Identification 2009

Feuilles de calcul pour l'identification microbienne
Réalisées par J-Noël JOFFIN à partir du travail de Michel CAVALLA, des observations de Jean CAU.
Formule de validation remarquable par Didier HIROU. NOUVELLE VERSION 18
Mise à jour des bases de données : 8-Dec-07 SEPTEMBRE 2008
MERCI À SYLVIE LINO-TURQUIN POUR SES MISES à JOUR QUI DEVRAIT
MERCI À FrançoisRENAUD POUR LES NOUVELLES BASES ENVOYÉES FONCTIONNER SOUS
Mode d'emploi OPENOFFICE…
Sélectionner, à l'aide de l'onglet, la galerie utilisée.
Remplir à l'aide des + et - tous les caractères testés. Terminer chaque entrée par la touche de validation . PASSER DE L'UN À L'AUTRE PAR TABULATION !
La machine affiche alors en haut de la page :
- le taxon le plus probable
- un indice de typicité évaluant la concordance entre le taxon trouvé et les caractères habituels du taxon Taxon le plus
probable
- une évaluation, en fonction de cet indice, de la validité de l'identification.
Évaluation
de
l'Identificati
on
Indice de
typicité
Vous pouvez examiner les calculs dans la feuille pour voir quels autres taxons sont possibles (avec une probabilité inférieure) en particulier pour les galeries 10 caractères.
Enfin, vous devez faire preuve de discernement en évaluant l'identification réalisée mécaniquement par l'ordinateur,
à l'aide de vos connaissances, du contexte de l'identification…
colonne calculant la
la machine calcule le nombre
probabilité relative de
de cas où dans le tableau
chaque taxon
figurent 0% pour un caractère
+ ou 100% pour un caractère -
du profil, rendant
théoriquement impossible
l'identification.
Valeur de S permettant
Probabilité du taxon le l'évaluation. LA FEUILLE EST
plus typique (exemple) PROTÉGÉE MAIS SANS
MOT DE PASSE AFIN
D'ÉVITER LES ERREURS
DE SAISIE ET
L'EFFACEMENT DES
FORMULES.
Quelques remarques techniques :
La valeur du coefficient S pose problème : voici les données de la littérature (FRENEY, RENAUD, HANSEN, BOLLET) :
vous pouvez évidemment
S nombre de tests
1.00E-05 20 simplifier la feuille en
1.00E-08 32 supprimant des onglets
1.00E-10 50
pour les galeries inutiles
Il a donc fallu introduire une valeur pour API10S et API10E… contestables ! (ou ajustables)
pour vous…
Galeries intégrées :
Attention : l'ajout d'une galerie ne pose guère de problèmes…
bactéries G- coques G+ bacilles G+ Anaérobies st. Champignons
API 20 E V4.1 API 20 Strepto V7.0 API Listeria V1. rapid ID 32 A V3API Candida V2.1
API 20 E + V4.1 Rapid ID 32 Strept V3API Coryne V2.1API 20 A V4.0 API20 C AUX V4.0
API 10 S V3.1 API 20 Staph V4.1 Bacillus… API20E ID 32 C V3.0
API 10 E Id 32 Staph V2.1 API50CHB V4.0
Rapid 20 E V3.1
API 20 NE V7.0
API NH V3.0
API Campylo V2.1
Id32E
MAIS si vous m'adresser le tableau souhaité, je ferais l'intégration ce qui permettra à tous
de profiter d'une base de données élargie.
Je peux aussi intégrer les nouvelles versions éventuelles.
VOUS POUVEZ INTÉGRER AVEC basenew
8
nt
es
résultats Proba typicité Incompa Test sur proba Test sur typicit BUG : pb si dans le classement deux valeurs sont égales
1 xxx 0.005 -9.33 3 mauvaise indentifi mauvaise typicité -
2 ### #N/A #N/A #N/A ### ### ATTENTION UN PROBLÈME DANS LE CALCUL : LIRE LE CLASSEMENT COLONNE AC
P(plus typique)
P(taxon/ profil)
P(taxon/ profil)
classement
taxons
nom
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
2
T
1
profil + - + + - ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ###
xxx 0 0 0 0 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 190 ### 0.5% ### ### 3 xxx

xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 ### 0.5% ### ### 3 xxx
résultats Proba typicité Incompa.Test sur proba Test sur typicit BUG : pb si dans le classement deux valeurs sont égales
1 Escherichia coli 1 0.452 -0.23 0 Bonne Id mauvaise typicité -
2 Edwardsiella tarda 0.202 -0.41 3 mauvaise indentifmauvaise typicité -
3 Salmonella choleraesuis ssp choleraesuis 0.177 -0.37 2 mauvaise indentifmauvaise typicité -
4 Escherichia coli 2 0.144 -0.22 0 mauvaise indentifmauvaise typicité -
5 Edwardsiella hoshinae 0.025 -0.53 2 mauvaise indentifmauvaise typicité -
P(plus typique)
P(taxon/ profil)
P(taxon/ profil)
classement
taxons
API 20 E 4.1
ONPG
OF/O
MOB
OF/F
MAN
ODC
SOR
AMY
ADH
MEL
SAC
McC
URE
RHA
NO2
GLU
ARA
GEL
LDC
TDA
H2S
INO
IND
CIT
OX
VP
N2
T
02/2006
profil - - + + - - - - + - - + - - + + + - - - - + - + ? + + 1.00E-06
Buttiauxella agrestis 100 0 0 85 25 0 0 0 0 0 0 100 100 0 1 99 0 92 99 100 0 100 0 100 100 100 100 74 ### 0.0% ### -2.18 6 Buttiauxella agrestis
Cedecea davisae 99 89 0 99 75 0 0 0 0 89 0 100 100 10 0 0 100 0 100 1 0 99 0 87 100 100 100 68 ### 0.0% ### -2.05 6 Cedecea davisae
Cedecea lapagei 99 99 0 0 75 0 0 0 0 90 0 100 99 0 0 0 0 1 100 1 0 99 0 87 100 100 100 100 ### 0.0% ### -2.90 7 Cedecea lapagei
Citrobacter braakii 50 45 0 99 75 81 1 0 4 0 0 100 100 1 100 100 1 91 99 99 0 100 0 95 100 100 100 44 ### 0.0% ### -1.58 2 Citrobacter braakii
Citrobacter freundii 90 24 0 0 75 75 1 0 1 0 0 100 99 25 99 99 99 82 40 99 0 98 0 95 100 100 100 35 ### 0.0% ### -1.43 2 Citrobacter freundii
Citrobacter koseri/amalonati 99 75 0 100 97 0 1 0 99 0 0 100 100 25 99 99 1 1 98 99 0 100 0 95 100 100 100 39 ### 0.0% ### -1.61 2 Citrobacter koseri/amalonaticus
Citrobacter Koseri/farmeri 99 2 0 100 25 0 1 0 99 0 0 100 100 1 99 99 99 80 99 99 0 100 0 95 100 100 100 8 ### 0.0% ### -1.10 2 Citrobacter Koseri/farmeri
Citrobacter youngae 100 50 0 1 80 80 0 0 1 0 0 100 100 0 95 100 1 0 25 100 0 85 0 95 100 100 100 62 ### 0.0% ### -1.87 4 Citrobacter youngae
Edwardsiella hoshinae 0 0 100 99 50 94 0 0 99 0 0 100 100 0 0 1 100 0 0 1 0 100 0 100 100 100 100 5 ### ### ### -0.53 2 Edwardsiella hoshinae
Edwardsiella tarda 0 0 100 99 1 75 0 0 99 0 0 100 0 0 0 0 0 0 0 0 0 100 0 98 100 100 100 2 ### ### ### -0.41 3 Edwardsiella tarda
Enterobacter aerogenes 99 0 99 98 82 0 1 0 0 85 0 99 99 99 99 99 99 99 99 99 0 100 0 97 100 100 100 58 ### 0.0% ### -1.90 1 Enterobacter aerogenes
Enterobacter amnigenus 1 99 25 0 99 40 0 0 0 0 75 0 100 100 0 1 100 99 99 99 99 0 100 0 92 100 100 100 71 ### 0.0% ### -2.08 3 Enterobacter amnigenus 1
Enterobacter amnigenus 2 99 80 0 99 80 0 0 0 0 75 0 100 100 0 99 100 1 99 99 99 0 100 0 100 100 100 100 79 ### 0.0% ### -2.28 3 Enterobacter amnigenus 2
Enterobacter asburiae 100 25 0 99 80 0 0 0 0 10 0 100 99 25 100 0 99 0 100 100 0 100 0 95 100 100 100 51 ### 0.0% ### -1.77 6 Enterobacter asburiae
Enterobacter cancerogenus 100 75 0 99 99 0 0 0 0 89 0 100 100 0 1 100 1 1 100 100 0 100 0 99 100 100 100 92 ### 0.0% ### -2.56 6 Enterobacter cancerogenus
Enterobacter cloacae 98 82 1 92 90 0 1 0 0 85 0 99 99 12 90 85 96 90 99 99 0 100 0 95 100 100 100 56 ### 0.0% ### -1.83 1 Enterobacter cloacae
Enterobacter gergoviae 99 0 32 100 75 0 99 0 0 90 0 100 99 23 1 100 99 100 99 100 0 100 0 90 100 100 100 85 ### 0.0% ### -2.29 3 Enterobacter gergoviae
Enterobacter intermedius 99 0 0 99 1 0 0 0 0 2 0 100 97 0 88 99 40 100 99 99 0 100 0 92 100 100 100 41 ### 0.0% ### -1.61 3 Enterobacter intermedius
Enterobacter sakazakii 100 96 0 91 94 0 1 0 25 91 10 100 100 75 8 99 99 99 99 99 0 100 0 96 100 100 100 80 ### 0.0% ### -2.26 3 Enterobacter sakazakii
Escherichia coli 1 90 1 74 70 0 1 3 0 89 0 0 99 98 1 91 82 36 75 3 99 0 100 0 95 100 100 100 1 ### ### ### -0.23 0 Escherichia coli 1
Escherichia coli 2 26 1 45 20 0 1 1 0 50 0 0 99 90 1 42 30 3 3 1 70 0 98 0 5 100 100 100 4 ### ### ### -0.22 0 Escherichia coli 2
Escherichia fergusoni 96 1 99 100 1 0 0 0 99 0 0 100 99 1 0 87 0 1 99 99 0 100 0 93 100 100 100 15 ### 0.0% ### -1.23 2 Escherichia fergusoni
Escherichia hermanii 100 0 1 100 1 0 0 0 99 0 0 100 100 0 0 99 25 0 99 99 0 100 0 99 100 100 100 26 ### 0.0% ### -1.41 3 Escherichia hermanii
Escherichia vulneris 100 30 50 0 0 0 0 0 0 0 0 100 100 0 1 95 7 95 95 99 0 100 0 100 100 100 100 65 ### 0.0% ### -1.95 4 Escherichia vulneris
Ewingella americana 98 0 0 0 75 0 0 0 0 95 1 99 99 0 0 1 0 1 50 1 0 100 0 60 100 100 100 82 ### 0.0% ### -2.24 5 Ewingella americana
Hafnia alvei 1 75 0 99 98 50 0 10 0 0 50 0 99 99 0 1 99 0 0 25 99 0 100 0 85 100 100 100 13 ### 0.0% ### -1.08 2 Hafnia alvei 1
Hafnia alvei 2 50 0 99 99 1 0 1 0 0 10 0 99 98 0 1 1 1 0 0 1 0 100 0 0 100 100 100 22 ### 0.0% ### -1.28 2 Hafnia alvei 2
Klebsiella oxytoca 99 0 80 0 89 0 78 0 99 80 0 100 100 99 100 99 99 100 100 100 0 100 0 0 100 100 100 87 ### 0.0% ### -2.34 6 Klebsiella oxytoca
Klebsiella pneumoniae ssp 94 18 25 1 18 0 1 0 0 1 0 99 96 57 66 58 20 80 97 85 0 92 0 0 100 100 100 38 ### 0.0% ### -1.44 2 Klebsiella pneumoniae ssp ozaenae
Klebsiella pneumoniae ssp 99 0 73 0 86 0 75 0 0 90 0 100 99 99 99 99 99 99 99 99 0 100 0 0 100 100 100 99 ### 0.0% ### -2.70 3 Klebsiella pneumoniae ssp pneumoniae
Klebsiella pneumoniae ssp r 1 0 0 0 0 0 0 0 0 0 0 99 100 90 90 75 75 1 99 10 0 100 0 0 100 100 100 34 ### 0.0% ### -1.49 5 Klebsiella pneumoniae ssp rhinoscleromatis
Kluyvera spp 95 0 25 99 60 0 0 0 80 0 0 100 99 0 25 93 89 99 99 99 0 95 0 94 100 100 100 11 ### 0.0% ### -1.07 0 Kluyvera spp
Leclercia adecarboxylata 99 0 0 0 0 0 1 0 99 0 1 100 99 0 2 100 66 99 99 100 0 100 0 100 100 100 100 60 ### 0.0% ### -1.95 3 Leclercia adecarboxylata
Moellerella wisconsensis 97 0 0 0 40 0 0 0 15 1 0 100 1 0 0 0 100 99 0 0 0 90 0 0 100 100 100 46 ### 0.0% ### -1.71 5 Moellerella wisconsensis
Morganella morganii 1 0 10 98 1 1 99 93 99 0 0 99 0 0 0 0 1 0 0 0 0 88 0 95 100 100 100 7 ### 0.0% ### -1.01 2 Morganella morganii
Pantoea spp 1 85 1 0 0 13 0 1 0 1 9 1 100 99 1 26 1 98 26 59 61 0 85 0 85 100 100 100 24 ### 0.0% ### -1.26 2 Pantoea spp 1
Proteus mirabilis 1 0 0 99 50 75 99 98 1 1 82 98 0 0 0 0 1 0 0 0 0 93 0 95 100 100 100 54 ### 0.0% ### -1.80 3 Proteus mirabilis
Proteus penneri 1 0 0 0 1 20 100 99 0 0 50 99 0 0 0 0 100 0 1 0 0 99 0 85 100 100 100 45 ### 0.0% ### -1.67 6 Proteus penneri
Proteus vulgaris group 1 0 0 0 12 83 99 99 92 0 74 99 1 1 0 1 89 0 66 1 0 100 0 94 100 100 100 40 ### 0.0% ### -1.57 3 Proteus vulgaris group
Providencia alcalifaciens/rust 0 0 0 0 80 0 0 100 99 0 0 99 1 1 0 0 1 0 0 1 0 100 0 96 100 100 100 27 ### 0.0% ### -1.43 5 Providencia alcalifaciens/rustigianii
Providencia rettgeri 1 1 0 0 74 0 99 99 90 0 0 98 82 78 1 50 25 0 40 1 0 98 0 94 100 100 100 31 ### 0.0% ### -1.35 2 Providencia rettgeri
Providencia stuartii 1 0 0 0 85 0 30 98 95 0 0 98 3 80 0 0 15 0 0 0 0 100 0 85 100 100 100 23 ### 0.0% ### -1.30 4 Providencia stuartii
Rahnella aquatilis 100 0 0 0 50 0 0 1 0 99 0 100 100 0 98 99 100 97 100 98 0 100 0 6 100 100 100 89 ### 0.0% ### -2.40 6 Rahnella aquatilis
Raoultella ornithinolytica 100 0 99 99 99 0 85 0 100 65 0 100 100 99 100 100 100 100 100 100 0 100 0 0 100 100 100 73 ### 0.0% ### -2.17 6 Raoultella ornithinolytica
Raoultella terrigena 100 0 99 6 52 0 0 0 0 75 0 99 99 99 99 99 100 100 100 99 0 100 0 0 100 100 100 83 ### 0.0% ### -2.28 5 Raoultella terrigena
Salmonella choleraesuis ssp 98 75 97 98 75 99 0 0 1 0 0 100 99 0 99 99 1 78 0 99 0 100 0 99 100 100 100 37 ### 0.0% ### -1.53 0 Salmonella choleraesuis ssp arizonae
Salmonella choleraesuis ssp 0 15 99 99 6 64 0 0 0 0 0 100 99 0 98 99 0 20 0 0 0 100 0 95 100 100 100 3 ### ### ### -0.37 2 Salmonella choleraesuis ssp choleraesuis
Salmonella Gallinarum 0 1 100 1 0 25 0 0 0 0 0 100 100 0 0 1 0 0 0 100 0 100 0 0 100 100 100 63 ### 0.0% ### -2.00 6 Salmonella Gallinarum
