Académique Documents
Professionnel Documents
Culture Documents
Historical Review Alexander the Great and West Nile Virus Encephalitis John S. Marr* and Charles H. Calisher
Patient characteristics Onset of final illness May 29, 323 BC Death June 10, 323 BC Escalating fever associated with chills Excessive thirst, diaphoresis Acute abdominal pain Single episode of back pain at onset of fever Increased weakness leading to prostration with intermittent periods of energy Delirium Aphonia Terminal flaccid paralysis
Microorganisms
Single-celled organisms that are too small to be seen
without a microscope
Bacteria are the smallest living organisms
Viruses are smaller but are not alive
The Prokaryotes
Prokaryotic Characteristics
No membrane-bound nucleus
Single chromosome Cell wall in most species Prokaryotic fission Metabolic diversity
pilus
bacterial flagellum
DNA
ribosomes in cytoplasm
Bacterial Shapes
coccus
bacillus
spirillum
Archaebacteria
Methanogens
Extreme halophiles
Extreme thermophiles
Archaebacteria Habitats
Eubacteria
Includes most familiar bacteria Have fatty acids in plasma membrane
Metabolic Diversity
Photoautotrophs
Chemoautotrophs Chemoheterotrophs
Bacterial Genes
Bacteria have a single chromosome
Prokaryotic Fission
turenotes/finished/ecolivideo.mov
Conjugation
and consists of more than 200 species of bacteria. The mixture of organisms regularly found at any anatomical site is referred to as the normal flora.
vertebrates E. coli does not normally infect us Many benefits: vitamin K and the B complex are produced by E. coli prevent colonization by pathogens stimulate the production of cross-reactive antibodies
hamburger incidents Both made national news when many people became ill and some died.
waters of all kinds may indicate a problem with sewage and or farm runoff.
E. coli Photos
EM cells
http://www.bact.wisc.edu/bact330/nfE.coli_colonies.jpeg
Culture plate
Patricia Guthrie - Staff Friday, December 15, 2000 The last of a dozen lawsuits, filed by families of children sickened in a 1998 E. coli outbreak tied to Cobb County's White Water park, has been settled out of court for an undisclosed sum, attorneys said Thursday. The family of Jordan Faith Shook of Cartersville, whose symptoms were among the most severe of the 26 children sickened by E. coli O157:H7, agreed to an out-of-court settlement. The settlement was sealed in court records and will not be disclosed, said Bill Marler, attorney for James and Judy Shook, Jordan's parents
http://www.marlerclark.com/news/whitewater10.htm
http://www.cellsalive.net/photos/images/strep1.jpg
Unexpected Consequences
One weekend in June of 1998 while Cassie Moore
was camping with her three children, she obtained a minor cut on her finger, which she bandaged properly. She also injured the left side of her body participating in sports. Not thinking much of either, she bandaged the cut, and went to bed (Moore, 1999).
edu:81/ScienceEd/stories/storyReader$89
Warning!
The next two slides are very graphic. They show the
Severe Case
http://www.bact.wisc.edu:81/ScienceEd/stories/storyReader$89
Amputee
number of drinking water systems on domestic and foreign commercial aircraft tested this summer by the government did not meet federal standards because they were contaminated with potentially harmful bacteria, regulators said Monday. (Tuesday, September 21, 2004 Posted: 10:46 AM EDT (1446 GMT) )
E. coli outbreak alarms Germany as young women sicken (BBC 25 May 2011)
Germany is alarmed at the scale of an E. coli food
poisoning outbreak which is thought to have killed three people and may have infected hundreds more.
Salads suspected health conscious women.
