Académique Documents
Professionnel Documents
Culture Documents
growth of micro-organisms in
foods
Frédéric Carlin
UMR 408 Sécurité et Qualité des Produits d’Origine
Végétale
https://www6.paca.inrae.fr/sqpov
Titre de la présentation p. 1
Date / information / nom de l’auteur
Combien de victimes de toxi‐
infections alimentaires en France ?
500 décès*
(Estimation InVS – SantéPublique France)
2000
8000
*Pour > 100 milliards de portions d’aliments
Incidence
Cas Cas décès
hospitalisés
Bactéries 58000- 11000- 200-700
91000 20000
Virus 500000 1000-1500 32
Titre de la présentation p. 12
Date / information / nom de l’auteur
Different types of factors (1)
Intrinsic factors pH, aw, redox
- Food specific, Nutrients, preservatives
- Direct-contact with
micro-organisms
13
Different types of factors (2)
Implicit factors
- Specific to micro- – Maximal specific growth
organisms rate
- Interactions - Synergism and antagonism
14
D’après Gould 2000
How to determine the effect of a factor?
15
Growth / no growth interface
E. coli
8 Ymax
7
µ
Y
Yo 4 λ : lag
3
0 100 200 300 400 500 600 700
Time
17
Survival curve
10
Log10 UFC/ml ou/g
0
0 2 4 6 8 10 12
TIME
18
Staphylococcus aureus survival curves
HP 450 MPa
19
Target in Micro-organisms for
inactivation
20
Sensitivity to osmotic stress
21
Clark and Ordal AM 1969
Cell damages created by physical and chemical
inactivation treatments (Mackey 2000)
Symptoms of damages Possible cause
Sensitivity to low pHs Membrane damages
Osmotic stress
Sensitivity to bile salts, antibiotics, External Membranes Gram‐, Damages to surface
lytic enzymes proteins for Gram+
Sensitivity to oxidative stress Catalase, SOD inactivation. Increase in H2O2 and O2‐
(ROS). Loss in cellular reductors, cofactors of DNA
repair enzymes
Changes in nutrient requirements Enzymatic degradation.
Damages to membranes leading to changes in
accessibility enzyme – substrate
Increase in mutation rate DNA Damages
Extension of lag Need for synthesis of new membranes, DNA, RNA,
ribosomes, etc…
22
Effect of a physical treatment
‐ A case study. Inactivation by heat
Titre de la présentation p. 23
Date / information / nom de l’auteur
Heat treatment
• Processing foods to make them
edible
• Enzymatic and Microbiological
stability
• Heat = energy
• Energy = f (time, temperature)
• Inactivation of microorganisms
= supplying enough energy to
inactivate “ targets ”
24
Heat-resistance parameter (1)
9
log10 cfu/g or /ml
8
Dt°C = 5 min
7
5
D
4
3
0 5 10 15 20
TIME at a given temperature (min)
25
Heat-resistance parameters (2)
100
z = 15 °C
D (min) 10
1
z
0.1
70 80 90 100
TEMPERATURE (°C)
26
Mathematical models
Primary model
Secondary model
27
Heat-resistance of some non spore-
forming bacteria
Temperature Bacteria D Z (°C)
(°C) (min)
65 Thermophilic 100
Fecal streptococci 5 – 30
L. monocytogenes 0.3 – 1
E. coli 0.1
55 P. fluorescens 1-4
28
Heat-resistance of some spore-
forming micro-organisms
Temperature Bacteria D (min) Z (°C)
(°C)
121.2 M. thermoacetica 20-90
100 B. cereus 5 10
C. perfringens 0.3 – 20
31
Heat resistance / Viruses
EFSA 2015 32
Sterilisation in canning
• F0, Heat-treatment at 121,2°C
• For C. botulinum, D121,2°C = 0,21 min et z
= 10°C
• For foods pH > 4.5-4.6, objective = 12D
sterilization process
• F0 = 12 x 0.21= 2.52 min ± 3 min
33
Time temperature curve for can processing
http://www.nzifst.org.nz/unitoperations/httrapps2.htm
34
Calculation of F values. Summation of intervals
35
Pastereurizing value (1)
• Definition : time à 70°C allowing the
same inactivation as the one obtained in
the applied heat process.