Salmonella Paratyphi A 0 5 0 99 0 1 0 0 0 0 0 100 99 0 99 98 0 96 0 99 0 100 0 95 100 100 100 12 ### 0.0% ### -1.23 3 Salmonella Paratyphi A
Salmonella Pullorum 0 1 75 100 0 85 0 0 0 0 0 100 100 0 0 100 0 0 0 75 0 100 0 0 100 100 100 16 ### 0.0% ### -1.21 5 Salmonella Pullorum
Salmonella spp 1 56 82 93 65 83 0 0 1 0 1 99 100 40 99 86 1 90 1 99 1 100 0 95 100 100 100 10 ### 0.0% ### -1.00 1 Salmonella spp
Salmonella typhi 0 1 99 0 0 8 0 0 0 0 0 100 99 0 99 0 0 99 0 0 0 100 0 97 100 100 100 21 ### 0.0% ### -1.33 4 Salmonella typhi
Serratia ficaria 99 0 0 0 100 0 0 0 0 40 90 100 100 50 99 74 99 99 100 99 0 92 0 100 100 100 100 94 ### 0.0% ### -2.49 6 Serratia ficaria
Serratia fonticola 99 0 73 99 75 0 0 0 0 0 0 100 100 97 100 99 30 99 99 99 0 99 0 91 100 100 100 49 ### 0.0% ### -1.72 2 Serratia fonticola
Serratia liquefaciens 95 1 78 98 80 0 2 0 0 59 65 100 99 80 98 2 99 72 97 97 0 100 0 95 100 100 100 28 ### 0.0% ### -1.34 1 Serratia liquefaciens
Serratia marcescens 94 0 95 95 96 0 25 0 1 70 87 100 99 85 98 1 99 68 97 25 0 95 0 97 100 100 100 30 ### 0.0% ### -1.39 0 Serratia marcescens
Serratia odorifera 1 95 0 95 99 95 0 0 0 99 50 99 100 99 99 99 99 99 99 99 99 0 99 0 100 100 100 100 50 ### 0.0% ### -1.76 0 Serratia odorifera 1
Serratia odorifera 2 95 0 96 1 95 0 0 0 99 50 99 100 99 99 99 99 1 99 99 95 0 99 0 100 100 100 100 84 ### 0.0% ### -2.30 0 Serratia odorifera 2
Serratia plymuthyca 99 0 0 0 65 0 0 0 0 65 50 100 90 70 70 1 99 85 98 98 0 99 0 50 100 100 100 76 ### 0.0% ### -2.00 3 Serratia plymuthyca
Serratia rubidaea 99 0 30 0 92 0 1 0 0 71 82 99 99 75 1 3 99 95 99 99 0 100 0 85 100 100 100 98 ### 0.0% ### -2.62 2 Serratia rubidaea
Shigella sonnei 96 0 0 93 0 0 0 0 0 0 0 99 99 0 1 75 1 1 0 99 0 100 0 0 100 100 100 57 ### 0.0% ### -1.89 3 Shigella sonnei
Shigella spp 1 0 0 1 0 0 0 0 29 0 0 99 63 0 7 7 1 20 0 50 0 100 0 0 100 100 100 18 ### 0.0% ### -1.14 2 Shigella spp
Yersinia enterocolitica 80 0 0 90 0 0 98 0 50 5 0 99 99 25 98 1 99 4 75 75 0 98 0 2 100 100 100 19 ### 0.0% ### -1.15 1 Yersinia enterocolitica
Yersinia frederiksenii/interm 99 0 0 75 1 0 99 0 99 1 0 100 99 25 99 99 99 1 99 99 0 98 0 5 100 100 100 36 ### 0.0% ### -1.54 1 Yersinia frederiksenii/intermedia
Yersinia kristensenii 80 0 0 80 0 0 99 0 97 0 0 100 99 10 99 0 0 0 99 99 0 98 0 5 100 100 100 64 ### 0.0% ### -1.98 3 Yersinia kristensenii
Yersinia pestis 68 0 0 0 0 0 0 0 0 1 0 99 99 0 70 0 0 0 30 30 0 47 0 0 99 100 100 53 ### 0.0% ### -1.73 6 Yersinia pestis
Yersinia pseudotuberculosis 98 0 0 0 1 0 99 0 0 0 0 99 97 0 0 75 0 50 25 50 0 95 0 0 100 100 100 81 ### 0.0% ### -2.20 6 Yersinia pseudotuberculosis
Aeromonas hydrophila gr.1 98 90 25 1 25 0 0 0 85 25 90 99 99 1 3 5 97 1 75 75 100 97 0 95 99 99 99 47 ### 0.0% ### -1.63 1 Aeromonas hydrophila gr.1
Aeromonas hydrophila gr.2 99 97 80 1 80 0 0 0 85 80 97 97 99 9 9 1 80 1 75 5 100 97 0 95 99 99 99 66 ### 0.0% ### -1.95 1 Aeromonas hydrophila gr.2
Aeromonas salmonicida ssp 1 60 1 0 0 0 0 0 1 0 75 50 54 0 0 0 0 0 1 0 100 98 0 1 99 99 99 78 ### 0.0% ### -2.12 5 Aeromonas salmonicida ssp salmonicida
Photobacterium damselae 1 99 75 0 1 0 98 0 0 10 1 50 0 0 0 0 1 0 0 0 100 100 0 25 99 99 99 69 ### 0.0% ### -2.03 5 Photobacterium damselae
Plesiomonas shigelloides 95 99 100 100 0 0 0 0 100 0 0 99 0 99 0 0 0 0 0 0 100 99 0 95 99 99 99 33 ### 0.0% ### -1.54 4 Plesiomonas shigelloides
Vibrio alginolyticus 0 0 98 75 60 0 1 0 100 10 75 99 100 0 1 0 100 0 10 1 100 47 0 100 99 94 94 6 ### 0.0% ### -0.78 3 Vibrio alginolyticus
Vibrio cholerae 98 1 94 97 75 0 0 0 99 58 92 98 98 0 0 0 94 0 5 0 100 96 0 100 99 99 99 17 ### 0.0% ### -1.18 3 Vibrio cholerae
Vibrio fluviatis 95 99 0 0 1 0 0 0 80 0 75 75 80 0 1 0 75 0 36 75 100 100 0 100 99 99 99 59 ### 0.0% ### -1.80 4 Vibrio fluviatis
Grimontia hollisae 1 0 0 0 0 0 0 0 94 0 0 10 0 0 0 0 0 0 0 0 100 100 0 0 99 99 99 52 ### 0.0% ### -1.82 7 Grimontia hollisae
Vibrio mimicus 99 0 99 99 50 0 0 0 99 1 99 99 99 0 0 0 0 0 0 0 100 95 0 100 99 99 99 43 ### 0.0% ### -1.66 4 Vibrio mimicus
Vibrio parahaemolyticus 0 0 100 99 50 0 1 0 100 1 75 100 99 0 0 1 1 0 12 50 100 63 0 100 98 99 99 14 ### 0.0% ### -1.08 2 Vibrio parahaemolyticus
Vibrio vulnificus 99 0 91 90 25 0 0 0 99 1 99 99 75 0 0 0 1 0 90 0 99 54 0 100 99 99 99 42 ### 0.0% ### -1.57 2 Vibrio vulnificus
Pasteurella aerogenes 99 0 0 80 0 0 99 0 0 0 0 99 0 97 0 1 99 0 0 75 75 100 0 0 100 100 100 70 ### 0.0% ### -2.08 4 Pasteurella aerogenes
Pasteurella multocida 1 4 0 0 25 0 0 0 0 99 0 0 29 1 0 1 0 75 0 0 0 99 90 0 0 2 23 23 25 ### 0.0% ### -1.32 3 Pasteurella multocida 1
Pasteurella multocida 2 7 0 0 45 0 0 0 0 99 0 0 44 99 0 99 0 99 0 0 0 89 90 0 0 2 23 23 9 ### 0.0% ### -1.02 3 Pasteurella multocida 2
Pasteurella pneumotropica/ 60 0 1 10 0 0 25 0 15 7 3 35 12 12 12 1 35 1 2 1 80 99 0 0 9 33 33 20 ### 0.0% ### -1.08 1 Pasteurella pneumotropica/Mannheimia haemolytica
Acinetobacter baumannii/cal 0 0 0 0 51 0 1 0 0 5 5 99 0 0 0 0 0 99 1 99 0 3 0 0 90 98 0 101 ### 0.0% ### -2.91 8 Acinetobacter baumannii/calcoaceticus
Bordetella/Alcaligenes/Morax 0 0 0 0 52 0 14 1 0 25 1 0 0 0 0 0 0 0 0 0 95 62 1 75 75 0 0 96 ### 0.0% ### -2.53 9 Bordetella/Alcaligenes/Moraxella spp (Brucella spp possible)
Burkholderia cepacia 50 0 25 16 78 0 0 0 0 1 43 60 1 0 0 0 13 0 7 20 90 40 0 99 88 97 0 32 ### 0.0% ### -1.27 4 Burkholderia cepacia
Chromobacterium violaceum 0 99 0 0 75 0 0 0 14 0 99 99 0 0 0 0 10 0 0 0 99 75 0 99 99 99 99 67 ### 0.0% ### -2.03 4 Chromobacterium violaceum
Pseudomonas luteola 86 75 0 0 94 0 0 0 0 25 13 84 0 1 0 1 1 15 1 85 0 30 0 100 91 94 0 86 ### 0.0% ### -2.26 5 Pseudomonas luteola
Chryseobacterium indoligen 5 0 0 0 12 0 90 0 75 0 80 0 0 0 0 0 0 0 0 0 99 20 0 0 57 90 10 93 ### 0.0% ### -2.48 7 Chryseobacterium indoligenes
Chryseobacterium meningos 77 0 0 0 20 0 1 0 85 0 90 0 0 0 0 0 0 0 0 0 99 6 0 0 48 93 6 97 ### 0.0% ### -2.60 7 Chryseobacterium meningosepticum
Eikenella corrodens 0 0 75 99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 95 0 1 1 49 49 48 ### 0.0% ### -1.67 6 Eikenella corrodens
Pseudomonas horyzihabitan 0 0 0 0 89 0 0 0 0 25 1 10 0 1 0 1 0 10 0 45 0 7 0 100 99 99 0 77 ### 0.0% ### -2.16 6 Pseudomonas horyzihabitans
Myroides/Chryseobacterium 0 0 0 0 50 0 75 0 0 1 75 0 0 0 0 0 0 0 0 0 99 0 0 0 84 2 2 190 ### 0.0% ### -3.38 9 Myroides/Chryseobacterium indologenes
Ochrobactrum anthropi 15 0 0 0 30 0 25 1 0 15 0 1 0 0 0 0 0 0 0 10 90 42 60 99 99 47 0 88 ### 0.0% ### -2.22 7 Ochrobactrum anthropi
Pseudomonas aeruginosa 0 89 0 0 92 0 25 0 0 1 75 50 0 0 0 0 1 10 1 25 97 12 56 97 100 98 0 95 ### 0.0% ### -2.49 6 Pseudomonas aeruginosa
Pseudomonas fluorescens/pu 0 75 0 0 75 0 0 0 0 10 27 25 0 0 0 0 0 25 1 20 99 26 0 100 96 93 0 90 ### 0.0% ### -2.31 7 Pseudomonas fluorescens/putida
Non-fermenter spp 1 1 0 0 37 0 1 0 0 15 9 9 0 0 0 1 1 1 1 1 93 48 35 99 85 49 0 75 ### 0.0% ### -2.02 5 Non-fermenter spp
Shewanella putrefaciens gro 0 0 0 80 75 75 1 0 0 0 75 1 0 0 0 0 1 0 0 2 99 96 0 100 96 9 0 91 ### 0.0% ### -2.40 5 Shewanella putrefaciens group
Stenotrophomonas maltophil 70 0 75 1 75 1 0 0 0 0 90 1 0 0 0 0 0 0 0 0 1 26 1 100 91 49 0 72 ### 0.0% ### -2.04 5 Stenotrophomonas maltophilia
1 Klebsiella oxytoca 0.899 0.67 0 Excellente Id TB typicité -
2 Serratia odorifera 2 0.046 0.45 1 mauvaise indentifBonne typicité -
3 Vibrio alginolyticus 0.030 0.43 0 mauvaise indentifBonne typicité -
4 Klebsiella ornithinolytica 0.011 0.33 1 mauvaise indentifBonne typicité -
5 Klebsiella pneumoniae ssp pneumoniae 0.009 0.33 1 mauvaise indentifBonne typicité -
P(plus typique)
P(taxon/ profil)
P(taxon/ profil)
classement
taxons
ONPG
ODC
ADH
URE
LDC
TDA
H2S
API 10 E
IND
CIT
VP
T
profil - - + - + - + - + + ###
Buttiauxella agrestis 100 0 3 85 66 0 0 0 0 0 171 ### 0.0% ### ### 4 Buttiauxella agrestis
Cedecea davisae 99 89 0 99 75 0 0 0 0 89 182 ### 0.0% ### ### 3 Cedecea davisae
Cedecea lapagei 99 99 0 0 75 0 0 0 0 90 166 ### 0.0% ### ### 3 Cedecea lapagei
Citrobacter braakii 50 45 0 99 75 81 1 0 4 0 178 ### 0.0% ### ### 2 Citrobacter braakii
Citrobacter freundii 90 24 0 0 75 75 1 0 1 0 0 65 ### 0.0% ### ### 4 Citrobacter freundii 90
Citrobacter koseri/amalona 99 75 0 100 97 0 1 0 99 0 174 ### 0.0% ### ### 3 Citrobacter koseri/amalonaticus
Citrobacter Koseri/farmeri 99 2 0 100 25 0 1 0 99 0 173 ### 0.0% ### ### 3 Citrobacter Koseri/farmeri
Citrobacter youngae 100 50 0 1 80 80 0 0 1 0 181 ### 0.0% ### ### 4 Citrobacter youngae
Edwardsiella hoshinae 0 0 100 99 50 94 0 0 99 0 35 ### 0.0% ### ### 2 Edwardsiella hoshinae
Edwardsiella tarda 0 0 100 99 1 75 0 0 99 0 59 ### 0.0% ### ### 2 Edwardsiella tarda
Enterobacter aerogenes 99 0 99 98 82 0 1 0 0 85 43 ### 0.0% ### ### 1 Enterobacter aerogenes
Enterobacter amnigenus 1 99 25 0 99 40 0 0 0 0 75 175 ### 0.0% ### ### 3 Enterobacter amnigenus 1
Enterobacter amnigenus 2 99 80 0 99 80 0 0 0 0 75 179 ### 0.0% ### ### 3 Enterobacter amnigenus 2
Enterobacter asburiae 100 25 0 99 80 0 0 0 0 10 183 ### 0.0% ### ### 4 Enterobacter asburiae
Enterobacter cancerogenu 100 75 0 99 99 0 0 0 0 89 176 ### 0.0% ### ### 4 Enterobacter cancerogenus
Enterobacter cloacae 98 82 1 92 90 0 1 0 0 85 71 ### 0.0% ### ### 1 Enterobacter cloacae
Enterobacter gergoviae 99 0 32 100 75 0 99 0 0 90 22 ### 0.0% ### ### 2 Enterobacter gergoviae
Enterobacter intermedius 99 0 0 99 1 0 0 0 0 2 190 ### 0.0% ### ### 3 Enterobacter intermedius
Enterobacter sakazakii 100 96 0 91 94 0 1 0 25 91 67 ### 0.0% ### ### 2 Enterobacter sakazakii
Escherichia coli 1 90 1 74 70 0 1 3 0 89 0 30 ### 0.0% ### ### 2 Escherichia coli 1
Escherichia coli 2 26 1 45 20 0 1 1 0 50 0 25 ### 0.0% ### ### 2 Escherichia coli 2
Escherichia fergusoni 96 1 99 100 1 0 0 0 99 0 69 ### 0.0% ### ### 3 Escherichia fergusoni
Escherichia hermanii 100 0 1 100 1 0 0 0 99 0 186 ### 0.0% ### ### 4 Escherichia hermanii
Escherichia vulneris 100 30 50 0 0 0 0 0 0 0 169 ### 0.0% ### ### 5 Escherichia vulneris
Ewingella americana 98 0 0 0 75 0 0 0 0 95 42 ### 0.0% ### ### 3 Ewingella americana
Hafnia alvei 1 75 0 99 98 50 0 10 0 0 50 12 ### 0.0% ### ### 1 Hafnia alvei 1
Hafnia alvei 2 50 0 99 99 1 0 1 0 0 10 68 ### 0.0% ### ### 1 Hafnia alvei 2
Klebsiella ornithinolytica 100 0 99 99 99 0 85 0 100 65 4 ### ### ### ### 1 Klebsiella ornithinolytica
Klebsiella oxytoca 99 0 80 0 89 0 78 0 99 80 1 ### ### ### ### 0 Klebsiella oxytoca
Klebsiella pneumoniae ss 94 18 25 1 18 0 1 0 0 1 61 ### 0.0% ### ### 1 Klebsiella pneumoniae ssp ozaenae
Klebsiella pneumoniae ss 99 0 73 0 86 0 75 0 0 90 5 ### 0.9% ### ### 1 Klebsiella pneumoniae ssp pneumoniae
Klebsiella pneumoniae ssp 1 0 0 0 0 0 0 0 0 0 162 ### 0.0% ### ### 5 Klebsiella pneumoniae ssp rhinoscleromatis
Klebsiella terrigena 100 0 99 6 52 0 0 0 0 75 18 ### 0.0% ### ### 3 Klebsiella terrigena
Kluyvera spp 95 0 25 99 60 0 0 0 80 0 51 ### 0.0% ### ### 2 Kluyvera spp
Leclercia adecarboxylata 99 0 0 0 0 0 1 0 99 0 162 ### 0.0% ### ### 3 Leclercia adecarboxylata
Moellerella wisconsensis 97 0 0 0 40 0 0 0 15 1 62 ### 0.0% ### ### 2 Moellerella wisconsensis
Morganella morganii 1 0 10 98 1 1 99 93 99 0 44 ### 0.0% ### ### 1 Morganella morganii
Pantoea spp 1 85 1 0 0 13 0 1 0 1 9 64 ### 0.0% ### ### 1 Pantoea spp 1
Proteus mirabilis 1 0 0 99 50 75 99 98 1 1 172 ### 0.0% ### ### 1 Proteus mirabilis
