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Unit 5
Revision
Teacher 1 –
Control in
Organisms
3.5.1 3.5.5
Survival and Response
Organisms increase their chance of survival by
responding to their environment. Their behaviour
is most likely going to be in search of food or
shelter from predators.
Movement of
auxin
Auxins effect on roots
Auxin has an opposite effect on roots. It is a low
concentration of auxin which causes increased
growth rate in roots. In both root and shoot the
auxin is redistributed (diffused) to the lowers side.
A reflex arc
Structure of a myelinated motor
neurone
The myelin sheath
The myelin sheath consists of other nerve cells
and allows the nerve impulse to travel quicker.
In the CNS, In the PNS,
Oligodendrocytes. Schwann cells.
Resting potential
An electrical potential difference
is maintained between the
outside and inside of the
neurone. The inside of the
axon is 70mV more negative
than the outside. (The
membrane is polarised)
This is maintained by:
o Large anions such as
negatively charged proteins
inside the axon
o Passive diffusion of Na+ and
K+ ions across the membrane
o Active transport of the Na+
and K+ ions by a sodium-
potassium pump found in the
membrane of the neurone.
A Nerve Impulse
1. Nerve impulse reaches the neurone.
2. ‘Voltage-activated’ sodium channels open.
3. There is an influx of Na+ ions – when the threshold value
is met - which causes the inside of the neurone to become
positively charged (compared with the outside).
DEPOLARISATION
4. The action potential continues down the axon.
5. The gated sodium channels close and the potassium
channels open.
6. The efflux of K+ causes REPOLARISATION of the
membrane.
The transmission of an
action potential in a
myelinated neurone is
called SALTATORY
PROPAGATION.
Synapse
A nerve impulse can only travel in one
direction at the synapse because:
o Only the pre-synaptic neurone has
neurotransmitter-containing
vesicles.
o Only the post-synaptic membrane
has receptors for the
neurotransmitter.
o There is a diffusion gradient of
neurotransmitter between the two
neurones (across the synaptic
cleft).
The secretion of neurotransmitters
directly onto the target cell results
in a rapid, short-lived and localised
response.
At an excitatory synapse...
1. The action potential arrives at the pre-synaptic membrane.
2. Calcium channels open and Ca2+ ions enter the neurone.
3. This causes the secretary vesicles to move towards and fuse with
the membrane and the neurotransmitter, acetylcholine is released
into the synaptic cleft.
4. Acetylcholine diffuses across the Cholinergic Synapse and binds to
receptors on the post-synaptic membrane.
5. This causes sodium-ion channels in the post-synaptic neurone to
open leading to the action potential being continued down the
next neurone.
6. The neurotransmitter is then hydrolysed by the enzyme
acetylcholinesterase found in the synaptic cleft and the products
are reabsorbed into the pre-synaptic neurone.
7. Acetylcholine is the resynthesised.
At an inhibitory synapse...
When the inhibitory neurotransmitter binds to
the post-synaptic membrane, K+ and Cl-
channels open and the inside of the neurone
becomes more negative. Therefore, the
membrane is less likely to reach threshold and
an action potential is unlikely.
Summation
Summation is the method of signal transduction between
neurons, which determines whether or not an action
potential will be triggered by the summation (adding
together) of postsynaptic potentials.
No I or H zone when
the muscle is
contracted.
H zone
I band
When an impulse
reaches the
neuromuscular
junction and the
neurotransmitter
binds to the
post-synaptic
receptors, Ca2+
ions are released
around the actin
molecules.
These ions bind to
calcium ion
binding sites
which causes
tropomyosin to
move and
expose the
ATP molecules are hydrolysed to ADP and inorganic
phosphate. The energy released is transferred to the myosin
heads which – with the ADP attached - move and bind to the
exposed binding sites on the actin molecule forming a cross
bridge. The ADP is released
ADP
m
ATP
Relaxed
Pi
1= Bipolar Cell
2= Cone
3= Rod
RODS CONES
Monochromatic Vision Colour Vision
Good Sensitivity Poor Sensitivity
Many rods connected to one Each cone is connected to one
bipolar cell poor acuity = bipolar cell good acuity =
poor resolution good resolution
Is used for peripheral vision as Found mainly on the fovea,
found all over the retina. which means that can only
detect images in centre of
retina.
PRINCIPALS OF
HOMEOSTASIS
Homeostasis in mammals involves physiological control systems that maintain the
internal environment within restricted limits. (e.g. Body temperature at around 37°.)