• Reference bacterium = Streptococcus
faecalis
• D70°C = 3 min, z = 10°C
36
Pasteurizing value (2)
• For a treatment at constant temperature and
for time t
• 1 min at 70°C, VP = 1
1 min at 90°C, VP = 100
20 min at 80°C, VP = 200
• For a treatment at a changing temperature,
with T = f(t)
37
Factors modulating heat-
resistance
• Intraspecies variability
• Before treatment. Physiology
- How tested cells are formed
- Stress before stress
- Growth stage
• During treatment. Composition of the heating
matrix
- pH, aw, fat content
• After treatment. Recovery conditions
38
Variability of B. cereus heat‐resistance
1000
100
log D (min)
10
0.1
0.01
75 85 95 105 115 125
TEMPERATURE
39
From 19 papers
Genetics and heat‐resistance
(Farkas, 1997) 43
Fats and B. cereus heat-resistance
Olive oil
128°C 9.4
44
(Ababouch et Busta, 1987)
Fats and C. botulinum heat-resistance
Olive oil
129.2°C 5.3
45
(Ababouch et Busta, 1987)
pH and Bacillus coagulans heat-resistance
47
MacKey et al. LAM 1994
Oxygen and growth recovery after heat-treatment (1)
● 10 % H2
○ 100 % N2
▲ 0,5 % O2
△ 1 % O2
◆ 2 % O2
◊ 10 % O2
■ 20 % O2
□ 40 % O2
Reactive oxygen species and
detoxifying system
Respiration =
- energy production
- with ROS generation
ROS
Anion superoxide O2−,
Hydroxyle radical (·OH).
Hydrogen peroxide H2O2
Singulet oxygène O2•
https://fr.wikipedia.org/wiki/D%C3%A9riv%C3%A9_r%C3%A9actif_de_l'oxyg%C3%A8ne#/media/File: 49
Systeme_detox_ROS.GIF
Oxygen and growth recovery after heat-treatment (2)
Titre de la présentation p. 52
Date / information / nom de l’auteur
Cooking vegetables
Vegetable Temperature Cooking time
100°C 10 min
90°C 40 min
53
Heat-treatment and enzymatic
stability
Temperature D peroxydase Peroxydase
inactivation time
54
Thermal resistance of aerobic spore formers isolated from
food products
56
Non predictible effects (1)
• Heat
- viruses, bacteria, yeast < molds < bacterial
spores
• UV
- Bacteria, spores of bacteria < molds
• Irradiation
- Bacteria < spores << viruses
57
Non predictible effects (2)
B. stearothermophilus 1 339 ∞
B. stearothermophilus 2 46.8 91
B. subtilis 0.85 ∞
B. licheniformis 1.02 ∞
58
Nakayama et al. 1996
Light Vs Heat (bacterial spores)
1.2 A.acidoterrestris
Gb.stearothermophilus
1
B.megaterium
B.cereus KBAB4
0.8
F3 value (J/cm ²)
0.4
B.licheniformis
0.2
0
0 10 20 30 40 50 60 70 80 90 100
t3 value (min)
Titre de la présentation p. 60
Date / information / nom de l’auteur
Factors determining microbial growth
• pH
• Water activity
• Redox potential
• Incubation temperature
• Preservatives
• ….
61
How to determine the effect of a factor?
62
Bacterial growth and
parameters
10
8 Ymax
7
µ
Y
Yo 4 λ : lag
3
0 100 200 300 400 500 600 700
Time
63
pH of some foods
Food pH
Fermented shark 11
Hen egg white 9
Fish 6.5 – 7.5
Milk 7
Meat 5.5 – 6.5
Wheat flour 6–7
Vegetables 4.5 – 7
Fruits 2 – 4.5 64
pH and growth rate (1)
µ
66
Rosso et al., AEM, 1996
pH et pKa
67
pH et pKa
68
Physiological effects
Plasma membrane
pH, neutral
HA A- + H+
ATP
ADP
HA A- + H+ 69
pH growth limits for bacterial
foodborne pathogens
Bacteria min pH, opt pH
L. monocytogenes 4.4, 7
B. cereus 5.0, 6.0-7.0
C. botulinum 4.6, 7.0
Vibrio spp. 4.8, 7.8
Salmonella 3.8, 7-7.5
E. coli, including O157 :H7 4.4, 6-7
S. sonnei 4.9, 7.0 ?
S. aureus 4, 6-7
C. perfingens 5.5-5.8, 7.2
Campylobacter 4.9, 7.0
70
How to determine water activity?