Proteus penneri 1 0 0 0 1 20 100 99 0 0 164 ### 0.0% ### ### 3 Proteus penneri
Proteus vulgaris 1 0 0 0 12 83 99 99 92 0 41 ### 0.0% ### ### 2 Proteus vulgaris
Providencia alcalifaciens/r 0 0 0 0 80 0 0 100 99 0 48 ### 0.0% ### ### 4 Providencia alcalifaciens/rustigianii
Providencia rettgeri 1 1 0 0 74 0 99 99 90 0 14 ### 0.0% ### ### 2 Providencia rettgeri
Providencia stuartii 1 0 0 0 85 0 30 98 95 0 16 ### 0.0% ### ### 2 Providencia stuartii
Rahnella aquatilis 100 0 0 0 50 0 0 1 0 99 53 ### 0.0% ### ### 4 Rahnella aquatilis
Salmonella arizonae 98 75 97 98 75 99 0 0 1 0 188 ### 0.0% ### ### 2 Salmonella arizonae
Salmonella choleraesuis 0 15 99 99 6 64 0 0 0 0 73 ### 0.0% ### ### 3 Salmonella choleraesuis
Salmonella gallinarum 0 1 100 1 0 25 0 0 0 0 49 ### 0.0% ### ### 4 Salmonella gallinarum
Salmonella paratyphi A 0 5 0 99 0 1 0 0 0 0 187 ### 0.0% ### ### 5 Salmonella paratyphi A
Salmonella pullorum 0 1 75 100 0 85 0 0 0 0 180 ### 0.0% ### ### 5 Salmonella pullorum
Salmonella typhi 0 1 99 0 0 8 0 0 0 0 46 ### 0.0% ### ### 4 Salmonella typhi
Salmonella spp 1 56 82 93 65 83 0 0 1 0 58 ### 0.0% ### ### 2 Salmonella spp
Serratia ficaria 99 0 0 0 100 0 0 0 0 40 56 ### 0.0% ### ### 3 Serratia ficaria
Serratia fonticola 99 0 73 99 75 0 0 0 0 0 167 ### 0.0% ### ### 3 Serratia fonticola
Serratia liquefaciens 95 1 78 98 80 0 2 0 0 59 28 ### 0.0% ### ### 1 Serratia liquefaciens
Serratia marcesens 94 0 95 95 96 0 25 0 1 70 7 ### 0.1% ### ### 0 Serratia marcesens
Serratia odorifera 1 95 0 95 99 95 0 0 0 99 50 9 ### 0.0% ### ### 1 Serratia odorifera 1
Serratia odorifera 2 95 0 96 1 95 0 0 0 99 50 2 ### ### ### ### 1 Serratia odorifera 2
Serratia plymuthyca 99 0 0 0 65 0 0 0 0 65 55 ### 0.0% ### ### 3 Serratia plymuthyca
Serratia rubidaea 99 0 30 0 92 0 1 0 0 71 23 ### 0.0% ### ### 1 Serratia rubidaea
Shigella spp 1 0 0 1 0 0 0 0 29 0 57 ### 0.0% ### ### 4 Shigella spp
Shigella sonnei 96 0 0 93 0 0 0 0 0 0 189 ### 0.0% ### ### 5 Shigella sonnei
Yersinia enterocolitica 80 0 0 90 0 0 98 0 50 5 32 ### 0.0% ### ### 2 Yersinia enterocolitica
Yersinia frederiksenii/int 99 0 0 75 1 0 99 0 99 1 60 ### 0.0% ### ### 1 Yersinia frederiksenii/intermedia
Yersinia kristensenii 80 0 0 80 0 0 99 0 97 0 34 ### 0.0% ### ### 3 Yersinia kristensenii
Yersinia pestis 68 0 0 0 0 0 0 0 0 1 170 ### 0.0% ### ### 4 Yersinia pestis
Yersinia pseudotuberculos 98 0 0 0 1 0 99 0 0 0 72 ### 0.0% ### ### 3 Yersinia pseudotuberculosis
Aeromonas hydrophila gr. 98 90 25 1 25 0 0 0 85 25 20 ### 0.0% ### ### 1 Aeromonas hydrophila gr.1
Aeromonas hydrophila gr. 99 97 80 1 80 0 0 0 85 80 11 ### 0.0% ### ### 1 Aeromonas hydrophila gr.2
Aeromonas salmonicida ss 1 60 1 0 0 0 0 0 1 0 168 ### 0.0% ### ### 3 Aeromonas salmonicida ssp salmonicida
Photobacterium damsela 1 99 75 0 1 0 98 0 0 10 29 ### 0.0% ### ### 1 Photobacterium damsela
Plesiomonas shigelloides 95 99 100 100 0 0 0 0 100 0 184 ### 0.0% ### ### 4 Plesiomonas shigelloides
Vibrio alginolyticus 0 0 98 75 60 0 1 0 100 10 3 ### ### ### ### 0 Vibrio alginolyticus
Vibrio cholerae 98 1 94 97 75 0 0 0 99 58 8 ### 0.0% ### ### 1 Vibrio cholerae
Vibrio fluviatis 95 99 0 0 1 0 0 0 80 0 185 ### 0.0% ### ### 3 Vibrio fluviatis
Vibrio hollisae 1 0 0 0 0 0 0 0 94 0 45 ### 0.0% ### ### 4 Vibrio hollisae
Vibrio mimicus 99 0 99 99 50 0 0 0 99 1 53 ### 0.0% ### ### 1 Vibrio mimicus
Vibrio parahaemolyticus 0 0 100 99 50 0 1 0 100 1 15 ### 0.0% ### ### 0 Vibrio parahaemolyticus
Vibrio vulnificus 99 0 91 90 25 0 0 0 99 1 40 ### 0.0% ### ### 1 Vibrio vulnificus
Pasteurella aerogenes 99 0 0 80 0 0 99 0 0 0 177 ### 0.0% ### ### 4 Pasteurella aerogenes
Pasteurella multocida 1 4 0 0 25 0 0 0 0 99 0 50 ### 0.0% ### ### 4 Pasteurella multocida 1
Pasteurella multocida 2 7 0 0 45 0 0 0 0 99 0 52 ### 0.0% ### ### 4 Pasteurella multocida 2
Pasteurella pneumotropica 60 0 1 10 0 0 25 0 15 7 26 ### 0.0% ### ### 1 Pasteurella pneumotropica/haemolytica
Acinetobacter baumannii/c 0 0 0 0 51 0 1 0 0 5 36 ### 0.0% ### ### 2 Acinetobacter baumannii/calcoaceticus
Bordetella/Alcaligenes/Mo 0 0 0 0 52 0 14 1 0 25 10 ### 0.0% ### ### 2 Bordetella/Alcaligenes/Moraxella spp (Brucella spp possible)
Burkholderia cepacia 50 0 25 16 78 0 0 0 0 1 27 ### 0.0% ### ### 2 Burkholderia cepacia
Chromobacterium violac 0 99 0 0 75 0 0 0 14 0 66 ### 0.0% ### ### 3 Chromobacterium violaceum
Chryseomonas luteola 86 75 0 0 94 0 0 0 0 25 47 ### 0.0% ### ### 3 Chryseomonas luteola
Chryseobacterium indolig 5 0 0 0 12 0 90 0 75 0 6 ### 0.2% ### ### 2 Chryseobacterium indoligenes
Chryseobacterium mening 77 0 0 0 20 0 1 0 85 0 33 ### 0.0% ### ### 2 Chryseobacterium meningosepticum
Eikenella corrodens 0 0 75 99 0 0 0 0 0 0 165 ### 0.0% ### ### 4 Eikenella corrodens
Flavimonas horyzihabitan 0 0 0 0 89 0 0 0 0 25 21 ### 0.0% ### ### 3 Flavimonas horyzihabitans
Myroides/Chryseobacteriu 0 0 0 0 50 0 75 0 0 1 17 ### 0.0% ### ### 2 Myroides/Chryseobacterium indoligenes
Ochrobactrum anthropi 15 0 0 0 30 0 25 1 0 15 13 ### 0.0% ### ### 2 Ochrobactrum anthropi
Pseudomonas aeruginosa 0 89 0 0 92 0 25 0 0 1 37 ### 0.0% ### ### 2 Pseudomonas aeruginosa
Pseudomonas fluorescens/ 0 75 0 0 99 0 0 0 0 10 38 ### 0.0% ### ### 3 Pseudomonas fluorescens/putida
Non-fermenter spp 1 1 0 0 37 0 1 0 0 15 31 ### 0.0% ### ### 2 Non-fermenter spp
Shewanella putrefaciens 0 0 0 80 75 75 1 0 0 0 70 ### 0.0% ### ### 3 Shewanella putrefaciens
Stenotrophomonas maltoph 70 0 75 1 75 1 0 0 0 0 24 ### 0.0% ### ### 3 Stenotrophomonas maltophilia
1 Escherichia coli 1 0.757 1.00 0 Excellente Id Excellente typicit -
2 Serratia odorifera 0.176 0.84 0 mauvaise indentifExcellente typicit -
3 Citrobacter farmeri 0.036 0.67 1 mauvaise indentifTB typicité -

4 Hafnia alvei 0.009 0.67 1 mauvaise indentifTB typicité -
5 Enterobacter aerogenes 0.005 0.55 1 mauvaise indentifTB typicité -
P(plus typique)
P(taxon/ profil)
P(taxon/ profil)
classement
taxons
ONPG
API 10 S (ver
ODC
GLU
URE
ARA
NO2
LDC
TDA
H2S
IND
CIT
OX
T
profil + + + + + - - - - + - + ###
Citrobacter koseri/amalona 97 100 95 0 86 87 0 2 0 92 0 99 7 ### 0.3% ### ### 1 Citrobacter koseri/amalonaticus

Citrobacter braakii 51 100 99 0 99 75 81 1 0 1 0 99 26 ### 0.0% ### ### 1 Citrobacter braakii
Citrobacter farmeri 98 100 99 0 100 0 0 0 0 100 0 99 3 ### ### ### ### 1 Citrobacter farmeri
Citrobacter freundii 90 100 94 0 0 75 65 1 0 1 0 98 32 ### 0.0% ### ### 2 Citrobacter freundii
Edwarsiella tarda 0 99 1 99 100 1 94 0 0 99 0 99 22 ### 0.0% ### ### 1 Edwarsiella tarda
Escherichia coli 1 76 95 80 98 56 1 3 4 0 70 0 99 1 ### ### ### ### 0 Escherichia coli 1
Escherichia coli 2 74 99 90 0 32 1 0 2 0 50 0 98 6 ### 0.4% ### ### 1 Escherichia coli 2
Escherichia vulneris 100 99 99 15 0 0 0 4 0 0 0 99 19 ### 0.0% ### ### 2 Escherichia vulneris
Enterobacter aerogenes 99 99 99 98 99 84 0 2 0 0 0 99 5 ### 0.5% ### ### 1 Enterobacter aerogenes
Enterobacter amnigenus 99 98 98 0 95 56 0 0 0 0 0 99 13 ### 0.0% ### ### 2 Enterobacter amnigenus
Enterobacter spp/Escherich 100 100 100 0 100 0 0 0 0 0 0 99 11 ### 0.0% ### ### 2 Enterobacter spp/Escherichia coli/Shigella sonnei
Enterobacter cloacae 99 99 99 1 93 94 0 1 0 0 0 99 23 ### 0.0% ### ### 1 Enterobacter cloacae
Hafnia alvei 60 99 75 100 98 40 0 5 0 0 0 99 4 ### 0.9% ### ### 1 Hafnia alvei
Klebsiella oxytoca 99 99 96 78 2 90 0 40 0 100 0 99 9 ### 0.3% ### ### 0 Klebsiella oxytoca
Klebsiella pneumoniae ss 99 99 99 72 0 90 0 60 0 0 1 99 24 ### 0.0% ### ### 2 Klebsiella pneumoniae ssp pneumoniae
Morganella morganii 2 97 1 5 96 2 1 99 91 97 0 88 35 ### 0.0% ### ### 0 Morganella morganii
Pantoea spp 1 100 100 80 0 0 28 0 0 1 0 0 85 30 ### 0.0% ### ### 3 Pantoea spp 1
Pantoea spp 2 96 100 99 0 0 68 0 0 0 100 0 85 18 ### 0.0% ### ### 2 Pantoea spp 2
Proteus mirabilis 1 96 1 1 98 57 83 99 98 2 0 93 43 ### 0.0% ### ### 0 Proteus mirabilis
Proteus penneri 0 100 0 0 0 1 15 100 100 0 0 99 49 ### 0.0% ### ### 7 Proteus penneri
Proteus vulgaris group 0 97 1 0 1 31 83 98 99 94 0 99 45 ### 0.0% ### ### 2 Proteus vulgaris group
Providencia rettgeri 1 99 1 0 0 70 0 94 99 88 0 98 42 ### 0.0% ### ### 2 Providencia rettgeri
Providencia stuartii/alcali 1 99 2 0 0 91 0 15 100 98 0 99 39 ### 0.0% ### ### 3 Providencia stuartii/alcalifaciens
Salmonella choleraesuis s 97 100 99 96 97 50 96 0 0 1 0 99 10 ### 0.1% ### ### 0 Salmonella choleraesuis ssp arizonae
Salmonella choleraesuis ss 0 99 0 97 97 4 70 0 0 0 1 99 31 ### 0.0% ### ### 3 Salmonella choleraesuis ssp choleraesuis
Salmonella Gallinarum 0 100 100 100 1 0 33 0 0 0 0 99 29 ### 0.0% ### ### 2 Salmonella Gallinarum
Salmonella Paratyphi A 0 100 99 0 100 0 5 0 0 0 0 99 28 ### 0.0% ### ### 3 Salmonella Paratyphi A
Salmonella Pullorum 0 100 68 75 99 0 85 0 0 0 0 99 21 ### 0.0% ### ### 2 Salmonella Pullorum
Salmonella spp. 4 100 94 92 95 74 85 0 0 3 0 99 14 ### 0.0% ### ### 0 Salmonella spp.
Salmonella typhi 0 99 0 98 0 0 8 0 0 0 0 99 33 ### 0.0% ### ### 4 Salmonella typhi
Serratia liquefaciens 94 100 98 70 99 85 0 5 0 0 0 99 8 ### 0.3% ### ### 1 Serratia liquefaciens
Serratia marcescens 94 100 19 98 95 97 0 28 0 1 0 95 15 ### 0.0% ### ### 0 Serratia marcescens
Serratia odorifera 95 99 95 97 43 87 1 0 0 99 0 99 2 ### ### ### ### 0 Serratia odorifera
Shigella spp 26 99 40 0 0 0 0 0 0 20 0 99 27 ### 0.0% ### ### 2 Shigella spp
Yersinia enterocolitica 1 41 100 98 0 74 0 0 98 0 49 0 98 17 ### 0.0% ### ### 1 Yersinia enterocolitica 1
Yersinia enterocolitica 2 85 97 0 0 58 0 0 99 0 0 0 98 36 ### 0.0% ### ### 3 Yersinia enterocolitica 2
Yersinia pseudotuberculos 77 98 29 0 0 13 0 96 0 0 0 95 34 ### 0.0% ### ### 3 Yersinia pseudotuberculosis
Aeromonas hydrophila 96 98 61 50 0 50 0 0 0 85 99 98 20 ### 0.0% ### ### 1 Aeromonas hydrophila
Plesiomonas shigelloides 95 99 0 100 100 0 0 1 0 99 99 99 12 ### 0.0% ### ### 1 Plesiomonas shigelloides
Vibrio alginolyticus/para 0 99 19 98 75 61 0 5 0 99 100 47 25 ### 0.0% ### ### 2 Vibrio alginolyticus/parahaemolyticus
Vibrio vulnificus/cholerae 97 98 1 82 92 56 0 1 0 99 100 96 16 ### 0.0% ### ### 1 Vibrio vulnificus/cholerae
Acinetobacter baumanii 0 86 75 0 0 54 0 0 0 0 0 3 38 ### 0.0% ### ### 4 Acinetobacter baumanii
Chryseobacterium indolog 20 0 0 0 0 14 0 92 0 70 99 20 46 ### 0.0% ### ### 4 Chryseobacterium indologenes
Chryseobacterium mening 70 0 0 0 0 20 0 0 0 81 100 6 40 ### 0.0% ### ### 5 Chryseobacterium meningosepticum
Pseudomonas aeruginosa/f 0 30 11 0 0 68 1 15 0 0 99 14 47 ### 0.0% ### ### 4 Pseudomonas aeruginosa/fluorescens/putida
Pseudomonas spp 1 7 8 0 0 54 1 4 0 0 98 48 44 ### 0.0% ### ### 3 Pseudomonas spp
Shewanella putrefaciens g 0 6 1 0 80 83 90 1 0 0 100 96 48 ### 0.0% ### ### 4 Shewanella putrefaciens group
Sphingobacterium multiv 96 46 17 0 0 30 0 92 0 0 96 1 41 ### 0.0% ### ### 3 Sphingobacterium multivorum
Stenotrophomonas maltoph 60 1 0 48 0 76 1 0 0 0 4 26 37 ### 0.0% ### ### 3 Stenotrophomonas maltophila
1 Enterobacter gergoviae 0.695 -0.01 1 TB Id mauvaise typicité -
2 Kluyvera spp 0.117 0.03 1 mauvaise indentifmauvaise typicité -
3 Yersinia enterocolitica 0.079 -0.03 0 mauvaise indentifmauvaise typicité -
4 Pantoea ssp 2 0.049 -0.10 2 mauvaise indentifmauvaise typicité -
5 Escherichia coli 1 0.023 -0.15 1 mauvaise indentifmauvaise typicité -
P(plus typique)
P(taxon/ profil)
P(taxon/ profil)
classement
taxons
RapID 2OE V3.