Negative Feedback:
Negative feedback systems maintain systems at a preset level by detecting deviations from that level
and initiating corrective mechanisms to restore it.
e.g. Body temperature and blood glucose concentration are controlled by negative feedback.
The body has separate mechanisms for controlling these deviations in each directions providing greater
control.
e.g. Different areas of the brain for temperature loss and temperature gain
Positive Feedback:
Positive feedback systems exaggerate a deviation from the preset and is often associated with the break
down of control systems.
e.g. During hyperthermia, the negative feedback system breaks down and a positive feedback loop is
established meaning that the body’s core temperature continues to decrease.
e.g. During childbirth, contractions of the uterus wall releases oxytocin which then increases the
contractions further until the child is born.
...
...are substances that stimulate their target cells via the blood
system. This results in a slow, long-lasting and widespread
response.
...
...are released from cells and only affect cells in the immediate
vicinity. They are usually released by injured or infected cells. Their
secretion causes blood vessels around the area to dilate
(inflammation)
Histamine
-Produced by mast cells in response to injury or allergen.
-Causes capillaries to dilate and their walls to become more permeable which
allows some of the plasma to leave the blood.
-This increased permeability causes swelling and makes it easier for phagocytes to
exit the blood and ingest the dead tissue and bacteria found in the wound.
Prostaglandins
-Produced by mast cells in response to injury or allergen.
-Cause warmth, pain and redness around the injured area.
-As well as causing vasodilation of arterioles, prostaglandins promote blood
clotting which minimises blood loss from the wound and stop entry of
microorganisms.
Homeostasis – Body Temperature Control
Increase in skin/blood temperature
Nerve impulse sent to the heat loss centre
of the hypothalamus via the autonomic
nervous system.
Vasodilation of skin arterioles which
increases radiation of heat.
Increased sweating which increases heat
loss by evaporation.
Decrease in skin/blood temperature
Nerve impulse sent to the heat gain centre
of the hypothalamus via the autonomic
The maintenance of body temperature nervous system.
and blood pH is important as too high or Vasoconstriction of skin arterioles which
low a temperature/pH could denature the decreases radiation of heat.
enzymes of the body or prevent them Stop sweating to avoid the heat loss through
from working efficiently. evaporation.
Piloerector muscles contract, hairs stand up
on body to insulate heat
Ectotherms V Endotherms
• Homeotherms/Endotherms - These are organisms that
that regulate their own body temperature internally using
biological mechanisms. Their internal body temperature is
independent of the external temperature. (Don't use the
term 'warm-blooded').
-Too low plasma glucose conc. results in fatigue, paleness and possibly losing
consciousness (coma).
- A deviation from healthy blood glucose conc. could result in excess water loss
or gain by red blood cells due to the change in water potential.
-Cells around the body could shrink or burst if tissue fluid were to contain too
much or too little glucose.
Maintained by two hormones; insulin and
glucagon which are found in the Islets of
Langerhans in the pancreas. Both hormones
bind to liver cell receptor proteins which
releases enzymes which catalyse the
interconversion of glucose and glycogen.
Insulin
(Glycogenesis)
Glucose Glycogen
(Glycogenolysis)
Glucagon
Increase in glucose conc Decrease in glucose conc
Detected by islet cells Detected by islet cells
α-cells decrease glucagon α-cells increase glucagon
secretion secretion
ᵝ-cells increase insulin ᵝ-cells decrease insulin secretion.
secretion.
...both insulin and glucagon bind to receptor proteins on the surface of liver cells and
through a cascade system activate enzymes which control the interconvertion of
glucose and glycogen: Once they bind to the receptor, a G-protein is activated which
turns ATP into cyclic AMP (the second messenger). This cyclic AMP then activates
enzymes which...
Thyroxin
- Increases metabolic rate leading to an increase in
energy requirements.
Diabetes
What is it?
- Type 1 diabetes is where the ß cells in the islets of Langerhans are damaged
and cannot produce sufficient insulin so blood glucose conc. becomes
erratic.
- Type 2 diabetes is where not enough insulin is produced by the ß cells AND
the receptors on the liver cells become insensitive to it.
- Symptoms for both Type 1 + 2 diabetes include urinating more, fatigue, loss
of weight and excessive thirst.
Covalent bonds
hold the sugar
phosphate
backbone
together.
Anti-parallel
strands
mRNA and tRNA • Both have Uracil (U) base
STRUCTURE instead of Thymine (T).
• Both single stranded instead of
double stranded.
• Both have ribose sugar
backbone rather than
deoxyribose sugar backbone.
Transcription – In the nucleus
DNA helix is unwound by DNA helicase.