E. coli cucumber scare: Spain angry at German claims BBC 31 May 2011
Spain has expressed anger at links being made
Reaction to the cucumber crisis Country Germany Action Consumers told not to eat cucumbers, lettuces and raw tomatoes. 1,150 cases of E.coli confirmed; 14 deaths One death and 36 suspected E. coli infections, linked to travel in northern Germany. Top European cucumber producer - threatens to seek compensation from the European Union for lost vegetables sales Ban on all imports of cucumbers, tomatoes and fresh salad from Spain and Germany pending further notice Some Spanish-grown cucumbers removed from sale Some Spanish-grown cucumbers removed from sale Ban on sale of cucumbers, tomatoes and aubergines imported via Germany Reported to have banned cucumber imports from Spain Halted all cucumber shipments to Germany Testing cucumbers for
Sweden
Spain
Russia
Czech Republic
France
Austria
from Egypt may be the source of highly toxic E. coli outbreaks in Germany and France that have killed at least 48 people, according to initial investigations by European scientists. (June 2011)
Salmonella
FOODBORNE ILLNESS
From CBS
http://www.youtube.com/watch?v=s7_QPeFYTx8&f
eature=fvsr
Characteristics of Salmonella
http://en.wikipedia.org/wiki/Salmonella
Gram Staining
Laboratory staining protocol developed to help identify bacteria Two stains are used on heat-fixed (death by heat) smear of a bacterial
culture
Gram- bacteria appear red or pink under the microscope because they
do not retain the blue dye, but do retain the pink dye Does not work on all types of bacteria
Second Best
http://www.youtube.com/watch?v=OQ6C-
gj_UHM&feature=grec_index
A Gram stain of mixed Staphylococcus aureus (Gram positive cocci) and Escherichia coli (Gram negative bacilli)
http://en.wikipedia.org/wiki/Gram_staining
bacteria which are one-celled organisms too small to be seen without a microscope. Two types, Salmonella enteritidis and Salmonella typhimurium are the most common in the United States and account for half of all human infections. Strains that cause no symptoms in animals can make people sick, and vice versa. If present in food, it does not usually affect the taste, smell, or appearance of the food. The bacteria live in the intestinal tracts of infected animals and humans.
dex.asp
http://www.fsis.usda.gov/factsheets/salmonella_questions_&_answers/in
Salmonellosis
Salmonellosis is an infection with bacteria called Salmonella.
Most persons infected with Salmonella develop diarrhea, fever, and abdominal cramps 12 to 72 hours after infection. The illness usually lasts 4 to 7 days, and most persons recover without treatment. However, in some persons, the diarrhea may be so severe that the patient needs to be hospitalized. In these patients, the Salmonella infection may spread from the intestines to the blood stream, and then to other body sites and can cause death unless the person is treated promptly with antibiotics. The elderly, infants, and those with impaired immune systems are more likely to have a severe illness.
losis/
http://www.cdc.gov/nczved/divisions/dfbmd/diseases/salmonel
Deaths
About 142,000 (reported) Americans are
infected each year with Salmonella enteritidis from chicken eggs, and about 30 die.[18] The shell of the egg may be contaminated with salmonella by feces or environment (common), or its interior (yolk) may be contaminated by penetration of the bacteria through the porous shell or from a hen whose infected ovaries contaminate the egg during egg formation (unlikely). http://en.wikipedia.org/wiki/Salmonella
chicken feed used at two Iowa farms has been linked to a salmonella outbreak that prompted the recall of more than a half billion contaminated eggs, U.S. regulators said on Thursday.
By Alina Selyukh Alina Selyukh Thu Aug 26, 5:24 pm ET
CBS News has learned that some of the recalled eggs are being sent to egg processing facilities, along with fresh ones that infected hens are still producing. The eggs will be cooked, pasteurized and used in products like ice cream and mayonnaise. The FDA says it's legal and safety experts insist there's little risk to consumers. http://ozarksfirst.com/fulltext?nxd_id=316835
Published online 30 August 2011 | Nature | doi:10.1038/news.2011.510 Beneficial gut bacteria, or probiotics, have been shown in the past to
alleviate symptoms of stress and anxiety. found that probiotics have a direct impact on mood neurotransmitters in mice. Mice fed a strain of Lactobacillus rhamnosus were less anxious and produced fewer stress hormones than control animal. These mice were more chilled out.