ONPG
ODC
ADO
MNT
ESC
SAC
GLU
URE
RHA
ARA
MEL
LDC
PPA
RAF
TRE
CEL
XYL
IND
CIT
OX
VP
T
2006/09
profil + - + + - - - + + + - + - - + + + + + + - ###
Buttiauxella agrestis 100 0 54 0 66 0 89 99 97 89 0 89 100 89 0 97 75 100 0 0 0 23 ### 0.0% ### ### 5 Buttiauxella agrestis
Cedecea spp 69 0 34 0 83 0 73 38 1 26 0 0 76 0 65 96 0 99 0 34 0 35 ### 0.0% ### ### 4 Cedecea spp
Citrobacter amalonaticus/ 89 0 92 1 60 0 1 70 97 91 0 99 99 5 4 99 1 100 99 0 0 14 ### 0.0% ### ### 1 Citrobacter amalonaticus/farmeri
Citrobacter freundii group 86 0 30 0 50 0 10 4 92 94 1 88 24 62 60 97 46 100 1 0 0 11 ### 0.2% ### ### 2 Citrobacter freundii group
Citrobacter koseri 96 0 99 0 99 0 75 53 96 94 99 99 94 0 38 99 0 100 99 0 0 21 ### 0.0% ### ### 3 Citrobacter koseri
Edwarsiella hoshinae 0 100 100 0 3 0 33 0 3 0 0 0 0 0 99 100 0 100 85 0 0 48 ### 0.0% ### ### 8 Edwarsiella hoshinae
Edwarsiella tarda 0 100 100 0 1 0 0 0 0 0 0 0 0 0 0 0 0 100 99 0 0 62 ### 0.0% ### ### 11 Edwarsiella tarda
Enterobacter aerogenes 100 99 99 1 95 0 90 99 99 99 99 98 99 85 99 99 98 100 0 94 0 28 ### 0.0% ### ### 1 Enterobacter aerogenes
Enterobacter asburiae 100 0 92 0 13 0 0 96 100 100 0 0 98 0 100 100 66 100 0 13 0 7 ### 0.8% ### ### 3 Enterobacter asburiae
Enterobacter cancerogenu 100 1 55 0 97 0 99 70 100 98 0 98 55 1 5 100 1 100 0 96 0 19 ### 0.0% ### ### 2 Enterobacter cancerogenus
Enterobacter cloacae 99 2 87 1 95 0 71 51 99 84 25 81 98 79 88 99 81 100 1 81 0 8 ### 0.5% ### ### 0 Enterobacter cloacae
Enterobacter gergoviae 90 85 100 80 68 0 99 99 99 75 2 97 1 90 99 85 75 100 0 75 0 1 ### ### ### ### 1 Enterobacter gergoviae
Escherichia coli 1 96 82 57 3 0 0 1 2 79 66 7 70 2 59 30 76
23 100 91 0 0 5 ### ### ### ### 1 Escherichia coli 1
Escherichia coli 2 10 41 22 2 2 0 1 1 70 70 8 33 1 14 5 88
8 100 96 0 0 15 ### 0.0% ### ### 1 Escherichia coli 2
Escherichia fergusonii 87 95 96 0 0 0 0 0 52 87 57 61 87 0 0 74 0 100 100 0 0 31 ### 0.0% ### ### 5 Escherichia fergusonii
Escherichia hermanii 75 0 100 0 25 0 0 14 100 87 0 87 99 0 1 99 0 100 100 0 0 17 ### 0.0% ### ### 3 Escherichia hermanii
Escherichia vulneris 100 74 33 0 8 0 74 11 91 82 16 16 83 83 0 99 83 100 0 0 0 30 ### 0.0% ### ### 4 Escherichia vulneris
Ewingella americana 90 0 0 0 95 0 0 40 0 1 0 1 10 0 0 100 0 100 0 80 0 49 ### 0.0% ### ### 6 Ewingella americana
Grimontia hollisae 9 0 0 4 0 0 0 0 65 0 0 0 4 0 0 4 0 96 100 0 100 58 ### 0.0% ### ### 8 Grimontia hollisae
Hafnia alvei 25 98 93 1 5 0 35 24 46 26 0 19 1 1 5 95 1 100 0 15 0 24 ### 0.0% ### ### 1 Hafnia alvei
Klebsiella oxytoca 100 98 1 58 73 0 46 99 99 95 93 97 100 99 100 98 100 100 100 94 0 13 ### 0.1% ### ### 1 Klebsiella oxytoca
Klebsiella pneumoniae ss 95 23 1 1 65 0 3 88 67 62 95 35 55 75 10 88 66 99 0 1 0 25 ### 0.0% ### ### 1 Klebsiella pneumoniae ssp ozaenae
Klebsiella pneumoniae ss 96 84 1 65 97 0 70 99 94 98 90 90 100 94 99 100 100 100 0 95 0 18 ### 0.0% ### ### 2 Klebsiella pneumoniae ssp pneumoniae
Klebsiella pneumoniae ssp 0 0 0 0 1 0 96 50 90 90 90 90 50 50 50 92 89 99 0 0 0 33 ### 0.0% ### ### 5 Klebsiella pneumoniae ssp rhinoscleromatis
Kluyvera spp 80 70 90 0 50 0 83 85 90 50 0 50 85 80 60 100 95 98 81 4 0 2 ### ### ### ### 1 Kluyvera spp
Leclercia adecarboxylata 100 0 0 0 27 0 99 100 100 100 79 99 100 100 55 98 58 98 98 0 0 32 ### 0.0% ### ### 5 Leclercia adecarboxylata
Moellerella wisconsensis 75 0 0 0 100 0 0 0 0 0 100 0 0 100 100 0 100 100 0 0 0 63 ### 0.0% ### ### 12 Moellerella wisconsensis
Morganella morganii 1 5 95 98 1 83 1 0 1 1 0 0 0 0 0 27 0 97 98 1 0 46 ### 0.0% ### ### 4 Morganella morganii
Pantoea ssp 1 99 0 0 3 40 0 96 85 96 87 12 44 99 96 1 96 13 71 100 1 0 34 ### 0.0% ### ### 1 Pantoea ssp 1
Pantoea ssp 2 99 0 0 0 80 0 76 66 99 92 4 83 90 42 98 99 47 28 100 47 0 4 ### ### ### ### 2 Pantoea ssp 2
Pantoea ssp 3 70 0 0 0 35 0 8 28 71 15 0 16 3 0 84 96 4 4 99 50 0 12 ### 0.1% ### ### 2 Pantoea ssp 3
Proteus mirabilis 0 2 96 98 44 99 1 6 1 24 0 1 1 0 1 85 1 1 98 15 0 43 ### 0.0% ### ### 1 Proteus mirabilis
Proteus penneri 1 0 0 100 0 100 0 0 0 4 0 0 0 0 75 2 1 0 83 0 0 60 ### 0.0% ### ### 7 Proteus penneri
Proteus vulgaris group 1 0 0 98 8 99 0 64 1 5 0 1 0 0 89 1 1 90 97 1 0 47 ### 0.0% ### ### 1 Proteus vulgaris group
Providencia alcalifaciens 1 0 1 0 83 97 0 0 1 1 75 0 1 0 3 2 1 99 100 0 0 64 ### 0.0% ### ### 4 Providencia alcalifaciens
Providencia rettgeri 2 0 0 99 73 99 0 60 1 1 87 29 0 1 26 1 1 98 99 0 0 52 ### 0.0% ### ### 2 Providencia rettgeri
Providencia stuartii 2 0 0 34 67 96 0 5 1 1 1 0 1 0 13 96 1 83 98 0 0 51 ### 0.0% ### ### 3 Providencia stuartii
Raoultella ornithginolytic 100 88 100 45 100 0 100 100 100 100 88 99 91 100 100 100 100 100 100 55 0 10 ### 0.2% ### ### 3 Raoultella ornithginolytica
Salmonella choleraesuis s 92 99 92 0 85 0 93 0 82 99 0 98 0 23 0 84 0 0 100 0 0 41 ### 0.0% ### ### 6 Salmonella choleraesuis ssp arizonae
Salmonella choleraesuis s 0 99 92 0 7 0 0 0 8 39 0 69 0 5 0 28 0 0 100 0 0 50 ### 0.0% ### ### 7 Salmonella choleraesuis ssp cholerae
Salmonella Paratyphi A 0 0 91 0 11 0 0 0 99 11 0 98 0 7 0 99 0 0 100 0 0 38 ### 0.0% ### ### 7 Salmonella Paratyphi A
Salmonella spp 2 99 99 0 83 0 1 0 93 69 0 92 2 53 3 94 2 1 100 0 0 40 ### 0.0% ### ### 3 Salmonella spp
Salmonella typhi 0 99 0 0 2 0 0 0 1 1 0 0 0 30 0 70 0 0 99 1 0 65 ### 0.0% ### ### 8 Salmonella typhi
Serratia ficaria 82 0 0 0 100 0 0 100 55 0 0 0 0 0 95 96 0 0 100 3 0 39 ### 0.0% ### ### 7 Serratia ficaria
Serratia fonticola 100 75 99 1 40 0 98 99 90 51 97 55 1 98 20 99 98 0 100 1 0 26 ### 0.0% ### ### 1 Serratia fonticola
Serratia liquefaciens 88 76 94 1 66 0 1 84 47 26 3 1 10 23 97 99 74 0 100 70 0 6 ### ### ### ### 1 Serratia liquefaciens
Serratia marcescens 57 98 99 1 82 2 0 83 0 2 25 0 0 1 96 99 2 1 100 72 0 36 ### 0.0% ### ### 2 Serratia marcescens
Serratia odorifera 1 90 97 81 1 90 0 0 98 66 66 1 5 75 91 100 99 99 66 100 11 0 9 ### 0.5% ### ### 0 Serratia odorifera 1
Serratia odorifera 2 90 97 5 0 90 0 0 5 66 66 1 5 15 60 0 99 11 66 100 60 0 22 ### 0.0% ### ### 2 Serratia odorifera 2
Serratia plymutica 97 0 0 0 70 0 1 77 50 30 0 0 40 15 100 96 30 1 90 18 0 16 ### 0.0% ### ### 3 Serratia plymutica
Serratia rubidaea 98 73 0 1 81 0 47 99 73 73 92 1 2 92 99 99 99 0 100 89 0 20 ### 0.0% ### ### 2 Serratia rubidaea
Shigella sonnei 82 0 99 0 0 0 0 0 99 6 0 65 0 1 0 99 2 0 100 0 0 29 ### 0.0% ### ### 5 Shigella sonnei
Shigella spp 1 0 0 0 1 0 0 0 18 1 0 3 0 1 0 60 0 24 95 0 0 54 ### 0.0% ### ### 6 Shigella spp
Yersinia enterocolitica 65 0 77 85 1 0 0 31 40 30 0 1 31 1 70 61 7 41 98 1 0 3 ### ### ### ### 0 Yersinia enterocolitica
Yersinia pestis 61 0 0 1 0 0 0 99 1 1 0 1 0 1 0 1 0 0 100 0 0 59 ### 0.0% ### ### 5 Yersinia pestis
Yersinia pseudotuberculos 61 0 0 99 1 0 0 98 1 1 0 10 1 1 0 1 1 0 98 0 0 45 ### 0.0% ### ### 4 Yersinia pseudotuberculosis
Aeromonas hydrophila 92 19 0 0 41 1 0 26 26 1 0 8 41 1 96 99 0 99 98 59 100 27 ### 0.0% ### ### 4 Aeromonas hydrophila
Plesiomonas shigelloides 100 100 100 0 0 0 0 0 0 0 0 0 0 1 0 99 0 100 99 0 100 57 ### 0.0% ### ### 10 Plesiomonas shigelloides
Vibrio alginolyticus 1 1 0 0 1 0 0 7 0 0 0 0 1 0 98 92 0 92 82 0 98 53 ### 0.0% ### ### 7 Vibrio alginolyticus
Vibrio cholerae 95 89 80 1 72 1 1 0 3 10 0 0 0 0 100 70 0 98 100 70 100 37 ### 0.0% ### ### 4 Vibrio cholerae
Vibrio metschnikovii 0 0 0 0 25 0 0 0 0 0 0 0 0 0 100 100 0 75 100 50 0 42 ### 0.0% ### ### 8 Vibrio metschnikovii
Vibrio parahaemolyticus 0 2 2 4 14 40 0 0 84 0 0 0 0 0 0 99 0 99 100 0 100 55 ### 0.0% ### ### 8 Vibrio parahaemolyticus
Vibrio vulnificus 73 2 1 1 13 13 0 5 1 0 0 0 73 1 7 80 1 73 73 0 100 56 ### 0.0% ### ### 4 Vibrio vulnificus
Vibrio fluvialis 40 0 0 0 16 0 0 3 93 0 0 0 30 1 100 100 0 100 13 0 100 44 ### 0.0% ### ### 7 Vibrio fluvialis
Acinetobacter ou Pseudo 0 2 0 0 65 2 2 0 39 41 0 0 0 19 2 0 0 36 0 0 19 61 ### 0.0% ### ### 9 Acinetobacter ou Pseudomonas spp
1 Vibrio alginolyticus 0.976 0.67 1 Excellente Id TB typicité -
2 Vibrio cholerae 0.024 0.49 0 mauvaise indentifBonne typicité -
3 Vibrio metschikovii 0.000 0.13 2 mauvaise indentifmauvaise typicité -
4 Vibrio parahaemlyticus 0.000 -0.21 3 mauvaise indentifmauvaise typicité -
5 Aeromonas sobria 0.000 0.04 2 mauvaise indentifmauvaise typicité -
P(plus typique)
P(taxon/ profil)
P(taxon/ profil)
classement
taxons
BGUR
BNAG
AMAL
BGLU
AGLU
DARL
BGAL
AGAL
LARA
LARL
AspA
ODC
MAN
ADO
MNT
URE
RHA
SOR
ADH
MAL
GLU
SAC
GAT
TRE
5KG
LDC
CEL
PLE
nom
INO
IND
LIP
RP
T
profil + - - - - - - - - + + + + - - + + - - - - - - - - - - - - + - - ###
Budvicia aquatica 0 0 0 75 0 100 89 0 25 0 1 0 0 0 100 100 0 100 99 0 45 0 24 0 0 0 0 0 0 0 0 0 174 ### 0.0% ### ### 9 Budvicia aquatica
Buttiauxella agrestis 62 0 1 0 0 100 12 0 100 100 100 77 0 1 100 0 0 100 0 77 94 100 100 5 0 64 0 100 1 1 87 1 180 ### 0.0% ### ### 10 Buttiauxella agrestis
Cedecea davisiae 98 40 0 0 0 33 0 98 59 100 100 98 0 30 93 100 98 0 100 58 0 100 0 71 0 93 0 100 1 0 100 1 137 ### 0.0% ### ### 6 Cedecea davisiae
Cedecea lapagei 0 97 0 0 0 2 0 99 1 100 97 91 0 54 97 99 0 0 97 2 0 100 0 1 0 0 0 100 0 0 97 1 157 ### 0.0% ### ### 6 Cedecea lapagei
Cedecea neferi 0 93 0 0 0 72 0 100 28 100 100 100 0 8 100 100 100 0 100 1 0 100 0 8 0 72 0 100 93 0 100 0 165 ### 0.0% ### ### 9 Cedecea neferi
Citrobacter amaloniticus/fam 93 44 0 0 0 100 96 0 100 93 100 100 100 0 100 100 14 99 0 1 40 100 100 0 0 12 0 100 96 1 3 37 156 ### 0.0% ### ### 6 Citrobacter amaloniticus/fameri
Citrobacter koseri 100 99 0 0 0 100 100 0 100 73 100 100 89 0 100 100 17 100 100 4 0 100 99 89 100 95 0 89 65 1 100 1 183 ### 0.0% ### ### 9 Citrobacter koseri
Citrobacter freudii group 40 35 2 1 0 98 100 1 100 37 100 99 8 0 84 100 35 99 0 0 80 100 100 39 1 35 0 67 81 0 1 90 155 ### 0.0% ### ### 5 Citrobacter freudii group
Edwarsiella hoshinae 100 0 100 0 0 42 0 0 100 0 64 100 45 2 0 99 100 0 0 50 99 100 0 0 0 0 0 0 0 0 100 0 23 ### 0.0% ### ### 6 Edwarsiella hoshinae
Edwarsiella tarda 99 0 100 0 0 82 0 0 100 0 3 100 99 2 0 100 1 7 0 0 46 0 0 0 0 0 7 0 0 0 0 0 11 ### 0.0% ### ### 4 Edwarsiella tarda
Enterobacter aerogenes 98 11 100 1 0 94 0 0 0 100 100 100 0 17 100 100 100 100 100 0 100 100 100 99 100 98 1 100 100 0 100 100 186 ### 0.0% ### ### 14 Enterobacter aerogenes
Enterobacer amnigenus 97 53 0 0 0 99 0 0 22 97 100 100 0 1 99 100 46 100 0 0 99 100 100 0 0 91 0 100 46 0 99 0 169 ### 0.0% ### ### 6 Enterobacer amnigenus
Enterobacter asburiae 100 20 0 0 0 98 0 0 95 100 99 100 0 1 100 100 100 100 0 1 1 100 1 94 0 98 0 98 61 15 5 0 128 ### 0.0% ### ### 4 Enterobacter asburiae
Enterobacter cloacae 94 91 0 1 0 97 1 1 9 87 98 100 0 1 96 100 99 100 40 1 99 99 98 29 40 83 2 100 40 1 98 0 164 ### 0.0% ### ### 3 Enterobacter cloacae
Enterobacter gergoviae 100 0 61 100 0 98 99 0 3 100 98 98 0 9 92 100 100 100 100 0 100 100 98 60 1 0 0 91 0 0 98 1 175 ### 0.0% ### ### 7 Enterobacter gergoviae
Enterobacter intermedius 99 0 0 0 0 98 83 0 77 100 98 92 0 0 99 100 28 100 0 33 71 100 95 0 0 100 0 100 50 1 98 2 167 ### 0.0% ### ### 5 Enterobacter intermedius
Enterobacter sakazakii 95 95 0 1 0 100 0 96 0 100 100 100 4 82 100 100 99 100 1 95 95 95 100 50 3 82 0 100 1 100 4 0 151 ### 0.0% ### ### 5 Enterobacter sakazakii
Enterobacter cancerogenus 99 98 0 0 0 99 0 0 0 100 100 100 0 1 100 100 1 100 0 0 0 100 100 0 0 1 0 99 0 1 100 1 166 ### 0.0% ### ### 6 Enterobacter cancerogenus
Escherichia coli 69 3 81 1 0 99 44 0 99 5 98 98 84 0 91 100 31 99 5 1 99 99 95 2 6 0 92 0 38 1 0 1 143 ### 0.0% ### ### 0 Escherichia coli
Escherichia fergusonii 100 1 100 0 0 100 1 0 100 7 98 92 97 0 98 98 0 98 98 0 0 100 82 0 98 0 0 35 0 0 0 0 163 ### 0.0% ### ### 6 Escherichia fergusonii
Escherichia hermanii 100 2 0 0 0 100 0 0 100 50 100 100 99 0 99 100 22 99 1 0 0 100 100 0 0 0 0 99 0 0 0 1 125 ### 0.0% ### ### 5 Escherichia hermanii
Escherichia vulneris 1 37 39 0 0 100 0 0 99 100 100 98 0 0 100 100 7 100 0 3 99 100 96 0 0 7 1 100 0 8 86 1 171 ### 0.0% ### ### 6 Escherichia vulneris
Aingella americana 0 0 0 0 0 1 96 26 62 99 99 1 0 22 99 100 0 0 100 52 0 100 8 0 0 0 0 1 0 0 0 1 140 ### 0.0% ### ### 6 Aingella americana
Hafnia alvei 97 1 88 1 0 97 0 1 69 19 99 99 0 1 73 100 1 75 0 13 0 99 36 0 0 0 0 0 0 0 56 51 14 ### 0.0% ### ### 2 Hafnia alvei
Klebsiella ornithicola 100 0 100 100 0 100 98 0 62 100 100 100 92 42 100 100 100 100 100 1 100 100 100 99 100 100 2 100 100 0 100 100 189 ### 0.0% ### ### 16 Klebsiella ornithicola
Klebsiella oxytoca 0 0 99 91 90 99 97 1 5 99 100 100 98 3 99 100 100 100 100 18 99 100 100 99 99 99 0 100 99 1 99 61 188 ### 0.0% ### ### 6 Klebsiella oxytoca
Klebsiella planticola 0 0 99 99 1 100 99 0 14 100 100 100 56 52 100 100 100 100 100 7 100 100 100 100 100 100 0 100 100 1 99 99 190 ### 0.0% ### ### 13 Klebsiella planticola
Klebsiella pneumoniae ssp 0 24 10 36 0 97 0 0 100 99 100 97 0 0 89 100 24 89 99 12 100 100 96 97 100 63 0 100 75 1 1 10 181 ### 0.0% ### ### 7 Klebsiella pneumoniae ssp ozaenae
Klebsiella pneumoniae ssp 1 1 98 98 0 89 2 1 11 100 99 99 0 1 99 99 99 100 95 1 99 100 98 97 92 99 0 99 99 10 89 9 185 ### 0.0% ### ### 3 Klebsiella pneumoniae ssp pneumoniae
Klebsiella pneumoniae ssp r 0 0 0 0 0 0 0 0 100 100 99 99 0 0 0 96 71 100 100 0 100 99 71 87 60 0 0 57 55 0 99 0 161 ### 0.0% ### ### 7 Klebsiella pneumoniae ssp rhinoscleromatis
Klebsiella ferrigena 0 0 99 0 0 92 98 0 8 100 100 100 0 1 100 100 100 100 100 8 100 100 100 100 100 100 0 100 53 0 100 8 187 ### 0.0% ### ### 14 Klebsiella ferrigena
Kluyvera ascorbata 100 0 63 0 0 100 97 1 100 100 100 100 97 3 100 100 100 100 1 89 100 100 100 0 0 100 0 100 2 3 97 50 176 ### 0.0% ### ### 9 Kluyvera ascorbata
Kluyvera cryocrescens 99 0 0 0 0 100 100 0 100 100 96 100 96 1 100 100 40 100 1 5 100 100 100 0 0 100 0 100 40 0 96 96 179 ### 0.0% ### ### 11 Kluyvera cryocrescens
Leclercia adecarboxylata 0 0 0 1 1 99 0 0 100 100 100 99 80 1 100 100 52 99 57 0 100 100 100 0 57 0 0 100 4 1 100 1 172 ### 0.0% ### ### 8 Leclercia adecarboxylata
Moerella wisconsensi 0 0 0 0 0 0 0 0 100 99 0 0 0 0 99 100 100 0 100 0 96 0 0 0 100 0 0 0 0 0 0 0 146 ### 0.0% ### ### 8 Moerella wisconsensi
Morganella morganii 97 0 1 100 0 0 0 0 99 0 0 0 94 0 1 97 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 15 ### 0.0% ### ### 6 Morganella morganii
Pantoea spp1 0 0 0 0 0 8 5 1 1 100 100 73 3 2 97 100 94 100 33 0 8 100 99 65 0 5 0 40 3 3 76 0 16 ### 0.0% ### ### 3 Pantoea spp1
Proteus mirabilis 98 1 0 100 0 0 0 0 69 0 0 1 0 0 0 99 1 0 0 1 0 99 0 0 0 1 0 0 0 1 0 98 138 ### 0.0% ### ### 4 Proteus mirabilis
Proteus penneri 0 0 0 100 0 0 0 0 100 0 0 100 0 0 0 100 99 0 0 100 0 58 0 0 0 99 0 0 0 100 0 99 139 ### 0.0% ### ### 7 Proteus penneri
Proteus vulgaris 1 0 1 98 0 1 0 0 99 69 1 99 87 0 1 99 94 1 0 99 1 53 1 0 0 96 0 0 1 96 0 95 12 ### 0.0% ### ### 0 Proteus vulgaris
Providencia alcalifaciens 0 0 0 0 99 0 0 0 100 0 0 0 74 0 0 100 1 0 0 0 0 0 0 0 98 0 0 0 0 0 0 99 150 ### 0.0% ### ### 6 Providencia alcalifaciens
Providencia rettgeri 0 0 0 99 99 0 0 0 100 58 64 0 40 0 1 100 1 0 94 0 0 0 64 98 100 0 0 0 0 0 0 58 159 ### 0.0% ### ### 5 Providencia rettgeri
Providencia rustigiani 0 0 0 0 0 0 0 0 100 0 0 0 74 0 0 100 12 0 0 0 0 0 0 0 1 0 0 0 0 0 0 96 17 ### 0.0% ### ### 6 Providencia rustigiani
Providencia stuartii 0 1 0 19 0 0 0 0 99 1 1 0 78 24 1 97 6 0 1 0 0 99 0 87 0 0 0 0 0 0 0 3 122 ### 0.0% ### ### 3 Providencia stuartii
Rhanella aquatilis 1 0 0 0 0 100 93 6 44 100 100 98 0 1 100 100 100 100 0 0 100 84 100 0 0 6 1 98 93 0 99 24 173 ### 0.0% ### ### 7 Rhanella aquatilis
Salmonella arizoneae 99 91 97 0 0 38 38 24 100 1 100 99 1 0 97 100 2 100 0 0 100 99 99 0 0 0 38 0 80 0 100 1 178 ### 0.0% ### ### 5 Salmonella arizoneae
Salmonella choleraesuis 10 3 99 0 0 0 100 87 100 0 100 100 0 0 0 100 0 0 0 0 100 12 100 0 0 0 0 0 99 0 0 0 168 ### 0.0% ### ### 8 Salmonella choleraesuis
Salmonella paratyphi A 89 2 0 0 0 0 99 1 100 0 100 99 0 0 0 100 0 100 0 0 100 99 100 0 0 0 0 0 24 0 0 1 154 ### 0.0% ### ### 8 Salmonella paratyphi A
salmonella typhi 0 0 7 0 0 0 0 12 100 0 100 100 0 0 0 100 0 0 0 7 99 92 0 0 0 0 0 0 92 0 0 0 118 ### 0.0% ### ### 6 salmonella typhi
Salmonella spp. 99 98 99 0 0 0 98 92 100 0 100 100 1 0 1 100 0 98 0 1 99 99 99 84 0 0 1 0 99 0 1 2 182 ### 0.0% ### ### 4 Salmonella spp.
