxia, and reti- mocytomas.31 Although its genetic basis remains
nitis pigmentosa syndrome and maternally inherit- unknown and it is likely to be heterogeneous, coen-
ed Leigh’s syndrome, two encephalomyopathies zyme Q10 deficiency is emerging as an important
caused by the same genetic defect in the ATPase 6 cause of autosomal recessive encephalomyopathies,
gene.17 What is difficult to explain is the distinct ranging from predominantly myopathic forms
“tissue proclivity” of seemingly similar mutations, (with recurrent myoglobinuria) to predominantly
especially in the brain — for example, the strokelike encephalopathic forms (with ataxia and cerebellar
episodes in MELAS, the myoclonus in MERRF, and atrophy).32
the pigmentary retinopathy in the Kearns–Sayre syn-
drome. High concentrations of each mutation in mutations in ancillary proteins
cerebral small vessels, in the dentate nucleus of the of the respiratory chain
cerebellum, and in the retinal pigment epithelium, No pathogenic mutations have been identified in
respectively, do not explain why the mutation is in any nDNA-encoded subunits of complex III, IV, or
that particular area of the brain. Conversely, many V, but defects of complexes III33,34 and IV35,36 have
patients with mitochondrial diabetes have symp- been related to mutations in ancillary proteins re-
toms even though they have a relatively small quired for the assembly or insertion of cofactors.
amount of mutation, suggesting that the pathoge- Cytochrome c oxidase deficiency is generalized in
netic mechanism goes beyond a mere energy defi- disorders that are due to mutations in genes re-
cit. For example, diabetes may be the result of sub- quired for the assembly of complex IV, but the en-
tle interactions among oxidative energy levels and zyme defect and the symptoms are more severe in
the glucose sensor,18 the NADH shuttle,19 and even certain tissues; for example, mutations in the sur-
uncoupling proteins.20 Even more puzzling, muta- feit gene (SURF1) predominantly affect the brain and
tions that are ubiquitous often have tissue-specific cause Leigh’s syndrome, mutations in a gene re-
effects (e.g., deafness due to mutations in 12S rRNA, quired for the synthesis of cytochrome oxidase
cardiopathy due to mutations in tRNAIle, and op- (SCO2) or in cytochrome c oxidase 15 (COX15)37 cause in-
tic atrophy due to mutations in ND genes). Studies fantile cardiomyopathy in addition to brain disease,
of animal models with mtDNA mutations (“mito- and mutations in cytochrome c oxidase 10 (COX10) and
mice”)21,22 may provide some answers to these another gene for the synthesis of cytochrome oxi-
riddles. dase (SCO1) affect kidney and liver tissues, respec-
tively. Although pathogenic mutations may occur in
structural subunits of complexes III, IV, and V, they
respiratory-chain disorders
may be lethal in utero because there is no metabolic
due to defects in ndna
compensation, and complex V is the sole site of ox-
In recent years, interest has shifted toward mende- idative phosphorylation38 (Fig. 2B). This concept
lian genetics in mitochondrial disease. This shift would apply only to the “all-or-none” type of men-
is understandable, not only because most of the delian inheritance, since mutations in mtDNA-
75-plus respiratory-chain proteins are encoded by encoded components of complexes III, IV, and V do
nDNA (Fig. 2B), but also because proper assembly indeed occur but are expressed incompletely be-
and function of respiratory chain complexes require cause of heteroplasmy.
approximately 60 additional (ancillary) nucleus-
encoded proteins. Mutations in these genes can also defects in intergenomic signaling
cause mitochondrial disease.23 affecting respiratory function
In the course of evolution, mitochondria lost their
mutations in structural components independence, and mtDNA is now the slave of
of the respiratory chain nDNA, depending on numerous nucleus-encoded
Mutations in structural components of the respira- factors for its integrity and replication.39 Mutations
tory chain have thus far been found only in complex- in these factors affect mtDNA directly, either quanti-
es I24 and II25-27 and have generally been associat- tatively or qualitatively, and cause diseases that are
ed with severe neurologic disorders of childhood, inherited as mendelian traits.
such as Leigh’s syndrome and leukodystrophy.28 A quantitative alteration is exemplified by abnor-
mal reductions in the number of mtDNA molecules may offer new approaches to therapeutic interven-
(both per cell and per organelle) — mtDNA-deple- tion (e.g., lowering blood thymidine concentrations
tion syndromes. A qualitative alteration is exempli- in patients with mitochondrial neurogastrointesti-
fied by multiple deletions (in contrast to the single nal encephalomyopathy).