Pure water
Equilibrium vapor pressure = P
Equilibrium vapor pressure = P0
aw = 1 aw < 1
P1 Hygrometry1
aw
P0 Hygrometry0
0 < aw < 1 71
Osmoregulation
High aw of external medium Low aw of external medium
(> cell) (< cell)
H2O H2O
- Inner osmotic pressure increase
- Swelling - Accumulation of K+, glutamate
- Mechanical resistance of cell - Compatible solutes
wall 72
Growth of salt stressed L. monocytogenes in
the presence of glycine - betaine or carnitine
0,85 – 0,80 Milk concentrate with sugar, parm eggiano chesse, fruit
cakes
0,80 – 0,75 Salted fish, jam and m armelade, prunes
75
NaCl and sugar concentrations,
and aw
76
Christian 2000
Fruits
Pectin
Starch
Wheat
Meat, fish
Cellulose
78
Leroi el al. FM 2012
Minimal aw for growth of some
bacteria
Bacillus cereus 0.93
Clostridium botulinum 0.94
Clostridium perfringens 0.97
E scherichia coli 0.95
Listeria monocytogenes 0.92
Salmonella species 0.95
Staphylococcus aureus 0.86
Halobacterium halobium 0.75
79
« Hazelnut yoghurt », UK, 1989 (1)
M. Peck, IFR
N i h
« Hazelnut yoghurt », UK, 1989 (2)
M. Peck, IFR
N i h
Minimal aw for growth of some
yeast and molds
Aspergillus flavus/ parasiticus 0.80
Botrytis cinerea 0.97
Eurotium spp 0.62 – 0.74
Penicillium spp. 0.79 – 0.82
Rhizopus stolonifer 0.89
Xeromyces bisporus 0.61
Saccharomyces cerevisiae 0.90
Zygosaccharomyces rouxii 0.62
82
Oxidation –reduction in foods
• [oxydant] + H+ + ne- ⇋ [Reductant]
• With respect to Oxygen Transfer
- Oxidation is the gain of oxygen
- Reduction is the loss of oxygen
• With respect to Hydrogen Transfer
- Oxidation is the loss of hydrogen.
- Reduction is the gain of hydrogen.
• Oxidizing agents add oxygen to another substance or remove
hydrogen from it.
• Reducing agents remove oxygen from another substance or add
hydrogen to it.
• With respect to Electron Transfer
- Oxidation is loss of electrons (OIL)
- Reduction is gain of Electrons (RIG)
• http://chemwiki.ucdavis.edu/Analytical_Chemistry/Electrochemistry/Definitions_of_Oxidation_and_
Reduction 83
Redox potential
• [oxydant] + H+ + ne ⇋ [Reductant]
• Nernst Equation
Eh = E’O + RT/nF Log[oxydant] [H+]/[Reductant]
- E0 = Reference redox potential
- R = perfect gases constant
- Number of electrons implicated in the reaction
- F = Faraday constant
84
Ascorbate, a reducing agent
http://en.wikipedia.org/wiki/Vitamin_C#mediaviewer/File:Ascorbic_acid_structure.png 85
Some redox couples in foods
Couple redox E0 (mV)
½ O2 /H20 +820
Fe3+/Fe2+ + 720
Cytochrome C (ox/red) +250
- Dihydroascorbic/Ascorbic acid +80
Pyruvate/lactate -190
Glutathione oxid./Glutathion red. - 230
NAD+/NaDH -320
86
Redox potentiel of some foods
Aliment pH Eh (mV)
Raw meat 5,7 - 200
Raw minced meat 5,9 + 225
Wheat (whole grain) 6,0 -320 to –360
Barley (ground grain) 7,0 + 225
Cooked meats 6,5 -20 to –150
Cooked dishes meat chicken 5,5-6,1 -20 to –200
Potato tuber 6,0 -150
Lasagna 4,7 -23
Spinach 6,2 + 74
Pear 4,2 +436
Grape 3,9 + 409
Lemon 2,2 +383
87
Snyder 1996, Adans et Moss 1995)
Factors influencing redox potential Eh
in foods
• Nature of redox couples
• Ratio of oxidant to reductant
• pH
• Poising capacity (redox buffer)
• Availibility of oxygen
• Microbial activity
88
Limited oxygen availibility in foods
• Vacuum‐packaging
• Modified oxygen
• Oxygen absorbers
• Reduction by oxidation of food components
• Reduction by the activity of the microflora
• Still too much oxygen for anaerobes?
• Not enough for facultatively anaerobes?