Serratia ficaria 0 0 0 0 61 9 94 0 12 100 100 100 0 2 89 100 100 100 100 50 89 100 69 99 87 46 0 97 99 41 0 94 170 ### 0.0% ### ### 5 Serratia ficaria
Serratia fonticola 98 0 1 1 98 99 1 40 100 98 98 80 0 41 100 100 19 98 98 4 98 100 98 98 98 73 0 1 95 0 98 89 184 ### 0.0% ### ### 5 Serratia fonticola
Serratia liquefaciens 99 1 64 1 0 0 100 24 7 100 99 97 0 40 94 100 100 100 0 94 99 100 2 99 0 53 0 1 97 99 0 99 145 ### 0.0% ### ### 4 Serratia liquefaciens
Serratia marcescens 99 0 97 1 34 29 98 60 5 100 92 99 0 50 95 100 99 0 0 69 0 99 0 79 62 0 0 1 76 0 0 97 25 ### 0.0% ### ### 2 Serratia marcescens
serratia odorifera 60 1 93 0 64 33 0 1 58 100 100 99 100 66 100 100 66 99 1 8 100 100 100 100 99 0 0 100 100 2 0 99 177 ### 0.0% ### ### 7 serratia odorifera
Serratia plymutica 0 0 0 0 0 1 85 1 44 100 93 62 0 98 100 100 99 100 0 84 84 100 0 75 0 37 0 98 56 37 0 75 141 ### 0.0% ### ### 5 Serratia plymutica
Serratia proteamaculans 99 0 33 0 0 0 100 9 91 97 100 19 0 50 80 100 100 91 0 97 80 100 0 97 0 2 0 8 38 21 0 33 21 ### 0.0% ### ### 3 Serratia proteamaculans
Serratia rubidaea 0 2 54 1 2 40 2 2 3 100 97 100 0 89 100 100 99 100 89 50 100 100 0 99 89 2 0 96 2 55 75 2 153 ### 0.0% ### ### 6 Serratia rubidaea
Shigella ssp1 0 0 0 0 0 2 0 0 99 0 75 0 2 0 0 100 0 97 0 0 97 54 0 0 0 0 36 0 10 0 0 0 131 ### 0.0% ### ### 5 Shigella ssp1
Shigella sonnei 96 0 0 0 0 12 68 0 100 3 100 60 0 0 99 100 0 99 0 3 92 99 52 0 1 0 96 0 1 1 0 1 144 ### 0.0% ### ### 3 Shigella sonnei
Yersinia enterocolitica 85 0 0 99 0 99 40 1 100 66 99 70 73 3 98 100 99 99 58 1 0 100 0 66 1 4 10 99 99 0 0 1 147 ### 0.0% ### ### 3 Yersinia enterocolitica
Yersinia frederiksenii 57 0 0 98 0 100 57 1 100 100 100 80 90 2 99 100 99 100 98 1 0 100 31 80 0 2 4 98 100 0 0 1 162 ### 0.0% ### ### 6 Yersinia frederiksenii
Yersinia intermedia 98 0 0 96 0 100 90 1 100 100 100 100 85 1 100 100 100 99 57 26 40 100 1 76 1 83 0 100 100 0 0 0 160 ### 0.0% ### ### 7 Yersinia intermedia
Yersinia kristensii 36 0 0 89 0 99 63 0 100 60 100 89 1 1 99 100 0 75 63 0 0 100 0 45 0 0 24 89 89 0 0 0 148 ### 0.0% ### ### 4 Yersinia kristensii
Yersinia pseudotuberculosis 0 0 0 100 12 0 0 0 100 96 100 75 0 1 100 100 0 48 66 0 96 92 48 0 1 0 0 0 0 0 0 0 134 ### 0.0% ### ### 7 Yersinia pseudotuberculosis
Yersinia ruckeri 100 0 19 0 0 98 0 0 99 0 95 98 0 6 98 98 0 0 0 95 0 98 0 0 0 0 0 0 4 1 0 0 124 ### 0.0% ### ### 3 Yersinia ruckeri
Aeromonas hydrophila group 0 40 0 0 0 27 0 94 72 94 75 8 68 69 99 98 94 84 0 12 1 87 1 0 0 8 0 51 2 50 0 45 7 ### 0.0% ### ### 1 Aeromonas hydrophila group
Aeromonas sobria 0 25 1 0 0 0 0 23 28 13 27 54 59 35 100 83 61 6 0 6 4 54 0 0 0 36 0 33 0 27 0 6 5 ### 0.0% ### ### 2 Aeromonas sobria
Photobacterium damsela 0 96 0 71 0 0 0 42 100 55 0 96 0 94 3 96 0 0 0 3 0 50 0 0 0 3 0 14 0 0 0 87 127 ### 0.0% ### ### 6 Photobacterium damsela
Plesiomonas shigeloides 100 99 100 0 0 0 0 0 99 17 0 97 80 21 92 100 0 0 0 63 64 92 0 41 0 0 0 0 0 50 0 0 18 ### 0.0% ### ### 3 Plesiomonas shigeloides
Vibrio alginolyticus 75 0 1 0 0 0 0 1 46 99 60 89 99 0 0 100 100 0 0 24 2 100 0 0 0 0 0 17 1 97 0 0 1 ### ### ### ### 1 Vibrio alginolyticus
Vibrio cholerae 99 0 1 0 0 0 0 44 40 97 10 99 100 1 99 96 44 0 0 10 0 28 0 0 0 0 0 0 0 50 28 1 2 ### ### ### ### 0 Vibrio cholerae
Vibrio fluvialis 0 72 0 0 0 100 0 0 100 100 100 100 100 1 100 10 100 100 100 0 0 100 0 0 0 0 0 50 0 0 0 0 136 ### 0.0% ### ### 8 Vibrio fluvialis
Vibrio metschikovii 0 3 1 0 0 0 0 1 44 93 50 93 50 42 71 96 93 0 0 28 87 100 0 50 0 0 0 3 12 60 1 3 3 ### 0.0% ### ### 2 Vibrio metschikovii
Vibrio mimicus 99 0 1 0 0 0 0 1 100 0 5 95 100 1 100 95 0 0 0 0 0 37 0 0 0 0 0 0 0 0 1 42 10 ### 0.0% ### ### 5 Vibrio mimicus
Vibrio parahaemlyticus 97 0 1 8 0 0 0 1 100 97 24 100 97 0 21 97 0 86 0 0 9 100 0 0 0 0 0 2 0 97 0 0 4 ### 0.0% ### ### 3 Vibrio parahaemlyticus
Vibrio vulnificus 91 0 1 0 0 0 0 41 100 100 1 99 97 1 100 97 0 0 0 36 91 100 0 0 0 0 0 99 0 97 0 0 13 ### 0.0% ### ### 4 Vibrio vulnificus
Acinetobacter baumanii 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 79 0 89 0 0 0 0 0 0 0 0 0 1 0 0 69 96 126 ### 0.0% ### ### 7 Acinetobacter baumanii
Acinetobacter/Moraxella spp 0 0 0 26 0 0 0 25 0 0 0 0 0 0 0 2 0 5 0 0 1 0 0 0 0 0 0 0 0 0 1 42 117 ### 0.0% ### ### 7 Acinetobacter/Moraxella spp
Agrobacterium radiobacter 0 0 0 100 40 0 0 0 0 100 0 0 0 36 100 0 0 0 0 100 100 0 0 0 0 0 0 0 0 75 0 0 158 ### 0.0% ### ### 10 Agrobacterium radiobacter
Alcaligenes spp. 0 0 21 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50 96 135 ### 0.0% ### ### 8 Alcaligenes spp.
Bordetella bronchiseptica 0 0 0 100 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 152 ### 0.0% ### ### 10 Bordetella bronchiseptica
Burkholderia cepacia 40 2 59 2 1 0 0 38 1 3 0 2 0 40 34 64 0 0 0 0 0 0 0 1 0 0 0 2 1 0 77 99 28 ### 0.0% ### ### 4 Burkholderia cepacia
Chryseobacterium indologen 0 0 0 96 0 0 0 87 0 60 0 0 40 1 3 0 0 0 0 96 0 0 0 0 0 0 0 0 0 96 0 100 119 ### 0.0% ### ### 6 Chryseobacterium indologenes
Chryseobacterium meningos 0 0 0 37 0 0 0 58 0 97 12 3 84 89 97 2 0 0 0 100 97 0 0 0 0 0 2 1 0 100 10 98 123 ### 0.0% ### ### 3 Chryseobacterium meningosepticum
Ochrobactrum anthropi 0 0 0 99 0 0 0 0 0 17 0 0 0 0 1 0 0 0 0 80 1 0 0 0 1 0 0 0 0 1 0 0 132 ### 0.0% ### ### 6 Ochrobactrum anthropi
Pasteurella aerogenes 78 0 0 97 0 2 0 0 100 0 0 97 0 0 100 78 78 50 0 0 0 0 0 66 0 0 0 0 0 0 0 0 19 ### 0.0% ### ### 6 Pasteurella aerogenes
Pasteurella haemolytica 0 0 0 0 0 0 0 0 5 3 50 71 0 0 96 71 87 3 0 33 28 28 3 50 0 0 3 0 66 3 0 0 6 ### 0.0% ### ### 2 Pasteurella haemolytica
Pasteurella multocida 21 0 0 0 0 0 0 0 59 0 2 0 90 0 1 2 33 0 0 0 0 9 0 0 0 0 1 0 1 0 0 2 8 ### 0.0% ### ### 3 Pasteurella multocida
Pasteurella pneumotropica 2 0 0 97 0 0 0 0 10 0 2 58 66 0 90 50 54 9 0 0 2 9 0 2 0 0 0 0 2 0 0 2 9 ### 0.0% ### ### 2 Pasteurella pneumotropica
Pseudomonas aeruginosa 1 99 0 78 0 0 0 86 0 1 0 0 0 0 0 69 0 5 0 0 1 0 0 0 0 0 1 0 0 1 81 41 142 ### 0.0% ### ### 4 Pseudomonas aeruginosa
Pseudomonas fluorescens 0 35 0 9 0 0 0 40 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 12 27 ### 0.0% ### ### 7 Pseudomonas fluorescens
Pseudomonas putida 0 99 0 0 0 0 0 58 0 0 0 0 0 0 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50 0 133 ### 0.0% ### ### 7 Pseudomonas putida
Pseudomonas/Comamonas s 0 16 0 5 0 0 0 21 0 4 0 0 0 0 3 7 0 0 0 13 1 0 0 0 0 0 2 0 0 1 11 33 22 ### 0.0% ### ### 5 Pseudomonas/Comamonas sp.
Shewanella putrefasciens 81 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 3 84 100 120 ### 0.0% ### ### 7 Shewanella putrefasciens
Sphingomonas paucimobilis 0 0 0 0 0 0 0 6 0 90 0 0 0 17 58 0 0 0 0 93 68 0 0 0 0 0 6 0 0 43 0 85 26 ### 0.0% ### ### 6 Sphingomonas paucimobilis
Weeksella virosa/Bergeyella 0 0 0 69 0 0 0 71 0 3 0 0 3 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 14 4 96 121 ### 0.0% ### ### 5 Weeksella virosa/Bergeyella zooheticum
1 Pseudomonas putida 0.966 0.38 1 Excellente Id Bonne typicité -
2 Alcaligenes faecalis 1 0.026 0.00 1 mauvaise indentifmauvaise typicité -
3 Comamonas testosteroni/Ps. alcaligenes 0.004 0.03 0 mauvaise indentifmauvaise typicité -
4 Pseudomonas fluorescens 0.002 -0.08 0 mauvaise indentifmauvaise typicité -
5 Acinetobacter baumannii/ calcoaceticus 0.001 -0.16 2 mauvaise indentifmauvaise typicité -
P(plus typique)
P(taxon/ profil)
P(taxon/ profil)
classement
taxons
PNPG
MNEa
MANa
NAGa
GNTa
GLUa
ARAa
MALa
CAPa
PACa
MLTa
ADIa
CITa
ADH
GLU
ESC
URE
NO3
GEL
TRP
API 20 NE 7.0 (02
OX
T
profil - - - + - - + - + - - - - - - + - + + + + ###
Achromobacter (Alcaligene 93 0 0 0 1 0 0 0 1 0 0 0 0 1 86 20 96 99 94 93 100 18 ### 0.0% ### ### 2 Achromobacter (Alcaligenes) denitrificans
Achromobacter (Alcaligen 81 0 0 1 0 0 1 0 99 0 30 1 1 1 100 81 94 99 98 96 100 9 ### 0.0% ### ### 1 Achromobacter (Alcaligenes) xylosoxydans
Acinetobacter baumannii/ 2 0 8 0 1 1 1 0 67 70 1 1 1 1 20 98 80 100 99 87 0 5 ### 0.1% ### ### 2 Acinetobacter baumannii/ calcoaceticus
Acinetobacter haemolytic 1 0 14 0 0 0 96 0 1 0 0 0 0 0 0 99 2 99 81 1 0 8 ### 0.0% ### ### 2 Acinetobacter haemolyticus
Acinetobacter junii/ johns 1 0 0 0 1 0 0 0 24 8 2 0 0 0 0 99 4 95 70 0 0 11 ### 0.0% ### ### 4 Acinetobacter junii/ johnsonii
Acinetobacter lwoffii 3 0 0 0 2 0 0 0 11 1 0 1 1 0 0 70 20 46 1 36 0 16 ### 0.0% ### ### 3 Acinetobacter lwoffii
Acinetobacter radioresiste 2 2 0 2 0 0 0 0 19 2 0 0 2 0 0 97 100 2 2 97 0 27 ### 0.0% ### ### 3 Acinetobacter radioresistens
Aeromonas hydrophilae/ c 99 89 99 78 1 89 97 98 99 80 78 99 99 99 95 84 1 99 37 1 99 57 ### 0.0% ### ### 0 Aeromonas hydrophilae/ caviae
Aeromonas salmonicida s 100 21 9 0 0 2 33 0 66 0 33 50 2 21 2 0 0 2 0 0 100 35 ### 0.0% ### ### 5 Aeromonas salmonicida ssp masoucida/ achromogenes
Aeromonas salmonicida ss 100 0 57 36 0 100 99 18 84 1 0 96 84 99 99 0 1 99 1 0 100 54 ### 0.0% ### ### 4 Aeromonas salmonicida ssp salmonicida
Aeromonas sobria 100 86 96 86 0 1 99 99 100 12 99 99 99 100 100 93 0 99 81 0 100 55 ### 0.0% ### ### 4 Aeromonas sobria
Agrobacterium radiobacte 98 0 0 0 65 99 1 99 100 100 100 100 99 99 90 2 0 100 0 1 99 62 ### 0.0% ### ### 5 Agrobacterium radiobacter
Alcaligenes faecalis 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 3 77 7 100 97 97 98 2 ### ### ### ### 1 Alcaligenes faecalis 1
Alcaligenes faecalis 2 78 0 0 0 0 0 0 0 3 0 0 0 0 0 99 73 91 100 69 73 100 15 ### 0.0% ### ### 2 Alcaligenes faecalis 2
Bergeylla zoohelcum 0 0 0 0 99 0 74 0 0 0 2 0 0 0 1 0 0 0 0 0 99 38 ### 0.0% ### ### 6 Bergeylla zoohelcum
Bordetella avium 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 99 100 100 100 95 14 ### 0.0% ### ### 3 Bordetella avium
Bordetella bronchiseptica 76 0 0 0 96 0 0 0 0 0 0 0 0 0 0 5 94 85 91 80 100 21 ### 0.0% ### ### 3 Bordetella bronchiseptica
Brevundimonas diminuta/ O 1 0 1 0 1 1 0 0 1 0 1 0 0 0 0 2 1 99 33 0 100 19 ### 0.0% ### ### 3 Brevundimonas diminuta/ Oligella urethralis
Brevundimonas vesiculari 16 0 0 0 0 98 12 34 72 1 1 3 10 72 1 1 1 40 0 0 98 30 ### 0.0% ### ### 3 Brevundimonas vesicularis
Burkholderia cepacia 39 0 24 1 1 46 70 72 100 75 99 96 99 8 97 99 93 100 99 99 91 32 ### 0.0% ### ### 0 Burkholderia cepacia
Burkholderia pseudomalle 100 0 0 98 0 5 100 0 100 0 99 100 100 0 100 100 99 100 99 94 100 31 ### 0.0% ### ### 4 Burkholderia pseudomallei
Wautersia paucula 1 0 0 0 23 0 1 0 1 1 0 1 0 1 89 89 86 99 96 14 98 12 ### 0.0% ### ### 1 Wautersia paucula
Chromobacterium violac 97 1 99 100 0 0 100 0 100 0 66 10 97 0 100 75 0 100 36 0 97 17 ### 0.0% ### ### 2 Chromobacterium violaceum
Chryseobacterium indolog 20 81 1 0 70 98 99 22 55 12 37 1 0 66 1 0 1 1 12 12 99 28 ### 0.0% ### ### 2 Chryseobacterium indologenes
Chryseobacterium mening 0 83 1 0 5 99 95 93 86 1 80 76 70 61 0 0 1 0 25 0 99 40 ### 0.0% ### ### 4 Chryseobacterium meningosepticum
Comamonas testosteroni/Ps 75 0 0 6 4 0 4 1 11 3 3 4 1 2 42 55 38 87 32 3 98 3 ### 0.4% ### ### 0 Comamonas testosteroni/Ps. alcaligenes
Delftia acidovorans 96 0 0 0 0 0 1 0 1 1 0 76 0 0 99 71 89 99 28 83 100 26 ### 0.0% ### ### 1 Delftia acidovorans
Mannheimia haemolytica / 95 0 2 0 0 2 0 85 0 0 0 0 0 0 0 0 0 0 0 0 85 47 ### 0.0% ### ### 7 Mannheimia haemolytica / Pasteurella trehalosi
Methylobacterium mesoph 21 0 0 0 76 0 0 0 21 40 0 0 1 0 7 0 5 75 8 0 99 22 ### 0.0% ### ### 4 Methylobacterium mesophilicum
Moraxella lacunata 90 0 0 0 0 0 99 0 0 0 0 0 0 0 0 0 0 9 1 0 99 29 ### 0.0% ### ### 4 Moraxella lacunata
Moraxella spp 34 0 0 0 0 0 1 1 1 0 0 1 0 0 1 17 1 0 1 1 99 34 ### 0.0% ### ### 2 Moraxella spp