mtDNA deletions in sporadic Kearns–Sayre syn-
drome, progressive external ophthalmoplegia, and defects of the membrane lipid milieu
Pearson’s syndrome). Except for cytochrome c, which is located in the in-
Ophthalmoplegia is the clinical hallmark of mul- termembrane space, all components of the respira-
tiple mtDNA deletions,40 but patients with autoso- tory chain are embedded in the lipid milieu of the in-
mal dominant progressive external ophthalmople- ner mitochondrial membrane, which is composed
gia often have proximal limb weakness, peripheral predominantly of cardiolipin. Cardiolipin is not
neuropathy, sensorineural hearing loss, cataracts, merely a scaffold but is an integral and indispen-
endocrine dysfunction, and severe depression.41,42 sable part of some respiratory-chain components.53
Autosomal recessive progressive external ophthal- It therefore stands to reason that defects in cardio-
moplegia has two main clinical presentations: one lipin would cause respiratory-chain dysfunction and
consists of cardiomyopathy and ophthalmoplegia,43 mitochondrial disease. This concept is exemplified
and the other of peripheral neuropathy, gastroin- by an X-linked disorder, Barth syndrome (mitochon-
testinal dysmotility, and leukoencephalopathy (mi- drial myopathy, cardiomyopathy, growth retarda-
tochondrial neurogastrointestinal encephalomy- tion, and leukopenia).54 The mutated gene in Barth
opathy).44 syndrome, G4.5, encodes a family of acyl–coenzyme
Both quantitative and qualitative defects may re- A synthetases (tafazzins) that must have an im-
sult from impairment of the integrity of the mito- portant role in cardiolipin synthesis, because car-
chondrial genome. Such impairment can be direct diolipin concentrations are markedly decreased in
(e.g., affecting proteins required for the replication skeletal and cardiac muscle and in platelets from
and maintenance of mtDNA) or indirect (e.g., af- affected patients.55
fecting proteins required to maintain nucleotide
pools in mitochondria). For example, some families
with autosomal dominant progressive external disorders with indirect
involvement of the
ophthalmoplegia have mutations in Twinkle, a mi- respiratory chain
tochondrial protein similar to bacteriophage T7
primase/helicase, whereas other families have mu- Indirect involvement of mitochondria has been
tations in the mitochondrial adenine nucleotide documented or suggested in many conditions, in-
translocator 1 (ANT1).45,46 Mutations in mitochon- cluding normal aging, late-onset neurodegenera-
drial-specific DNA polymerase g have been associ- tive diseases, and cancer. However, the precise role
ated with both dominant and recessive multiple- of mitochondrial dysfunction in these conditions
deletion disorders.47 remains controversial.
Mitochondrial neurogastrointestinal encephalo-
myopathy is clearly due to the loss of function of thy- defects of mitochondrial protein
midine phosphorylase, resulting in markedly in- importation
creased concentrations of thymidine in the blood.48 Cytosolic proteins destined for mitochondria have
Thymidine phosphorylase is not a mitochondrial mitochondrial targeting signals that enable them
protein, yet it appears to have a selective effect on to be routed to the appropriate compartment within
mitochondrial nucleotide pools required for main- the organelle, where they are then refolded into an
taining the integrity and abundance of mtDNA. active configuration.56 Although a number of mu-
The role of nucleotides is bolstered by the pathoge- tations in mitochondrial targeting signals have been
nicity of the ANT1 mutations and by recent findings found, few errors in the importation machinery it-
that mutations in mitochondrial thymidine ki- self are known, perhaps because they may be le-
nase49,50 and deoxyguanosine kinase51,52 are asso- thal.57 However, at least one such defect has been
ciated with the myopathic and hepatocerebral forms identified, the deafness–dystonia syndrome (Mohr–
of mtDNA depletion. Knowledge of these mutations Tranebjaerg syndrome), an X-linked recessive dis-
makes prenatal diagnosis feasible for some families order characterized by progressive neurosensory
with the infantile mtDNA-depletion syndromes and deafness, dystonia, cortical blindness, and psychiat-
ric symptoms,58 features that are strikingly similar mon pathogenic mechanism in aging and in Alz-
to those of the primary mitochondrial diseases. This heimer’s disease, amyotrophic lateral sclerosis,
disorder is due to mutations in TIMM8A, encoding Huntington’s disease, progressive supranuclear pal-
the deafness–dystonia protein (DDP1), a compo- sy, and Parkinson’s disease.66 Rearrangements of
nent of the mitochondrial-protein–import machin- and point mutations in mtDNA may accumulate
ery in the intermembrane space. According to a over time, eventually surpassing the pathogenic
recent report, an autosomal dominant form of he- threshold in multiple tissues (aging) or in specific
reditary spastic paraplegia is associated with mu- areas of the central nervous system (neurodegener-
tations in the mitochondrial import chaperonin ative disorders). Although mtDNA mutations do
HSP60.59 increase in postmitotic tissues of healthy elderly
persons, there is no convincing evidence that they
