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` small (20-
(20-30 nm) nonenveloped, icosahedral, +ve
ssRNA viruses
` Replicate in the cytoplasm
` resist lipid solvents (e.g. ether) because they do not
have an envelope
` The family includes 2 groups:
1- Enteroviruses
2- Rhinoviruses
Among the major enteroviruses are poliovirus,
coxsackieviruses, echoviruses, and hepatitis A virus .
` Enteroviruses infect primarily the enteric tract,
` whereas rhinoviruses are found in the nose and throat
(rhino = nose).
ántroduction
Picornaviruses are among the most diverse
(more than 200 serotypes) and 'oldest' known
viruses (temple record from Egypt ca. 1400
B.C.).
FMDV (foot and mouth disease virus) was
one of the first viruses to be recognised -
Loeffler and Frosch 1898.
` Poliomyelitis as a viral disease was first
recognised by Landsteiner and Popper, 1909
(though the virus was not isolated until the
1930's.
Name: 'Pico (Greek very small ) RNA Viruses'.
` iriginally based on physical properties (particle
density & pH-
pH-sensitivity) & serological
relatedness,
` more recently based on nucleotide sequence.
There are there are nine genera within the
Picornaviridae.. Five of these infect humans:
Picornaviridae
` Enteroviruses
` Rhinoviruses
` Hepatoviruses
` Parechoviruses
` Kobuviruses
` Parechoviruses were formerly classified
among the Echoviruse
Echovirusess and cause
gastrointestinal and respiratory tract
infections, and occasionally cases of
encephalitis and flaccid paralysis.
` Kobuviruses also cause gastroenteritis.
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Enterovirus infections are common in humans;
seasonal peak in autumn; frequently undiagnosed:
Enteroviruses
Virus family Serotypes
Polio 1-3
Coxsackie A 1 - 22, 24
Coxsackie B 1-6
Echovirus 1 - 9, 11 - 27, 29 - 34
Hepatitis A Enterovirus 72
Other Enteroviruses 68 - 71
enera of Picornaviruses
Enterovirus
Polio Diseases of the human
Coxsackie A and B (and other) alimentary
Echo tract (e.g. polio virus)
Other enteroviruses
Disease of the
Rhinovirus(HRV) nasopharyngeal region
(e.g. common cold virus)
Hepatovirus
Human hepatitis virus A
Parechovirus
Parechovirus Formerly echoviruses
22 and 23.
33
upper
Rhino labile to acid degrees
>100 aerosol respirator
viruses pH C
y tract
(approx)
37
Entero resistant to degrees
Resistant 72 oro-fecal gut
viruses acid pH C
(approx)
!
` The genome consists of one s/s (+)sense RNA
molecule of between 7.2kb (HRV14) to 8.5kb
(FMDV).
` A number of features are conserved in all
Picornaviruses::
Picornaviruses
` Genomic RNA is infectious (~1x106
(~1x106--fold less
infectious than intact particles, although
infectivity is increased if the RNA is introduced
into cells by transfection) - CHARACTERá TáC iF
(+) EN E RNA VáRU E !!!
` There is a long (600-
(600-1200 base) untranslated
region at the 5' end (important in translation
translation,,
virulence and possibly encapsidation
` and a shorter 3' untranslated region (50-
(50-100
bases) - important in (-)strand synthesis.
` The genome RNA has positive polarity;
polarity; i.e., on entering
the cell, it functions as the viral mRNA.
mRNA.
Echo 2 VLA-
VLA-2 (very late ántegrin--like
ántegrin
activation
molecule
antigen)
Echo 6 DAF (Decay
Accelerating
???
Factor)
EMCV 1 VCAM
VCAM--1 (Vascular
Cell Adhesion
???
Molecule)
Uncoating:
` After adherence to the receptor, the virus can be eluted again, but if
this happens, the particle undergos conformational changes due to
the loss of VP4 and infectivity is lost - this is also the first stage in
uncoating:
`
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` An RNA virus needs to make an RNA that can serve as a
messenger RNA for protein synthesis in a host cell.
` án the case of the positive strand RNA viruses (whose
genome, by definition, is the same sense as mRNA), the
genomic RNA can serve as the message (figure 2).
` The virus capsid serves as the delivery vehicle to the
cytoplasm.
` ince the genome is RNA and copied by an RNA
polymerase, there is no need for a typical promoter
(TATA box, CAT box etc) upstream of the protein
encoding genes (as found in DNA viruses or
retroviruses);
` moreover, positive strand viruses do not need to make
new proteins before making mRNA as their RNA can
serve directly as a message.
*
is polyadenylated.
Vp is at the 5' end of the viral genomic sense
(+ve) RNA but is lost before translation
` At the same time as viral protein synthesis is
occurring, host cell protein synthesis is shut off.
` The host cell mRNAs however remain fully
functional when assayed in an experimental
system, so selective degradation of cell mRNAs
is not the reason for protein synthesis inhibition.
inhibition.