Myroides spp 0 1 0 0 94 1 99 0 1 0 0 0 1 0 0 0 0 1 0 1 100 36 ### 0.0% ### ### 3 Myroides spp
Ochrobactrum anthropi 80 0 0 0 84 1 0 1 82 75 60 20 75 76 34 34 4 99 47 1 99 23 ### 0.0% ### ### 2 Ochrobactrum anthropi
Oligella ureolytica 71 0 0 0 99 0 0 0 1 0 0 0 0 0 1 1 1 95 95 26 96 24 ### 0.0% ### ### 2 Oligella ureolytica
Pasteurella aerogenes 100 0 97 0 100 0 0 100 99 75 97 1 80 99 97 0 0 95 0 0 77 60 ### 0.0% ### ### 8 Pasteurella aerogenes
Pasteurella multocida 96 96 1 0 0 0 0 10 1 0 2 1 1 2 1 0 1 1 0 0 86 52 ### 0.0% ### ### 5 Pasteurella multocida
Pasteurella pneumotropica 100 61 26 0 85 0 0 83 6 1 6 0 6 3 6 0 1 6 0 0 84 51 ### 0.0% ### ### 6 Pasteurella pneumotropica
Pasteurella spp 96 1 2 2 1 1 1 4 19 1 1 1 1 1 1 0 1 13 1 0 87 33 ### 0.0% ### ### 2 Pasteurella spp
Photobacterium damsella 99 0 94 99 99 2 0 11 11 0 6 0 1 6 0 0 0 63 0 0 100 39 ### 0.0% ### ### 4 Photobacterium damsella
Plesiomonas shigelloides 99 99 98 98 0 0 0 86 94 0 12 0 77 98 99 77 0 94 0 0 99 53 ### 0.0% ### ### 3 Plesiomonas shigelloides
Pseudomonas aeruginosa 96 0 0 80 20 1 92 1 99 1 1 89 84 1 98 91 98 99 99 1 98 10 ### 0.0% ### ### 0 Pseudomonas aeruginosa
Pseudomonas fluorescens 27 0 0 80 1 1 39 1 99 71 97 89 85 1 99 99 10 99 99 16 99 4 ### 0.2% ### ### 0 Pseudomonas fluorescens
Pseudomonas luteola 78 0 13 71 1 100 30 98 99 99 99 88 12 76 85 62 1 94 94 1 2 45 ### 0.0% ### ### 1 Pseudomonas luteola
Pseudomonas mendocina 100 0 0 94 0 0 0 0 100 0 0 0 0 0 99 100 0 100 100 0 100 7 ### 0.0% ### ### 3 Pseudomonas mendocina
Pseudomonas oryzihabitan 0 0 0 0 1 0 11 1 100 99 99 100 0 84 99 88 2 99 99 0 1 46 ### 0.0% ### ### 3 Pseudomonas oryzihabitans
Pseudomonas putida 3 0 1 88 1 0 0 1 99 56 57 5 2 1 97 99 1 100 99 58 99 1 ### ### ### ### 1 Pseudomonas putida
Pseudomonas stutzeri 94 0 0 1 1 0 1 0 98 1 10 67 0 75 87 87 1 99 85 1 100 13 ### 0.0% ### ### 0 Pseudomonas stutzeri
Psychrobacter phenylpyru 60 0 0 0 95 0 0 0 1 0 0 0 0 0 0 0 1 3 1 0 100 42 ### 0.0% ### ### 4 Psychrobacter phenylpyruvicus
Ralstonia pickettii 32 0 1 1 3 0 1 0 96 35 1 10 14 0 99 86 62 99 98 16 99 6 ### 0.1% ### ### 0 Ralstonia pickettii
Shewanella putrefaciens g 96 0 1 0 1 71 95 0 6 11 0 0 95 10 1 71 1 90 2 0 100 20 ### 0.0% ### ### 2 Shewanella putrefaciens group
Sphingobacterium multiv 0 0 1 0 95 100 1 99 99 91 99 0 99 99 0 0 0 1 0 0 99 61 ### 0.0% ### ### 5 Sphingobacterium multivorum
Sphingobacterium spiriti 0 0 0 0 1 100 0 100 100 1 99 10 100 100 0 0 0 0 0 0 99 59 ### 0.0% ### ### 10 Sphingobacterium spiritivorum
Sphingomonas paucimobil 10 0 0 0 1 97 1 90 99 83 75 15 64 95 34 9 3 61 45 1 73 37 ### 0.0% ### ### 1 Sphingomonas paucimobilis
Stenotrophomonas maltoph 37 1 0 0 0 99 99 87 84 3 95 2 98 99 2 1 0 99 98 0 7 44 ### 0.0% ### ### 2 Stenotrophomonas maltophilia
Vibrio alginolyticus 98 93 93 0 0 65 91 10 76 1 18 75 57 74 76 1 0 99 1 0 99 41 ### 0.0% ### ### 2 Vibrio alginolyticus
Vibrio cholerae 99 100 99 0 0 1 99 99 88 0 30 78 75 97 98 1 0 99 97 1 100 56 ### 0.0% ### ### 2 Vibrio cholerae
Vibrio hollisae 100 100 31 0 0 0 0 3 10 67 68 0 24 1 41 0 0 94 0 0 100 48 ### 0.0% ### ### 7 Vibrio hollisae
Vibrio metschnikovii 0 50 64 0 0 7 100 50 100 0 71 99 99 99 99 17 0 99 50 0 0 50 ### 0.0% ### ### 3 Vibrio metschnikovii
Vibrio parahaemolyticus 99 99 100 1 6 1 98 97 90 81 82 99 51 98 90 0 1 99 21 1 99 58 ### 0.0% ### ### 2 Vibrio parahaemolyticus
Vibrio vulnificus 100 95 95 0 1 95 99 99 9 0 10 9 1 6 28 0 0 95 91 0 100 43 ### 0.0% ### ### 4 Vibrio vulnificus
Grimontia hollisae 100 100 31 0 0 0 0 3 10 67 68 0 24 1 41 0 0 94 0 0 100 48 ### 0.0% ### ### 7 Grimontia hollisae
Rhizobium radiobacter 98 0 0 0 65 99 1 99 100 100 100 100 99 99 90 2 0 100 0 1 99 62 ### 0.0% ### ### 5 Rhizobium radiobacter
Weeksella virosa/ Empedo 12 5 0 0 0 1 100 0 1 1 1 0 0 0 1 1 0 3 1 0 98 25 ### 0.0% ### ### 2 Weeksella virosa/ Empedobacter brevis
1 Enterococcus faecalis 0.920 0.42 0 Excellente Id Bonne typicité -
2 Lactococcus lactis ssp lactis 0.039 0.32 0 mauvaise indentifBonne typicité -
3 Listeria grayi 0.024 0.17 1 mauvaise indentifmauvaise typicité -
4 Streptococcus porcinus 0.008 0.08 0 mauvaise indentifmauvaise typicité -
5 Streptococcus uberis 0.005 0.12 0 mauvaise indentifmauvaise typicité -
P(plus typique)
P(taxon/ profil)
P(taxon/ profil)
classement
taxons
bHEM
bGUR
GLYG
PYRA
aGAL
bGAL
MAN
AMD
SOR
ADH
ESC
ARA
RAF
LAC
TRE
PAL
LAP
API 20 Strepto V7.
INU
HIP
RIB
VP
T
profil + - + - - - - - + + + - + + + + - - + - ? ###
Abiotrophia adiacens 0 0 10 80 0 25 0 0 99 0 0 0 0 0 0 0 0 0 0 0 0 45 ### 0.0% ### ### 8 Abiotrophia adiacens

Abiotrophia defectiva 25 0 15 99 100 0 100 0 92 0 0 0 0 0 98 100 5 92 99 0 0 44 ### 0.0% ### ### 6 Abiotrophia defectiva
Aerococcus viridans 1 13 50 96 54 33 16 37 1 5 1 83 33 85 70 83 99 33 41 70 33 1 8 ### 0.0% ### ### 0 Aerococcus viridans 1
Alloiococcus otitis 0 25 0 100 0 3 100 1 90 0 0 0 0 0 0 20 0 0 0 0 0 49 ### 0.0% ### ### 10 Alloiococcus otitis
Enterococcus avium 99 60 99 94 15 0 24 1 99 0 99 40 100 95 95 99 1 40 15 0 1 7 ### 0.1% ### ### 1 Enterococcus avium
Enterococcus durans 100 43 100 97 32 2 76 0 91 100 99 15 2 0 84 76 0 0 56 0 18 11 ### 0.0% ### ### 1 Enterococcus durans
Enterococcus faecalis 99 46 99 97 1 0 21 4 99 92 98 1 98 92 92 100 0 0 96 2 1 1 ### ### ### ### 0 Enterococcus faecalis
Enterococcus faecium 94 43 99 95 42 1 89 3 97 93 85 70 78 18 84 98 15 10 60 3 1 6 ### 0.2% ### ### 0 Enterococcus faecium
Enterococcus gallinarum 99 99 100 100 95 45 99 0 99 100 100 100 99 1 100 100 99 99 83 20 0 42 ### 0.0% ### ### 2 Enterococcus gallinarum
Gardnerella vaginalis 0 95 0 1 0 1 53 0 99 0 46 6 1 0 1 0 0 0 73 53 0 43 ### 0.0% ### ### 5 Gardnerella vaginalis
Gemella haemolysans 25 0 0 70 0 0 1 84 40 1 1 0 20 10 5 2 0 0 10 5 1 38 ### 0.0% ### ### 1 Gemella haemolysans
Gemella morbillorum 3 0 0 35 0 0 10 35 86 4 5 0 1 0 1 11 3 1 16 5 0 40 ### 0.0% ### ### 2 Gemella morbillorum
Lactococcus lactis ssp cre 98 25 41 1 23 0 18 4 88 0 27 0 17 0 97 30 0 15 25 0 0 13 ### 0.0% ### ### 2 Lactococcus lactis ssp cremoris
Lactococcus lactis ssp lact 90 40 99 35 3 0 35 3 96 95 95 15 45 1 72 87 4 5 90 3 1 2 ### ### ### ### 0 Lactococcus lactis ssp lactis
Leuconostoc spp 91 1 60 5 55 0 65 2 70 10 37 35 29 4 35 65 0 42 11 0 0 9 ### 0.0% ### ### 0 Leuconostoc spp
Listeria spp 97 79 98 0 0 0 0 0 85 0 6 0 0 0 49 92 1 1 72 0 26 17 ### 0.0% ### ### 3 Listeria spp
Streptococcus acidomoni 1 95 4 13 1 66 30 60 96 18 17 0 42 10 70 65 0 0 10 0 0 21 ### 0.0% ### ### 0 Streptococcus acidomonimus
Streptococcus agalactiae 100 99 1 1 4 79 1 96 99 99 98 0 1 1 50 87 0 1 35 4 75 25 ### 0.0% ### ### 0 Streptococcus agalactiae
Streptococcus anginosus 100 0 100 0 44 0 1 99 100 100 0 0 33 0 99 88 0 44 97 0 37 12 ### 0.0% ### ### 2 Streptococcus anginosus
Streptococcus bovis I 99 1 100 1 34 2 1 0 100 0 0 1 97 1 100 100 65 98 98 98 1 22 ### 0.0% ### ### 2 Streptococcus bovis I
Streptococcus bovis II.1 100 0 1 0 58 0 0 0 100 0 0 0 0 0 90 0 0 97 97 97 0 41 ### 0.0% ### ### 5 Streptococcus bovis II.1
Streptococcus bovis II.2 100 2 100 0 89 97 99 0 100 0 0 0 0 0 100 100 0 72 31 5 0 37 ### 0.0% ### ### 4 Streptococcus bovis II.2
Streptococcus canis 0 1 25 4 95 1 80 100 100 100 100 0 0 0 99 1 0 1 99 0 100 33 ### 0.0% ### ### 4 Streptococcus canis
Streptococcus constellatus 100 1 27 0 0 0 5 99 100 100 0 0 0 0 10 72 0 0 12 0 61 24 ### 0.0% ### ### 3 Streptococcus constellatus
Streptococcus dysgalactiae 0 0 1 1 1 99 0 100 99 100 99 0 1 50 86 100 0 1 99 30 2 23 ### 0.0% ### ### 2 Streptococcus dysgalactiae ssp dysgalactiae
Streptococcus dysgalactiae 0 1 25 1 1 99 1 99 100 97 97 1 1 1 45 99 0 1 98 40 94 27 ### 0.0% ### ### 1 Streptococcus dysgalactiae ssp equisimilis
Streptococcus equi ssp eq 1 0 1 0 0 100 0 100 100 100 0 0 0 0 0 1 0 0 100 100 100 46 ### 0.0% ### ### 7 Streptococcus equi ssp equi
Streptococcus equi ssp zo 0 1 15 0 0 100 1 99 100 99 85 0 0 99 100 0 0 0 99 99 99 34 ### 0.0% ### ### 4 Streptococcus equi ssp zooepidemicus
Streptococcus equinus 100 0 95 0 28 0 1 1 100 0 0 0 30 0 25 7 25 15 17 10 0 19 ### 0.0% ### ### 3 Streptococcus equinus
Streptococcus groupe L 0 75 1 0 0 100 1 100 100 100 100 0 0 0 75 100 0 0 100 98 94 39 ### 0.0% ### ### 5 Streptococcus groupe L
Streptococcus intermedius 100 0 87 0 0 0 44 99 100 100 0 0 0 0 99 99 3 3 99 0 40 16 ### 0.0% ### ### 3 Streptococcus intermedius
Streptococcus mitis 1 1 0 3 1 21 0 25 35 99 19 14 1 0 1 94 7 3 26 67 5 0 26 ### 0.0% ### ### 1 Streptococcus mitis 1
Streptococcus mitis 2 0 0 3 0 31 0 35 50 100 99 1 0 1 0 100 1 1 31 84 0 0 30 ### 0.0% ### ### 2 Streptococcus mitis 2
Streptococcus mutans 99 0 99 1 64 0 1 1 100 18 0 0 99 90 90 100 81 81 1 0 1 10 ### 0.0% ### ### 1 Streptococcus mutans
Streptococcus oralis 0 0 1 1 50 0 46 72 100 5 1 0 1 0 99 32 1 72 96 0 0 36 ### 0.0% ### ### 2 Streptococcus oralis
Streptococcus pneumonia 0 0 39 60 70 3 79 3 100 57 3 1 0 0 99 98 64 87 84 10 1 28 ### 0.0% ### ### 3 Streptococcus pneumoniae
Streptococcus porcinus 100 5 99 1 19 99 1 97 97 100 98 0 88 88 83 99 0 0 50 0 100 4 ### 0.8% ### ### 0 Streptococcus porcinus
Streptococcus pyogenes 0 1 5 98 0 15 0 100 100 99 0 0 8 1 99 98 0 1 61 22 98 31 ### 0.0% ### ### 3 Streptococcus pyogenes
Streptococcus salivarius 85 0 98 1 8 0 70 20 100 0 0 0 5 1 86 67 34 88 74 1 1 20 ### 0.0% ### ### 2 Streptococcus salivarius
Streptococcus sanguinis 0 1 42 0 63 0 1 5 100 90 0 0 1 48 83 98 33 55 67 0 0 14 ### 0.0% ### ### 2 Streptococcus sanguinis
Streptococcus suis I 0 1 82 53 80 94 76 1 100 91 0 0 7 0 94 100 75 0 100 89 0 29 ### 0.0% ### ### 3 Streptococcus suis I
Streptococcus suis II 0 1 70 41 91 91 52 3 100 95 0 0 3 1 99 98 63 93 99 96 2 35 ### 0.0% ### ### 2 Streptococcus suis II
Streptococcus uberis 99 98 100 35 10 86 5 30 100 98 99 0 99 98 99 99 87 10 50 20 0 5 ### 0.5% ### ### 0 Streptococcus uberis
46 ### 0.0% ### ### 10 0
ANCIENS 46 ### 0.0% ### ### 10 ANCIENS
Lactococcus plantarum 100 0 100 0 0 0 0 0 100 0 0 0 100 50 0 100 0 0 0 0 0 15 ### 0.0% ### ### 4 Lactococcus plantarum
Listeria grayi 100 0 100 0 0 0 0 0 80 0 90 0 100 10 60 100 20 30 90 0 0 3 ### ### ### ### 1 Listeria grayi
1 Globicatella sanguinis 0.596 -2.48 7 TB Id mauvaise typicité -
2 Enterococcus gallinarum 0.333 -2.85 5 Bonne Id mauvaise typicité -
3 Enterococcus cecorum 0.060 -2.82 8 mauvaise indentifmauvaise typicité -
4 Enterococcus casseliflavus 0.011 -3.06 6 mauvaise indentifmauvaise typicité -
5 Enterococcus faecium 2 0.000 -3.61 5 mauvaise indentifmauvaise typicité -
P(plus typique)
P(taxon/ profil)
P(taxon/ profil)
classement
taxons
rapid ID32 strep
T
MBDG
BMAN
v3.0
BGLU
CDEX
DARL
GLYG
BGUR
AGAL
BNAG
BGAL
LARA
PYRA
APPA
TAG
BgAR
URE
MAN
MAL
MEL
MLZ
ADH
GTA
LAC
SOR
TRE
RAF
SAC
PAL
PUL
HIP
RIB
VP
profil + - + + + + + + + + + + - + + + + + + + - + + + - + + - + + + + ###
Abiotrophia defectiva 1 0 50 0 99 0 0 0 0 50 100 50 0 50 99 75 0 0 0 0 95 100 5 0 100 0 0 0 1 0 0 1 39 ### 0.0% ### ### 15 Abiotrophia defectiva
Aerococcus viridans 1 70 3 30 60 0 28 75 25 79 91 42 1 0 10 83 0 0 92 10 10 95 4 0 100 1 0 65 1 1 1 0 19 ### 0.0% ### ### 8 Aerococcus viridans
Aerococcus urinae 0 0 0 100 0 0 91 100 78 0 0 0 1 1 0 0 0 0 100 0 0 0 0 0 97 0 81 0 0 0 0 0 48 ### 0.0% ### ### 20 Aerococcus urinae
Alloiococcus otitis 0 0 0 0 0 0 0 0 0 0 30 0 0 0 99 99 0 0 25 1 0 0 0 0 0 0 0 0 0 0 0 0 63 ### 0.0% ### ### 22 Alloiococcus otitis
Enterococcus avium 0 99 0 0 20 0 100 100 80 95 100 10 99 99 0 88 0 1 1 0 0 100 3 97 10 96 96 98 98 0 5 0 13 ### 0.0% ### ### 9 Enterococcus avium