defects in mitochondrial motility reach deleterious levels.67 The role of mtDNA mu-
Mitochondria are not static organelles; they are pro- tations in neurodegenerative disorders, whether as
pelled within the cell by energy-requiring dynamins the cumulative effect of generic mutations or as the
along cytoskeletal microtubule “rails.”60 Mutations specific effect of putative pathogenic mutations, is
in a gene encoding a mitochondrial dynamin-relat- even more controversial.68
ed guanosine triphosphatase (OPA1) are associat-
ed with an autosomal dominant form of optic at- therapeutic approaches
rophy, which together with Leber’s hereditary optic
neuropathy, is a major cause of blindness in young Therapy for mitochondrial diseases is woefully in-
adults.61,62 adequate. In the absence of a clear understanding of
basic pathogenetic mechanisms, treatments have
neurodegenerative diseases been palliative or have involved the indiscriminate
A few neurodegenerative disorders are due to muta- administration of vitamins, cofactors, and oxygen-
tions in proteins that target the mitochondria. These radical scavengers, with the aim of mitigating, post-
include Friedreich’s ataxia, at least one form of he- poning, or circumventing the postulated damage to
reditary spastic paraplegia, and Wilson’s disease. the respiratory chain.69
Friedreich’s ataxia is due to expansion of trinucleo- Rational therapies, on the whole, remain elusive,
tide (GAA) repeats in the FRDA gene, which encodes but the broad outlines of such approaches are be-
frataxin, a mitochondrion-targeted protein involved ginning to emerge. For the mtDNA-related disor-
in iron homeostasis.63 Excessive free iron resulting ders, the most promising approach is to reduce the
from decreased concentrations of frataxin may ratio of mutated to wild-type genomes (“gene shift-
damage proteins containing iron-sulfur groups, in- ing”).70 Such shifting might be accomplished by
cluding complexes I, II, and III, and aconitase, a pharmacologic,71 physiological,70 or even surgi-
Krebs-cycle enzyme. An autosomal recessive form cal72 approaches. Genetic approaches to treatment
of hereditary spastic paraplegia is due to mutations are particularly daunting, since they will require tar-
in the SPG7 gene, which encodes paraplegin, a mi- geting not only affected cells, but also the organelles
tochondrial protein similar to yeast metalloproteas- within them. Nevertheless, some headway is being
es.64 Impairment of the respiratory chain is suggest- made here as well, although it is limited to in vitro
ed by the presence of ragged-red fibers and fibers systems. These include the selective destruction of
deficient in cytochrome c oxidase in muscle from af- mutant mtDNAs through importation of a restric-
fected patients. In Wilson’s disease, an autosomal tion enzyme into mitochondria,73 the replacement
recessive disease characterized by movement dis- of a mutant mtDNA-encoded protein with a geneti-
order and liver failure, there are mutations of the cally engineered normal equivalent expressed from
ATP7B gene, which encodes a copper-transporting the nucleus (allotopic expression),74-76 the replace-
ATPase, one isoform of which is localized in mito- ment of a defective respiratory-chain complex with
chondria.65 The pathogenesis of Wilson’s disease a cognate complex from another organism,77 and
may involve either direct damage to copper-contain- the importation of a normal tRNA to compensate
ing enzymes, such as cytochrome c oxidase, or more for a mutation in the corresponding organellar
generic oxidative damage to the cell owing to the tRNA.78
accumulation of copper. As for nuclear mutations, the problems of gene
Mitochondrial dysfunction may be a final com- therapy are the same as those encountered in oth-
er mendelian disorders. However, pharmacologic dria.82 Only one other patient with Luft’s syndrome
treatments might be of use in special cases, such as has been identified.83 Yet nowadays, the possibility
lowering thymidine concentrations in patients with of mitochondrial dysfunction needs to be taken into
mitochondrial neurogastrointestinal encephalomy- account by every medical subspecialty. Although
opathy.79 Reports that cytochrome c oxidase defi- caution is required in discriminating primary from
ciency can be reversed by the supplementation of secondary mitochondrial involvement, progress in
copper in cultured cells with a mutation in SCO2, a this field has been striking enough to amply justify
copper chaperone, suggest that copper supplemen- the term “mitochondrial medicine,”84 used by Luft
tation may be useful in some patients.80,81 in the title of a review written 32 years after he first
The concept of mitochondrial disease was intro- described “his” syndrome.
duced 41 years ago, when Luft and coworkers de- Supported in part by grants from the National Institutes of Health
scribed a young woman with severe, nonthyroidal (NS11766, NS28828, NS39854, and HD32062) and the Muscular
Dystrophy Association.
hypermetabolism due to loose coupling of oxida- We are indebted to Drs. Eduardo Bonilla, Michio Hirano, and
tion and phosphorylation in muscle mitochon- Lewis P. Rowland for their collaboration and helpful suggestions.
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