http://www.nature.com/news/2011/110830/full/news.2011.510.html
Helicobacter pylori
A peptic ulcer is a sore on the lining of the stomach
or duodenum, the beginning of the small intestine. Less commonly, a peptic ulcer may develop just above the stomach in the esophagus, the tube that connects the mouth to the stomach. A bacterium called Helicobacter pylori (H. pylori) is a major cause of peptic ulcers. Nonsteroidal antiinflammatory drugs (NSAIDs), such as aspirin and ibuprofen, are another common cause. Rarely, cancerous or noncancerous tumors in the stomach, duodenum, or pancreas cause ulcers.
Helicobacter pylori
Botox
Botulinum toxin is a protein produced by the bacterium Clostridium
botulinum, and is considered the most powerful neurotoxin ever discovered. four kilograms of the toxin, if evenly distributed, would be more than enough to kill the entire human population of the world. Muscles cant contract. Popularly known by one of its trade names, Botox or Dysport, it is used for various cosmetic and medical procedures.
The researchers believe the bacteria are producing chemicals which are
Dr. Testerman said this new chemical was almost identical to one found in seeds from the cycad plant, which had been shown to trigger a Parkinson's-like disease among people in Guam.
at their cores.
The find lends credence to the "bio-precipitation" idea, which suggests
that bacteria are actively involved in stimulating precipitation. The bacteria have protein coatings that cause water to freeze at relatively warm temperatures.
medicine's most powerful antibiotics working has been determined by researchers. The way bacteria freely exchange genes between themselves, and even between species, means this resistance gene could spread to other disease-causing bacteria.
Carbapenem antibiotics are considered last line of
has entered UK hospitals, experts warn. They say bacteria that make an enzyme called NDM-1 have travelled back with NHS patients who went abroad to countries like India and Pakistan for treatments such as cosmetic surgery.
http://www.bbc.co.uk/news/health-10934814
showing promise as a way of delivering cancer drugs into tumours. Spores of the Clostridium sporogenes bacterium can grow within tumours because there is no oxygen.
Percentage of Civilian, Noninstitutionalized Population with Diagnosed Diabetes, by Age, United States, 19802009 http://www.cdc.gov/diabetes/statistics/pre v/national/figbyage.htm
fm
Genetic engineering processes can make human insulin. Human insulin
DNA is placed into the DNA of a second organism. The host organism becomes an insulin-producing factory. People with diabetes (called diabetics) do not correctly produce or use their insulin protein. The insulin protein helps control how much sugar is in your bloodstream. Millions of diabetics need to take insulin. Insulin from cows and pigs has been used since the early 1900s to treat diabetes. Now human insulin protein can be mass-produced through genetic engineering processes.
Antibiotic Production
Streptomyces: a common group of 500
species of soil bacteria. They produce over two-thirds of the clinically useful antibiotics of natural origin (e.g., neomycin, chloramphenicol).[4] The now uncommonly-used streptomycin takes its name directly from Streptomyces. Streptomycetes are infrequent pathogens. http://en.wikipedia.org/wiki/Streptomyces
Carbapenems are a class of beta-lactam antibiotics with a broad spectrum of
antibacterial activity. They have a structure that renders them highly resistant to most beta-lactamases.[1] Carbapenem antibiotics were originally developed from thienamycin, a naturally derived product of Streptomyces cattleya. http://en.wikipedia.org/wiki/Carbapenem
Virus
Noncellular infectious agent
Consists of protein wrapped around a nucleic
acid core Cannot reproduce itself; can only be reproduced using a host cell
Helical virus
Polyhedral virus
lipid envelope; proteins span the envelope, line its inner surface, spike out above it
material and protein Viral nucleic acids and proteins are assembled New viral particles are released from cell
Lytic Pathway
Lysis
Assembly
Lysogenic Pathway
Latent period extends the cycle Viral DNA becomes part of host chromosome for a time
Translation Proteins
Assembly
viral gastroenteritis
self-limiting, mild, and characterized by nausea,
http://rhino.bocklabs.wisc.edu/virusworld/jysart/norwalk_asv2001.jpg
PORT CANAVERAL, Florida (CNN) -- Sunny skies greeted the Disney cruise ship Magic as it docked here early Saturday, carrying 195 sick passengers and crew members. Norwalk virus. (2002)
http://www.cnn.com/2002/TRAVEL/11/30/disney.sick.cruise/
Tower
The largest virus ever discovered has been found in a water-cooling tower in Bradford, England. It was lurking inside single-celled organisms called amoebae, but its discoverers believe that it may also be capable of infecting humans.