90
91
Respiratory status of micro-organisms
Aerobic/
Energy Redox Toxicity
Type Anaerobic Examples
yield domain of O2
respiration
+100 –
Strict aerobes +/- +++ - Ps. fluorescens
500 mV
Facultative
anaerobes +/+ +++/+ ? - Enterobacteriaceae
Facultative
(aerotolerant) -/+ -
-/+ ? - Lactic acid bacteria
aerobes ++
Strict -/+ -
-/+ ? + Clostridium sp.
anaerobes ++
92
Redox potential, O2, and growth of
C. botulinum
Eh (mV) P germination
O (%)
2
0 - 400 1
Robinson LAM 1994
Consequences of anaerobiosis
• Decrease in growth rate
• Decrease in ATP production
• Different metabolic pathways
• Use of electron acceptors other than oxygen
Metabolism changes in B. cereus
Rosenfeld et al. CJM 2005
B. weihenstephanensis.
Potato purée
Parameter Initial O2 % in headspace
20.9 10 5 1 Vacuum
Lag (days) 5.7 5.9 5.8 6.5 9.1
µmax (h‐1) 1.5 0.68 0.74 0.78 0.81
Nmax 7.7 6.2 6.11 5.4 4.5
105 B. cereus cfu/g à 7.2 9.8 9.3 10.8 14.4
(days) :
Samapundo et al., FM, 2011
Effect of temperature on growth
µ
Temperature
99
Effect of temperature on Listeria
monocytogenes growth
L m ono: effet T °
1. 4
1. 2
µ (h-1)
1
0. 8
µ(1/h)
0. 6
0. 4
0. 2
0
0 5 10 15 20 25 30 35 40 45 50
F
T e m p érat u re (°C )
Temperature
INR A 100 I NRA 1 01 A TC C1 911 5 S O R 10 0 L m o no (I nra)
µ(h-1 ) b orne_ inf bo rne_s up
100
Cardinal temperatures for
growth
Tmin Topt Tmax
(°C) (°C) (°C)
Thermophiles 40-45 55-75 60-90
Le Marc et al.
Physiological effects
• Low temperature
- Keeping exchanges
- maintaining plasma membrane fluidity
- Conversion of fatty acids (saturated
→unsaturated)
- Decrease of enzymatic activity
• High temperature
- Protein denaturation
- Alteration of plasma membrane
104
Quelle température réelle ?
Derens-Bertheau
IJR 2015
Lois empiriques
• Modèles empiriques (Ratkowsky)
- √µ = b (T – Tmin)
õ
Tmin
106
Facteur Température
max opt . T 0 < T < 1
(T Tmin ) 2 (T Tmax )
T
(Topt Tmin )(Topt T )(T Topt ) (Topt Tmax )(Topt Tmin 2T )
min
µopt
113
C. botulinum and sorbic acid
pH Ac. Sorbique (mg/l) - Log10 P à 30°C après
Total Non dissocié 3j 14 j
7,0 0 0 0 0
2000 11 -0,12 -0,12
5,5 0 0 0,15 0,15
1000 156 3,56 0,28
1800 281 7,65 5,65
4,9 0 0 1,2 1,2
370 157 > 6,1 1,5
670 283 > 8,1 8,1>
114
Lund et al. 1987
Interactions between factors
www.foodprocessing-technology.com 115
Interactions and growth of
C. botulinum group II
pH NaCl (%) C. botulinum, types B, E, F
Time to growth at the indicated temperature:
6.5 + 85°C-18 min 0.6 55 - > 104 76 - > 104 > 104
117
M. Peck, IFR Norwich
Objectives of predictive
microbiology
• “Microbiology” and “prediction”
• “Predictive” and “modelling”
• Prediction of survival and growth
• Food industry
• Food safety and stability
• Factors relevant to the food industry
• However a relevant question for biology
Why predicting? Why models?
• Some evidences
- The more I cook, the more I kill
- Some temperatures are better than others for growth
- Biological limits for growth
- High acidity or high salt do not help….
• And ??????
- How much more rapid growth at 20°C than at 10°C?
- Less salt for healthier foods, fine! But consequences on safety?
What is acceptable?
- Safe shelf-life of foods: how long?
• Quantitative data linked with mathematical equations
- Predicting (mathematical) models
Lois empiriques
• Modèles empiriques (Ratkowsky)
- √µ = b (T – Tmin)
õ
Tmin
120
Facteur Température
max opt . T 0 < T < 1
(T Tmin ) 2 (T Tmax )
T
(Topt Tmin )(Topt T )(T Topt ) (Topt Tmax )(Topt Tmin 2T )
min
µopt
pH
pH pH pH pH
min max
pH pH pH pH pH pH
min max opt
2
aw
aw aw aw 1 min
2
aw
opt
awopt awmin aw awopt awopt 1awopt awmin 2.aw
awmin
0.5
0.45
0.4
0.35
0.3
0.25
0.2
0.15
0.1
0.8 0.82 0.84 0.86 0.88 0.9 0.92 0.94 0.96 0.98 1
123
Factor organic acid
max opt . AH AH
AH 1
CMI
AH
acide
1 10 pH pKa
CMI = 9,5 mM
= 0,71
4 environmental factors