Enterococcus casseliflavu 70 100 26 1 95 0 99 99 26 100 100 90 95 0 99 69 75 80 1 0 0 100 95 5 97 99 1 100 35 95 7 0 4 ### ### ### ### 6 Enterococcus casseliflavus
Enterococcus cecorum 0 100 11 88 100 94 98 38 11 100 100 88 66 0 33 0 88 94 1 27 0 100 98 55 100 0 0 98 64 41 66 0 3 ### ### ### ### 8 Enterococcus cecorum
Enterococcus durans 100 90 2 0 30 0 99 0 0 95 46 0 99 1 61 99 74 40 15 0 0 99 1 0 26 15 0 85 26 80 61 0 10 ### 0.0% ### ### 9 Enterococcus durans
Enterococcus faecalis 99 99 2 0 1 5 99 99 80 98 95 1 99 1 1 99 50 50 26 1 0 99 0 74 95 1 1 99 95 50 99 0 11 ### 0.0% ### ### 3 Enterococcus faecalis
Enterococcus faecium 1 99 99 10 1 50 0 99 98 1 99 95 0 99 1 95 99 50 8 38 1 0 99 30 0 99 100 0 83 8 15 90 1 7 ### 0.0% ### ### 4 Enterococcus faecium 1
Enterococcus faecium 2 100 88 1 0 99 0 99 99 1 99 99 99 99 0 66 99 2 1 25 1 0 99 99 0 66 99 0 44 2 17 91 1 5 ### 0.0% ### ### 5 Enterococcus faecium 2
Enterococcus gallinarum 99 99 26 10 93 1 99 99 2 100 100 74 99 0 99 98 95 90 99 0 0 100 90 0 99 99 1 100 74 50 90 0 2 ### ### ### ### 5 Enterococcus gallinarum
Enterococcus hirae 100 99 7 0 70 1 99 1 0 80 99 7 99 0 82 99 50 50 15 0 1 100 70 0 99 1 0 100 57 50 99 0 14 ### 0.0% ### ### 8 Enterococcus hirae
Enterococcus saccharolyti 0 100 1 0 100 0 0 100 99 99 100 100 1 0 1 0 99 99 0 0 0 100 100 100 100 0 99 100 0 0 100 0 17 ### 0.0% ### ### 15 Enterococcus saccharolyticus
Erysipelothrix rhusiopathi 42 1 99 0 0 28 0 0 0 75 0 0 0 64 0 100 80 85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 ### 0.0% ### ### 19 Erysipelothrix rhusiopathia
Gardnerella vaginalis 0 0 82 0 0 99 95 0 0 0 1 0 0 99 82 0 0 0 74 50 50 100 0 0 1 10 0 0 0 0 70 0 24 ### 0.0% ### ### 16 Gardnerella vaginalis
Gemella haemolysans 0 0 0 0 0 55 0 15 5 0 0 0 10 10 0 70 0 10 0 0 0 95 0 0 44 0 0 0 0 0 0 0 54 ### 0.0% ### ### 20 Gemella haemolysans
Gemella morbillorum 2 1 0 0 0 8 0 1 0 0 9 2 2 55 0 25 0 44 0 0 15 100 0 0 81 0 0 0 10 0 0 2 51 ### 0.0% ### ### 16 Gemella morbillorum
Globicatella sanguinis 1 70 17 17 95 4 75 82 35 60 95 89 0 25 95 40 0 0 60 82 50 95 89 0 100 45 0 70 35 45 0 0 1 ### ### ### ### 7 Globicatella sanguinis
Granulicatella adiacens 1 3 0 30 1 0 0 1 0 3 0 0 0 99 0 70 25 1 0 0 0 90 0 0 99 0 0 0 60 0 0 0 56 ### 0.0% ### ### 16 Granulicatella adiacens
Lactococcus garvieae 100 100 0 0 0 0 35 75 0 50 100 0 100 100 0 74 10 0 0 0 0 75 0 0 50 0 0 85 50 0 50 0 38 ### 0.0% ### ### 18 Lactococcus garvieae
Lactococcus lactis ssp cre 0 26 30 0 0 30 0 0 0 96 1 0 96 99 0 1 0 0 66 0 0 1 0 0 0 0 0 0 0 0
1 0 62 ### 0.0% ### ### 18 Lactococcus lactis ssp cremoris
Lactococcus lactis ssp lact 99 100 5 0 0 0 95 26 0 50 75 0 74 100 26 1 50 0 26 0 0 100 0 0 26 1 0 85 3 50 95 0 21 ### 0.0% ### ### 12 Lactococcus lactis ssp lactis
Lactococcus raffinolactis 0 100 5 0 100 74 0 50 5 100 100 74 99 100 0 0 74 0 0 0 0 100 25 5 100 26 0 5 0 0 90 0 23 ### 0.0% ### ### 14 Lactococcus raffinolactis
Leuconostoc spp 2 36 44 0 72 5 25 36 0 44 55 50 94 33 91 0 0 0 2 0 0 80 61 0 72 16 2 13 0 0 19 0 15 ### 0.0% ### ### 10 Leuconostoc spp
Listeria grayi 0 100 0 0 0 0 100 100 0 99 100 0 99 1 0 0 99 50 1 0 0 100 0 0 0 0 99 99 0 100 100 0 43 ### 0.0% ### ### 16 Listeria grayi
Listeria spp 0 100 0 0 0 30 1 0 0 22 97 1 70 0 5 0 99 95 74 0 0 99 0 0 1 0 80 99 5 100 92 0 32 ### 0.0% ### ### 14 Listeria spp
Streptococcus agalactiae 100 0 1 50 10 99 85 0 1 30 74 0 90 99 0 1 1 1 99 4 99 100 0 0 100 0 0 90 26 0 0 0 40 ### 0.0% ### ### 11 Streptococcus agalactiae
Streptococcus alactolyticu 0 50 0 1 89 1 0 74 5 0 26 83 100 100 0 0 0 1 1 1 1 100 10 0 99 0 0 50 0 0 0 50 49 ### 0.0% ### ### 14 Streptococcus alactolyticus
Streptococcus anginosus 99 100 22 0 27 97 5 25 0 62 92 27 97 97 2 0 1 2 0 0 60 99 20 1 100 5 0 89 7 5 0 1 33 ### 0.0% ### ### 9 Streptococcus anginosus
Streptococcus bovis I 0 100 1 0 42 1 1 99 0 99 100 61 99 99 1 1 1 1 0 98 95 100 3 0 100 0 0 100 1 58 0 0 59 ### 0.0% ### ### 12 Streptococcus bovis I
Streptococcus bovis II.1 1 1 7 0 92 0 0 0 0 82 0 98 100 100 0 0 1 1 0 82 82 100 64 0 100 0 0 0 0 1 0 0 52 ### 0.0% ### ### 17 Streptococcus bovis II.1
Streptococcus canis 99 1 1 26 85 100 99 0 0 85 26 1 1 100 74 0 0 1 5 0 99 100 0 0 99 0 0 99 0 0 0 0 44 ### 0.0% ### ### 13 Streptococcus canis
Streptococcus constellatus 100 11 2 0 0 100 2 2 0 19 80 0 100 100 5 0 2 5 0 0 2 99 0 0 97 2 0 77 0 0 0 0 50 ### 0.0% ### ### 15 Streptococcus constellatus
Streptococcus downei/sob 0 1 0 0 0 0 0 99 1 99 100 1 100 100 0 0 0 0 1 0 0 100 0 0 99 0 0 0 95 0 0 0 60 ### 0.0% ### ### 19 Streptococcus downei/sobrinus
Streptococcus dysgalactiae 99 0 1 100 0 100 99 1 26 99 100 0 0 100 1 0 0 1 1 15 100 99 0 0 100 0 0 0 74 0 1 0 28 ### 0.0% ### ### 12 Streptococcus dysgalactiae ssp dysgalactiae
Streptococcus dysgalactiae 99 3 5 85 0 98 97 0 0 50 99 0 1 99 1 0 0 1 2 30 99 100 0 0 99 1 0 60 1 0 24 1 34 ### 0.0% ### ### 10 Streptococcus dysgalactiae ssp equisimilis
Streptococcus equi ssp eq 100 1 0 100 0 100 0 0 0 0 0 0 0 100 0 0 0 0 0 100 100 100 0 0 100 0 0 99 0 26 70 0 53 ### 0.0% ### ### 21 Streptococcus equi ssp equi
Streptococcus equi ssp zo 100 1 0 100 0 100 25 0 90 98 0 0 0 100 0 0 0 0 0 100 99 100 0 0 100 0 0 98 0 2 98 0 41 ### 0.0% ### ### 17 Streptococcus equi ssp zooepidemicus
Streptococcus equinus 0 99 0 0 1 0 0 0 0 0 26 1 100 100 0 0 1 1 0 1 1 100 1 0 100 0 0 95 0 0 0 0 65 ### 0.0% ### ### 20 Streptococcus equinus
Streptococcus gordonii 95 95 90 0 28 100 0 0 0 85 99 4 0 100 1 0 0 35 0 0 0 99 1 0 100 0 0 74 1 90 1 0 30 ### 0.0% ### ### 13 Streptococcus gordonii
Streptococcus groupe L 100 0 0 99 0 99 100 0 0 85 100 0 0 100 0 0 1 1 74 95 100 100 0 0 100 0 0 0 0 1 70 0 26 ### 0.0% ### ### 15 Streptococcus groupe L
Streptococcus intermedius 86 90 99 0 0 99 4 2 0 100 99 0 100 100 89 0 97 51 0 0 97 97 0 2 100 2 0 27 1 20 0 0 29 ### 0.0% ### ### 13 Streptococcus intermedius
Streptococcus mitis 1 1 0 65 0 10 39 17 0 1 97 9 11 4 99 1 1 1 30 1 0 98 99 5 0 100 0 0 0 1 0 0 0 47 ### 0.0% ### ### 10 Streptococcus mitis 1
Streptococcus mitis 2 14 1 20 0 24 8 1 0 1 60 45 60 9 100 1 0 0 28 0 0 34 70 0 0 89 0 0 1 3 0 0 0 37 ### 0.0% ### ### 13 Streptococcus mitis 2
Streptococcus mutans 1 99 0 0 99 1 0 99 80 98 99 99 99 74 0 1 1 0 1 1 0 99 95 1 100 0 1 74 50 0 0 0 46 ### 0.0% ### ### 10 Streptococcus mutans
Streptococcus oralis 1 2 4 98 0 93 93 0 1 1 99 40 93 3 100 23 1 26 99 1 3 99 100 80 0 100 0 0 1 40 5 3 0 12 ### 0.0% ### ### 7 Streptococcus oralis 1
Streptococcus parasanguis 72 34 99 0 65 89 0 0 1 94 50 65 0 100 27 1 10 39 10 0 0 100 55 0 100 0 0 20 31 19 1 0 6 ### 0.0% ### ### 9 Streptococcus parasanguis
Streptococcus pneumonia 26 26 88 1 84 1 0 0 0 99 95 84 1 99 2 23 74 90 1 0 74 79 5 0 98 1 0 14 2 0 0 0 20 ### 0.0% ### ### 9 Streptococcus pneumoniae
Streptococcus porcinus 100 85 0 100 80 100 80 99 74 30 100 0 99 100 0 1 1 0 1 0 74 99 0 0 99 0 0 50 0 0 0 0 31 ### 0.0% ### ### 13 Streptococcus porcinus
Streptococcus pyogenes 98 0 0 15 0 100 1 8 0 99 99 1 1 99 0 99 0 1 0 35 85 99 0 0 99 0 0 97 0 0 35 0 35 ### 0.0% ### ### 13 Streptococcus pyogenes
Streptococcus salivarius 0 99 71 0 2 1 0 0 1 78 70 64 99 100 74 0 0 1 0 0 95 100 5 0 100 0 0 70 2 0 0 70 57 ### 0.0% ### ### 14 Streptococcus salivarius
Streptococcus sanguinis 1 86 38 23 0 54 0 5 3 93 89 99 46 1 99 3 0 1 97 6 0 100 100 38 0 100 3 0 19 37 1 1 1 16 ### 0.0% ### ### 8 Streptococcus sanguinis 1
Streptococcus sanguinis 2 70 58 10 0 60 2 2 4 4 81 97 52 0 98 2 0 2 74 0 0 77 100 26 0 100 1 0 21 18 1 1 2 22 ### 0.0% ### ### 7 Streptococcus sanguinis 2
Streptococcus suis I 95 60 36 99 85 9 0 5 0 98 100 0 0 100 15 50 40 45 0 85 100 85 0 0 100 0 0 70 5 20 2 0 8 ### 0.0% ### ### 11 Streptococcus suis I
Streptococcus suis II 99 85 25 90 100 1 0 1 0 99 99 100 0 100 36 30 10 41 0 99 100 99 5 0 100 0 0 90 2 20 5 2 9 ### 0.0% ### ### 8 Streptococcus suis II
Streptococcus thermophil 0 0 100 0 0 5 0 0 0 100 0 0 80 100 100 0 0 5 0 0 0 1 0 0 99 0 0 0 0 0 0 75 58 ### 0.0% ### ### 19 Streptococcus thermophilus
Streptococcus uberis 1 100 100 30 99 15 5 99 100 99 100 99 20 100 100 1 30 1 1 90 5 1 100 1 1 100 0 0 100 5 1 0 0 18 ### 0.0% ### ### 8 Streptococcus uberis 1
Streptococcus uberis 2 100 100 1 1 15 1 99 100 99 100 99 10 100 100 0 10 1 0 50 1 1 100 1 10 100 0 0 100 30 30 0 0 27 ### 0.0% ### ### 10 Streptococcus uberis 2
Streptococcus vestibularis 5 99 95 0 0 0 1 0 0 100 1 2 95 100 95 0 0 0 0 1 2 100 0 0 99 0 0 10 2 0 0 95 61 ### 0.0% ### ### 15 Streptococcus vestibularis
1 Micrococcus spp 0.582 0.72 0 TB Id TB typicité -
2 Kocuria varians/rosea 0.418 0.74 0 Bonne Id TB typicité -
3 Staphylococcus auricularis 0.000 -0.16 1 mauvaise indentifmauvaise typicité -
4 Kocuria kristinae 0.000 -0.29 0 mauvaise indentifmauvaise typicité -
5 Staphylococcus capitis 0.000 -0.18 1 mauvaise indentifmauvaise typicité -
P(plus typique)
P(taxon/ profil)
P(taxon/ profil)
classement
taxons
LSTR
MDG
MAN
MNE
NAG
ADH
GLU
SAC
URE
FRU
MAL
MEL
RAF
LAC
TRE
PAL
XYL
XLT
API 20 Staph v4.1
NIT
VP
T
profil + - - - - - - - - - - - - - - - - - - + ###
Staphylococcus aureus 100 100 95 96 88 91 80 0 0 83 97 78 1 0 97 2 90 80 80 0 18 ### 0.0% ### ### 2 Staphylococcus aureus
Staphylococcus auriculari 100 99 36 72 10 90 9 0 0 81 0 1 0 0 40 0 15 90 1 0 3 ### 0.0% ### ### 1 Staphylococcus auricularis
Staphylococcus capitis 100 99 80 43 22 2 36 0 0 86 23 90 0 0 50 0 1 85 35 0 5 ### 0.0% ### ### 1 Staphylococcus capitis
Staphylococcus caprae 100 99 70 10 75 74 10 0 0 99 95 99 0 0 0 0 1 99 60 0 13 ### 0.0% ### ### 1 Staphylococcus caprae
Staphylococcus carnosus 100 100 99 0 99 99 99 0 0 99 83 83 0 0 0 0 100 100 0 0 22 ### 0.0% ### ### 4 Staphylococcus carnosus
Staphylococcus chromoge 100 100 99 79 100 100 13 0 0 96 96 1 0 1 100 0 31 89 95 0 20 ### 0.0% ### ### 5 Staphylococcus chromogenes
Staphylococcus cohnii ssp 100 99 66 99 2 97 88 33 0 21 66 94 0 0 2 0 9 2 1 0 7 ### 0.0% ### ### 1 Staphylococcus cohnii ssp cohnii
Staphylococcus cohnii spp 100 100 99 98 98 100 94 64 0 1 94 87 0 0 0 0 98 0 99 0 21 ### 0.0% ### ### 3 Staphylococcus cohnii spp urealyticum
Staphylococcus epidermid 100 99 70 99 81 2 0 0 1 80 84 68 1 0 97 4 18 73 88 0 9 ### 0.0% ### ### 1 Staphylococcus epidermidis
Staphylococcus haemolyti 99 75 5 99 80 91 60 0 1 78 3 57 0 0 98 13 83 85 1 0 8 ### 0.0% ### ### 1 Staphylococcus haemolyticus
Staphylococcus hominis 98 94 41 97 50 86 28 0 1 82 27 70 1 0 97 4 50 43 84 0 6 ### 0.0% ### ### 1 Staphylococcus hominis
Staphylococcus hyicus 100 99 99 0 87 99 0 0 0 90 90 15 0 0 99 2 93 100 68 0 19 ### 0.0% ### ### 2 Staphylococcus hyicus
Staphylococcus lentus 100 100 100 100 100 100 100 7 99 92 21 57 100 100 100 28 100 0 1 0 23 ### 0.0% ### ### 11 Staphylococcus lentus
Staphylococcus lugdunens 100 89 88 99 66 99 0 0 0 99 16 99 0 0 100 0 90 1 50 0 17 ### 0.0% ### ### 2 Staphylococcus lugdunensis
Staphylococcus saprophyt 100 99 2 97 90 99 88 22 0 35 14 79 1 0 96 1 70 30 65 0 10 ### 0.0% ### ### 1 Staphylococcus saprophyticus
Staphylococcus schleiferi 100 80 100 0 1 71 0 0 0 99 97 99 0 0 0 0 94 99 0 0 14 ### 0.0% ### ### 2 Staphylococcus schleiferi
Staphylococcus sciuri 99 99 99 99 70 93 98 0 0 83 67 30 0 16 95 7 68 0 0 0 16 ### 0.0% ### ### 1 Staphylococcus sciuri
Staphylococcus simulans 100 100 57 11 95 92 73 4 0 83 27 38 0 4 97 2 90 97 84 0 11 ### 0.0% ### ### 2 Staphylococcus simulans
Staphylococcus warneri 99 99 50 98 19 96 70 0 0 23 16 90 0 0 99 0 6 77 97 0 12 ### 0.0% ### ### 1 Staphylococcus warneri
Staphylococcus xylosus 100 100 92 81 85 95 90 30 9 82 75 67 11 82 87 10 80 5 90 0 15 ### 0.0% ### ### 2 Staphylococcus xylosus
Kocuria kristinae 99 99 99 90 9 84 3 0 0 6 3 93 0 0 90 12 0 0 0 97 4 ### 0.0% ### ### 0 Kocuria kristinae