http://www.newscientist.com/news/news.jsp?id=ns99993559
Polio
Small water-food borne RNA virus In about 1% of the infected population, the virus
attacks and kills motor neurons This results in various degrees of paralysis
http://www.rednova.com/news/stories/2/2003/04/29/story004.html
Polios Effects
http://cha.state.md.us/edcp/html/polio.html
http://www.bret.org.uk/nec2.htm
loss of appetite
nausea diarrhea fever
Persons at Risk
Household contacts of infected persons Sex contacts of infected persons Persons, especially children, living in areas with
increased rates of hepatitis A during the baseline period from 1987-1997. Persons traveling to countries where hepatitis A is common Men who have sex with men Injecting and non-injecting drug users
Red> 20
The HA World
TRANSMISSION
HAV is found in the stool (feces) of persons with
hepatitis A. HAV is usually spread from person to person by putting something in the mouth (even though it may look clean) that has been contaminated with the stool of a person with hepatitis A.
Prevention
Hepatitis A vaccine is the best protection. Short-term protection against hepatitis A is
available from immune globulin. It can be given before and within 2 weeks after coming in contact with HAV. Always wash your hands with soap and water after using the bathroom, changing a diaper, and before preparing and eating food.
Vaccination
Travelers to areas with increased rates of hepatitis
A Men who have sex with men Injecting and non-injecting drug users Persons with clotting-factor disorders (e.g. hemophilia) Persons with chronic liver disease Children living in areas with increased rates of hepatitis A during the baseline period from 19871997.
http://www.cdc.gov/ncidod/diseases/hepatitis/a/fact.htm
http://www.apotheke-im-globus-wachau.de/Service/reis http://www.webcolombia.com/health/hepatitis/sintomas.jpg
LOUISVILLE, Ky. (AP) Chi-Chi's, the chain of Mexican restaurants, may have served its last chimichanga. Outback Steakhouse Inc. this week closed on its $42.5 million deal for the rights to 76 restaurants in the Chi-Chi's chain, which was beleaguered by bankruptcy and a hepatitis outbreak.
http://www.washtimes.com/business/20040922-091157-9257r.htm
winter. Winters in New York are four times less humid than in summer. In Minnesota, humidity can drop five-fold. Linking the flu to absolute humidity could help health workers prepare for outbreaks.
selectively target cancer cells throughout the body in what researchers have labeled a medical first.
Scientists modified the vaccinia virus, which is more famous for being used to develop a smallpox vaccine. The virus, named JX-594, is dependent upon a chemical pathway, common in some cancers, in order to replicate. http://www.bbc.co.uk/news/health-14730608
Viroids
Smaller than viruses Strands or circles of RNA No protein-coding genes No protein coat Cause many plant diseases
PSTV
Most known viroids cause diseases in plants. The first viroid was discovered in 1971, by Diener. It's
called the potato spindle tuber virus (PSTV), Contains a single loop of RNA Relies wholly on enzymes all ready in the host cell
http://math.ucr.edu/home/baez/subcellular.html#Viroids
Vegetable MD Online
Cornell University Ag School
http://vegetablemdonline.ppath.cornell.edu/Images/Potatoes/PotatoViruses/PotatoVirusfs1.jpg
Prions
Small proteins
Linked to human diseases Kuru Creutzfeldt-Jakob disease (CJD)
Animal diseases Scrapie in sheep Bovine spongiform encephalopathy (mad cow disease)
officials sent warning letters to more than 500 surgery patients at the school's medical center after a brain surgery patient tested positive for a fatal disease similar to the human version of mad cow disease. Chances of infection are very low, said Dr. William Bornstein, chief quality officer for Emory Healthcare. "By using modern sterilization, this has never been transmitted," he said.