` 1- ine way host cell protein synthesis occurs is
via the cleavage of initiation factor eáF
eáF--4, one of
the cap binding proteins of the host cell's
ribosomes so that cellular mRNAs cannot bind to
the ribosomes.
` Association with cap-
cap-binding proteins is a
prerequisite for the translation of most cellular
RNAs.
` Thus, only uncapped messages such as that of
translated.
the picornavirus are translated.
` Note that most viruses express capped RNAs
similar to normal mRNA and so this mechanism
of shutting down host protein synthesis is not
available to them.
` 2- The viral proteins also change the
permeability of the host cell, altering the ionic
composition of the cell and inhibiting cell mRNA
association with ribosomes.
` 3- Moreover, the large number of copies of viral
RNA simply out-
out-compete the cell's mRNAs.
` Picornaviruses also have a protease
activity that can cut one of the proteins of
the initiation complex, eáF4 (figure 3),
and this seriously affects the cellƞs ability
to translates normal capped messages but
does not affect translation from the áRE ;
thus the virus can suppress host cell
translation while leaving the translation of
its own RNA unaffected.
Fig.3 Picornaviruses also have a protease activity
that can cut one of the proteins of the initiation
complex, eáF4
án the picornavirus RNA there is a region of
secondary structure called an internal ribosome
entry site (áRE )
` The fact that there is only one áRE
means that there is only one primary
translation product;
` that is there can only be one large protein
made.. This protein will eventually be cut
made
up to make several proteins in the mature
virus and thus we call this primary product
a polycistronic protein since it is encoded
by more than one gene (cistron).
` The proteases that cut up the original
polyprotein are encoded in the virus
genome and the proteolytic process is
ordered as shown in figure 4.
Fig.4 The proteases that cut up the original
polyprotein are encoded in the virus genome and
the proteolytic process is ordered
` A single RNA can code for more than one
protein in eukaryotes but this is done by splicing
out parts of the original transcript to make
another mRNA that serves as a monocistronic
message.
` plicing enzymes that carry out this process are
found in the nucleus (since this is where mRNAs
are made).
` ince RNA viruses are normally cytoplasmic,
they cannot take advantage of splicing enzymes.
` Thus, RNA viruses that have only one mRNA
ought only to be able to make one large protein
- but they have developed a number of tricks to
overcome this (figure 5) and do, indeed, make
more than one protein.
` ome can take advantage of the
alternative splicing enzymes of the host
cells (and therefore must have a nuclear
stage).
` ithers make a single large protein which
has a protease activity; this cuts up the
large precursor to a series of smaller
proteins.
` ithers, such as the picornaviruses, have
found ways to make a single mRNA
function in a polycistronic fashion even
though they are in a eukaryotic cell.
Fig.5
` The kinetics of Picornavirus replication are
rapid, the cycle being completed in from
5-10 (typically 8) hours.
` enomic RNA is translated directly by
polysomes, but ~30 min after infection,
cellular protein synthesis declines sharply,
almost to zero, this is called r-r -
the primary cause of c.p.e(cytopathogenic
effect):
Time after ánfection: Event:
harp decrease in cellular macromolecular synthesis;
~1--2h
~1 margination of chromatin (loss of homogeneous appearance
of nucleus)
~6--10h
~6 Cell lysis; release of virus particles
, &
Available
ámmunity
To disease
-
Echoviruses RNA Meningitis, etc Many No - -
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-&
no no yes yes no
*
1
*
` #!
- flaccid paralysis is the predominant finding
- Respiratory paralysis can occurs due to brain stem
involvment
antisera.
4
` No antiviral therapy
` ,# !
- Type A and B can cause myocarditis in neonates and
young children
- Fever, chest pains, arrhythmia and even cardiac
failure can result
- Mortality rates are high.
high.
` "#*
` The diagnosis is made either by isolating the
virus in cell culture or suckling mice or by
observing a rise in titer of neutralizing
antibodies.
` A rapid (2.5 hour) PCR
PCR--based test for
enteroviral RNA in the spinal fluid is useful for
making a prompt diagnosis of viral meningitis
because culture techniques typically take days to
obtain a result.
` 4
` There is neither antiviral drug therapy nor a
vaccine available against these viruses. No
passive immunization is recommended.
` ECHi = enteric cytopathic human orphan
` Transmitted by fecal-
fecal-oral route
Type: állness:
68 Pneumonia
69 None (?)
` '# '7"
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` ,##
` '5
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4"
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#8
` #*
` ine serotype.
` áncludes encephalomyocarditis virus (EMCV)
(model infection of mice), mengovirus,
` Maus--Elberfield virus,
Maus
` Columbia virus
` all considered to be strains of EMCV (really a
mouse virus, but can infect man, elephants,
squirrels...).
` enome size ~7.8kb; 5' non-
non-translated region
contains poly-
poly-C tract of ~100-
~100-170nt (like
Apthoviruses).
Encephalomyocarditis virus