RNA polymerase produces a pre-mRNA strand using
complementary base pairing and RNA nucleotides
found in the nucleus. (The pre-mRNA is complementary to the
anti-sense strand of DNA so therefore produces the protein that the sense
strand codes for.)
(DNA helix re-winds.)
Introns and promoter regions are removed from the pre-
mRNA which is then spliced back together to form
mRNA.(and capped with a nucleotide which ribosomes can recognise.)
DNA - AGT.CTT.GAC.ACT
mRNA – UCA.GAA.CUG.UGA
(mRNA is spliced after removal of introns)
Protein
Gene Mutation
Occur spontaneously during DNA replication and
involve the deletion or substitution of bases.
Chance increased by mutagens such as
carcinogenic chemicals and radiation.
Some mutations results in a changes amino acid
sequence (different or inactive protein).
Others do not change the amino acid sequence
because of the degenerate nature of the code.
Stem Cells
Totipotent cells all genes in this unspecialised
cell have the potential to be expressed. A zygote
has totipotency. Able to grow / divide rapidly.
During development a totipotent cell translates
only 3-5% of its DNA and becomes specialised.
PLANTS
Many mature plant cells maintain totipotency and
have the ability to develop in vivo into whole plants
or into plant organs under correct conditions. This is
why taking ‘cuttings’ can result in new plants.
During micropropagation tiny samples of plant tissue
can be grown on an agar plate with the correct
nutrients and hormones to form explants.
Stem Cells - continued
Only a few totipotent cells remain in the adult
human body - stem cells.
These are found in the bone marrow.
These can be used to treat genetic disorders-
the stem cells, when under the correct
conditions can form new tissue if humans
have damaged their own. Bone marrow
transplants are used for the treatment of
leukaemia etc.
Genes which control cell division
Proto-oncogenes control the rate of cell
division.
There are drugs with a similar shape to oestrogen which block the
receptors and stop transcription. This is a treatment for breast
cancer sufferers.
oestrogen
oestrogen
oestrogen
oestrogen
cytoplasm nucleus
siRNA
A short double-
strand of RNA which
interferes with
(represses) the
expression of a
specific gene.
Post-transcriptional
interference.
Creating DNA / DNA fragments
Reverse transcriptase
The DNA is cut at specific palindromic
enzyme
recognition sequences using restriction
enzymes.
37ºC
72ºC
In VIVO and In VITRO cloning of genes
In VIVO In VITRO
The use of restriction enzymes and The use of PCR in cloning DNA
ligases to insert DNA fragments into
a vector (virus or liposome) which fragments. Can be used for
are then transferred into host cells. paternity tests/crime
These transformed host cells can be investigations etc.
grown and therefore clone the
desired DNA fragments. ☺PCR is fully automated
‘Sticky ends’ are left by the restriction which makes it a quick and
endonuclease which allow the relatively cheap method of
exposed bases pairs to anneal to DNA cloning.
other strands with complementary
‘sticky ends’. ☺Billions of copies of a small
☺Delivers the gene, already in the DNA sample can be made.
organism- good for making products
e.g. Insulin.
Genetic Fingerprinting
An organisms genome contains many non-coding repetitive base
sequences which are very unlikely to be repeated in another
individual.
DNA fragments are cloned through PCR and can be analysed to find
genetic relationships such as a paternity test, to diagnose a genetic
disease or to find genetic variation in a population.
Genetic fingerprinting is also used in forensic science to match
hair/blood samples to suspects and in agriculture to produce
genetically superior crops. Animal breeding can also be
supplemented with genetic manipulation to produce animals with
desirable characteristics.
Liposome Vectors
Liposomes are tiny spheres or phospholipids and other chemicals.
Because of their small size they can pass easily through plasma
membranes and carry the desired gene with them.
How do we know which bacteria now
contain the desired gene?
Primer to start
DNA synthesis
The DNA Primer to start
fragments which DNA synthesis
DNA The DNA
want sequencing
polymerase fragments which
DNA
DNA nucleotides DNA nucleotides want sequencing
polymerase
and a small quantity and a small quantity
of ‘A terminator’ of ‘G terminator’
nucleotides nucleotides
The sequence can then be worked out from the position of the fragments on
the agar plate.
Restriction Mapping
Using a restriction enzyme on large DNA sections provides
fragments. The more fragments, the more cuts were made by
the restriction enzymes. The number of cuts equal the number
of recognition sites on that DNA strand.
If these fragments are put through gel electrophoresis then the
relative distance between cut sites is determined.
A restriction map is made of the original DNA.
More Recent Developments...
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