http://abcnews.go.com/wire/Living/ap20041001_1791.html
&feature=related
Have a nucleus and organelles Have proteins associated with DNA Use microtubules in a cytoskeleton,
spindle apparatus, and cilia and flagella May contain chloroplasts May divide by mitosis and meiosis
Major Lineages
Heterotrophs
Autotrophs
Mix or Both
Red algae Euglenoids Brown algae Dinoflagellat e Green algae Golden algae Diatoms
Animal-Like Protistans
Informally known as protozoans
May resemble single-celled heterotrophic
protistans that gave rise to animals Include predators, parasites, and grazers
the sporozoans
Naked Amoebas
Change shape constantly Move by means of pseudopods Most are free-living cells that engulf their prey
Amoeba
Amoeba
Video: Amoeba
http://micro.magnet.fsu.edu/moviegallery/pondscu
m/protozoa/amoeba/
(CNN) -- An unidentified 12-year-old died Friday after being infected with an amoeba while swimming in a Florida lake. The boy had meningeal encephalitis -- a combination of meningitis and encephalitis, which causes the brain to swell, according to Dr. Jaime Carrizosa, an infectious disease specialist from Florida Hospital in Orlando. Carrizosa had treated the boy.
http://www.rense.com/general27/oom.htm
Foraminiferans
Shells of silica
Foraminiferan
A living heliozoan
Ciliated Protozoans
Phylum Ciliphora All heterotrophs Arrays of cilia allow
Hypotrich
gullet
Ciliate Conjugation
Most ciliates have two different nuclei
(conjugation)
Paramecium Conjugation
Video: Ciliates
http://micro.magnet.fsu.edu/moviegallery/pondscu
m/protozoa/bursaria/index.html
Animal-Like Flagellates
Phylum Mastigophora
Move by means of flagella All are heterotrophs
Undulating membrane
mitochondrion
Trichomonas vaginalis
Trichomonas vaginalis is a sexually transmitted
disease (STD), although transmission by other routes (such as soiled towels) has been documented.
asymptomatic.
http://www.biosci.ohio-state.edu/~parasite/trichomonas.html
Dinoflagellates
Red Tide
Sporozoans
Parasitic
Complete part of the life cycle inside specific
different hosts
Many cause serious human disease
Cryptosporidium
Toxoplasma
Cysts may be ingested with raw or undercooked meat Exposure to cysts from cat feces Symptoms are usually mild in people with normal
immune function Infection during pregnancy can kill or damage the embryo
The scientists' best guess is that parasite eggs in cat droppings are being washed by sprinklers and rains into coastal-bound storm drains and creeks.
http://www.oar.noaa.gov/spotlite/archive/spot_otter.html
Malaria
Symptoms have been known for more than
2,000 years
Most prevalent in tropical and subtropical
parts of Africa
Kills a million Africans each year Caused by four species of Plasmodium Transmitted by Anopheles mosquitoes
sporozites
Euglenoids
Phylum Euglenophyta
Free-living flagellated cells that live in
freshwater Majority are photoautotrophs Some are heterotrophs that feed on dissolved organic compounds Sewage pollution indicator organisms
mitochondrion pellicle
Chrysophytes
Phylum Chrysophyta
Mainly free-living photosynthetic cells Four groups:
- Golden algae - Yellow-green algae - Diatoms - Coccolithophores
Mixed Diatoms
Diatom Characteristics
Cell wall is composed of silica Two valves (halves) similar to a Petri dish Golden/green in color
freshwater ecosystems
Green Algae
Nuclear fusion
Meiosis, germination
Conjugating Spirogyra