Kocuria varians/rosea 91 92 8 1 1 8 1 0 0 75 4 8 4 8 4 0 1 1 29 95 2 ### ### ### ### 0 Kocuria varians/rosea
Micrococcus spp 2 4 0 1 0 1 0 0 0 8 15 1 0 0 1 0 1 11 11 91 1 ### ### ### ### 0 Micrococcus spp
1 Staphylococcus aureus 0.533 0.33 1 TB Id Bonne typicité -
2 Staphylococcus warneri 0.441 0.42 0 Bonne Id Bonne typicité -
3 Staphylococcus simulans 0.016 0.17 1 mauvaise indentifmauvaise typicité -
4 Staphylococcus hominis 2 0.005 0.00 1 mauvaise indentifmauvaise typicité -
5 Staphylococcus xylosus 0.002 0.14 1 mauvaise indentifmauvaise typicité -
P(plus typique)
P(taxon/ profil)
P(taxon/ profil)
classement
taxons
NOVO
bGUR
bGAL
ODC
MAN
ArgA
MNE
NAG
PyrA
ADH
ESC
GLU
SAC
URE
FRU
MAL
TUR
ARA
RAF
LAC
TRE
CEL
PAL
ID 32 Staph V2.1
RIB
NIT
VP
T
profil + + - - + + + + + + + - + + - - - - - + + + - + - - ###
Staphylococcus arlettae 0 0 0 1 100 100 67 100 100 100 100 50 0 0 50 0 5 0 75 100 0 33 100 99 99 0 26 ### 0.0% ### ### 6 Staphylococcus arlettae
Staphylococcus aureus 74 82 0 0 100 100 100 100 95 99 94 2 96 97 1 1 99 35 1 98 98 84 3 0 1 0 1 ### ### ### ### 1 Staphylococcus aureus
Staphylococcus auriculari 0 40 0 0 100 100 0 30 0 40 0 0 74 0 0 100 0 12 0 40 0 1 0 0 0 0 30 ### 0.0% ### ### 8 Staphylococcus auricularis
Staphylococcus capitis 10 53 0 0 97 100 86 47 26 0 30 1 88 81 0 1 5 3 7 72 0 0 0 0 7 0 16 ### 0.0% ### ### 4 Staphylococcus capitis
Staphylococcus caprae 7099 0 0 100 99 100 29 83 75 26 0 99 87 0 0 91 67 0 0 0 1 0 0 0 0 14 ### 0.0% ### ### 3 Staphylococcus caprae
Staphylococcus carnosus 0 100 0 0 100 100 99 0 100 90 100 0 100 0 100 0 99 67 1 0 26 0 0 0 0 0 29 ### 0.0% ### ### 7 Staphylococcus carnosus
Staphylococcus chromoge 92 99 0 0 99 100 99 65 95 95 11 1 100 1 14 0 88 26 0 99 38 11 0 0 84 0 9 ### 0.0% ### ### 1 Staphylococcus chromogenes
Staphylococcus cohnii ssp 1 0 0 0 97 100 21 83 1 90 75 0 5 75 1 0 20 1 92 0 8 1 0 5 4 0 27 ### 0.0% ### ### 2 Staphylococcus cohnii ssp cohnii
Staphylococcus cohnii spp 99 0 0 1 100 100 90 99 75 100 99 0 1 67 67 0 75 75 99 0 75 0 0 99 1 0 19 ### 0.0% ### ### 3 Staphylococcus cohnii spp urealyticum
Staphylococcus epidermidi 94 74 1 1 100 99 39 100 79 0 0 0 74 97 1 0 94 1 2 98 1 87 0 0 1 1 12 ### 0.0% ### ### 3 Staphylococcus epidermidis 1
Staphylococcus epidermid 86 20 13 1 100 100 53 100 46 0 0 0 90 95 1 0 6 1 1 99 9 53 0 0 1 1 10 ### 0.0% ### ### 3 Staphylococcus epidermidis 2
Staphylococcus equorum 98 0 0 40 98 100 94 95 75 95 98 0 100 0 65 0 20 0 82 100 65 1 27 100 10 4 8 ### 0.0% ### ### 2 Staphylococcus equorum
Staphylococcus gallinaru 100 0 0 99 100 100 100 100 43 96 96 86 100 1 43 0 100 4 57 100 100 86 100 99 1 86 21 ### 0.0% ### ### 3 Staphylococcus gallinarum
Staphylococcus haemolyti 1 91 0 1 100 77 1 100 80 97 64 0 89 95 1 0 3 98 1 99 94 45 1 29 18 0 6 ### 0.1% ### ### 0 Staphylococcus haemolyticus
Staphylococcus hominis 1 92 6 0 1 100 99 1 100 45 89 5 0 92 93 0 0 1 5 5 91 73 93 1 1 7 0 7 ### 0.1% ### ### 0 Staphylococcus hominis 1
Staphylococcus hominis 2 81 73 0 1 100 99 75 100 94 98 1 0 94 99 0 0 94 1 6 99 13 99 1 0 6 0 4 ### 0.5% ### ### 1 Staphylococcus hominis 2
Staphylococcus hyicus 33 100 0 0 100 100 100 0 96 100 0 0 100 4 0 0 100 1 0 99 99 1 1 96 96 0 17 ### 0.0% ### ### 3 Staphylococcus hyicus
Staphylococcus intermedi 99 74 0 0 100 100 100 100 99 94 47 0 99 18 99 1 99 88 1 99 100 3 1 0 99 0 18 ### 0.0% ### ### 1 Staphylococcus intermedius
Staphylococcus kloosii 50 0 0 1 99 100 0 50 50 89 96 5 0 44 33 0 56 56 98 5 5 0 33 44 56 0 24 ### 0.0% ### ### 4 Staphylococcus kloosii
Staphylococcus lentus 7 0 0 100 100 99 100 85 99 100 100 100 100 5 1 0 35 10 26 100 80 70 26 0 26 100 22 ### 0.0% ### ### 5 Staphylococcus lentus
Staphylococcus lugdunens 65 1 100 0 100 99 94 88 74 94 1 0 99 99 1 0 1 99 1 100 76 1 0 0 1 0 20 ### 0.0% ### ### 2 Staphylococcus lugdunensis
Staphylococcus saprophyt 97 0 0 0 99 99 0 100 93 100 84 0 4 99 93 0 4 29 93 99 68 85 0 1 0 1 13 ### 0.0% ### ### 2 Staphylococcus saprophyticus
Staphylococcus schleiferi 0 97 0 0 100 80 100 0 3 66 0 0 89 97 26 0 100 49 0 0 74 0 0 0 0 0 28 ### 0.0% ### ### 7 Staphylococcus schleiferi
Staphylococcus sciuri 0 0 0 100 100 100 100 99 73 95 100 0 99 1 1 0 74 0 43 86 82 75 60 39 60 75 15 ### 0.0% ### ### 3 Staphylococcus sciuri
Staphylococcus simulans 90 99 0 0 100 100 49 8 97 97 74 0 95 18 79 0 2 82 5 94 90 0 1 74 21 1 3 ### ### ### ### 1 Staphylococcus simulans
Staphylococcus warneri 94 30 0 0 99 99 14 98 19 93 70 0 33 92 0 0 0 1 4 100 10 26 0 67 16 0 2 ### ### ### ### 0 Staphylococcus warneri
Staphylococcus xylosus 85 0 0 26 100 100 76 90 88 90 89 1 89 26 88 0 83 60 85 99 89 37 50 89 19 10 5 ### 0.2% ### ### 1 Staphylococcus xylosus
Aerococcus viridans 0 0 0 44 100 100 100 100 78 90 70 26 0 18 0 0 0 30 26 100 61 44 39 39 52 4 11 ### 0.0% ### ### 3 Aerococcus viridans
Dermacoccus nishinomiya 0 10 0 1 10 0 0 0 10 1 0 0 0 0 1 0 0 0 0 10 0 0 0 0 0 0 34 ### 0.0% ### ### 10 Dermacoccus nishinomiyaensis
Kocuria kristinae 0 0 0 0 100 100 100 87 20 99 0 0 0 13 20 7 7 93 7 100 0 27 7 0 7 0 25 ### 0.0% ### ### 6 Kocuria kristinae
Kocuria rosea 33 0 0 0 1 33 0 0 0 0 0 0 100 0 1 67 0 0 0 0 0 0 0 33 0 0 32 ### 0.0% ### ### 10 Kocuria rosea
Kocuria varians 100 0 0 0 100 40 0 0 74 20 0 0 80 0 90 0 0 10 0 1 0 0 0 0 0 0 31 ### 0.0% ### ### 8 Kocuria varians
Micrococcus luteus 38 0 0 0 0 0 0 0 0 5 0 0 5 0 1 92 10 74 0 0 0 0 0 0 0 0 35 ### 0.0% ### ### 12 Micrococcus luteus
Micrococcus lylae 0 11 0 1 0 11 0 0 0 1 0 0 11 0 1 44 0 44 0 0 11 11 0 0 0 0 33 ### 0.0% ### ### 9 Micrococcus lylae
Rothia mucilaginosa 8 0 0 67 92 100 100 100 1 92 0 0 100 100 25 92 33 75 8 92 0 92 8 0 8 0 23 ### 0.0% ### ### 4 Rothia mucilaginosa
1 Moraxella (Branhamella) catarrhalis / Moraxella spp 0.999 1.00 0 Excellente Id Excellente typicit -
2 Neisseria cinerea 0.001 0.45 1 mauvaise indentifBonne typicité -

3 Neisseria gonorrhoeae 0.000 0.08 1 mauvaise indentifmauvaise typicité -
4 Neisseria meningitidis (à confirmer par tests sérologiques) 0.000 -0.08 2 mauvaise indentifmauvaise typicité -
5 Neisseria spp (sicca, mucosa, subflava) 0.000 -0.28 2 mauvaise indentifmauvaise typicité -
P(plus typique)
P(taxon/ profil)
P(taxon/ profil)
classement
taxons
bGAL
ODC
ProA
URE
FRU
MAL
GLU
SAC
gGT
PAL
API NH V3.0 2007/01
IND
LIP
T
profil - - - - - - + - - - - - ###
Actinobacillus pleuropneumoniae 100 100 100 100 0 100 0 100 100 0 0 0 13 ### 0.0% ### -1.67 8 Actinobacillus pleuropneumoniae
Haemophilus aphrophilus/paraphr 100 96 99 96 0 0 0 100 88 0 29 0 12 ### 0.0% ### -0.94 3 Haemophilus aphrophilus/paraphrophilus/actinomycetemcomitans
Haemophilus influenzae 100 89 12 1 40 92 0 100 0 0 5 74 8 ### 0.0% ### -0.40 3 Haemophilus influenzae
Haemophilus paragallinarum 100 100 0 100 0 0 0 100 0 0 1 0 10 ### 0.0% ### -0.67 5 Haemophilus paragallinarum
Hemophilus parainfluenzae 100 94 94 97 73 55 0 97 30 0 5 11 11 ### 0.0% ### -0.65 2 Hemophilus parainfluenzae
Histophilus somni 100 100 0 0 100 0 0 0 0 0 0 50 6 ### 0.0% ### -0.33 4 Histophilus somni
Moraxella (Branhamella) catarrha 1 0 0 0 0 0 100 0 0 0 0 0 1 ### ### ### 1.00 0 Moraxella (Branhamella) catarrhalis / Moraxella spp
Neisseria cinerea 0 0 0 0 0 0 0 0 0 95 0 0 2 ### 0.1% ### 0.45 1 Neisseria cinerea
Neisseria gonorrhoeae 97 0 0 0 0 0 0 0 0 99 0 0 3 ### 0.0% ### 0.08 1 Neisseria gonorrhoeae
Neisseria lactamica 100 0 100 0 0 0 0 0 100 100 0 0 9 ### 0.0% ### -0.67 5 Neisseria lactamica
Neisseria meningitidis (à confirme 97 0 90 0 0 0 0 0 0 44 100 0 4 ### 0.0% ### -0.08 2 Neisseria meningitidis (à confirmer par tests sérologiques)
Neisseria polysaccharea 100 0 100 75 0 0 0 0 0 99 0 0 7 ### 0.0% ### -0.41 3 Neisseria polysaccharea
Neisseria spp (sicca, mucosa, subf 100 80 86 65 0 0 0 0 0 99 7 0 5 ### 0.0% ### -0.28 2 Neisseria spp (sicca, mucosa, subflava)
1 Listeria grayi 0.892 0.50 1 Excellente Id Bonne typicité -
2 Listeria innocua 0.107 0.33 2 mauvaise indentifBonne typicité -
3 Listeria monocytogenes 0.001 0.00 3 mauvaise indentifmauvaise typicité -
4 Listeria welshimeri 0.000 -0.20 2 mauvaise indentifmauvaise typicité -
5 Listeria seeligeri 0.000 -0.70 3 mauvaise indentifmauvaise typicité -
P(plus typique)
P(taxon/ profil)
P(taxon/ profil)
classement
b-hémolyse
taxons
D-XYL
aMAN
DARL
MDG
ESC
RHA
TAG
G1P
DIM
API Listeria 1.2

RIB
T
profil + - + + - + + + - - - ###
Listeria grayi 99 100 99 100 1 16 33 100 0 0 1 1 ### ### ### ### 1 Listeria grayi
Listeria monocytogenes 0 100 98 97 0 98 100 0 5 0 50 3 ### 0.1% ### ### 3 Listeria monocytogenes
Listeria innocua 99 100 98 100 2 66 98 0 0 0 1 2 ### ### ### ### 2 Listeria innocua
Listeria seeligeri 97 100 5 99 99 0 99 0 0 0 90 5 ### 0.0% ### ### 3 Listeria seeligeri
Listeria ivanovii 88 100 0 99 97 4 99 33 91 0 99 6 ### 0.0% ### ### 2 Listeria ivanovii
Listeria welshimeri 90 100 96 100 98 76 99 0 0 97 1 4 ### 0.0% ### ### 2 Listeria welshimeri
1 Actinomyces neuii ssp anitratus 0.999 0.63 1 Excellente Id TB typicité -
2 Brevibacterium spp. 0.000 0.20 1 mauvaise indentifmauvaise typicité -
3 Arcanobacterium haemolyticum 0.000 0.08 1 mauvaise indentifmauvaise typicité -
4 Corynebacterium jeikeium 0.000 -0.10 3 mauvaise indentifmauvaise typicité -
5 Corynebacterium group G Phosphatase Alcaline

0.000 -0.18 3 mauvaise indentifmauvaise typicité -
P(plus typique)
b GlucURonidase
P(taxon/ profil)
P(taxon/ profil)
NITrates réductase
b GALactosidase
PYraZinamidase
a GLUcosidase
classement
SACcharose
GLYCogène
Arylamidase
PYRolidonyl
GÉLatinase
CATalase
ESCuline
GLUcose
MANnitol
MALtose
taxons
LACtose
URÉase
XYLose
RIBose
bNAG
API CORYNE V2.1 (20
T
O
profil - + - + + + + - - - - - + + - - + - - - + ###
Actinomyces neuii ssp anitratus 0 100 0 63 0 100 100 0 0 0 0 0 54 89 10 10 36 0 10 0 99 1 ### ### ### ### 1 Actinomyces neuii ssp anitratus
Actinomyces neuii ssp neuii 99 100 0 1 0 100 100 0 0 0 0 0 97 89 24 89 89 1 75 0 100 6 ### 0.0% ### ### 1 Actinomyces neuii ssp neuii
Actinomyces radingae 0 100 0 0 0 100 100 100 100 0 0 0 42 50 35 0 42 0 0 0 0 16 ### 0.0% ### ### 5 Actinomyces radingae
Actinomyces turicencis 0 0 0 0 0 0 100 0 0 0 0 0 1 0 0 0 0 0 1 0 0 23 ### 0.0% ### ### 7 Actinomyces turicencis
Arcanobacterium bernardiae 0 100 71 0 0 0 100 0 0 0 0 0 50 100 0 0 100 0 0 100 0 13 ### 0.0% ### ### 5 Arcanobacterium bernardiae
Arcanobacterium haemolyticum 4 90 59 90 18 85 87 83 0 0 1 0 100 83 1 1 99 100 50 0 1 3 ### 0.0% ### ### 1 Arcanobacterium haemolyticum
Arcanobacterium pyogenes 1 1 98 71 99 96 98 47 1 0 99 0 100 100 96 1 99 94 56 19 1 15 ### 0.0% ### ### 0 Arcanobacterium pyogenes
Arthrobacter spp 31 100 62 56 37 56 75 14 31 1 50 0 1 1 0 0 0 0 0 0 100 7 ### 0.0% ### ### 1 Arthrobacter spp
Brevibacterium spp. 25 92 70 70 0 20 62 20 20 0 66 0 25 20 7 0 25 20 20 0 100 2 ### 0.0% ### ### 1 Brevibacterium spp.
Cellulomonas spp / Microbacterium42spp100 31 22 1 82 100 68 98 0 25 0 100 22 68 65 98 31 98 20 100 10 ### 0.0% ### ### 0 Cellulomonas spp / Microbacterium spp
Cellulosimicrobium cellulans 98 100 90 98 1 98 100 90 100 0 95 0 98 98 95 0 98 33 98 76 100 20 ### 0.0% ### ### 1 Cellulosimicrobium cellulans
Corynebacterium accolens 100 50 42 0 0 0 0 1 0 0 0 0 100 98 0 7 1 0 28 0 100 19 ### 0.0% ### ### 5 Corynebacterium accolens
Corynebacterium afermentans/c 0 100 76 100 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 100 17 ### 0.0% ### ### 5 Corynebacterium afermentans/coyleae
Corynebacterium argentoratens 0 100 0 55 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 100 12 ### 0.0% ### ### 5 Corynebacterium argentoratense
Corynebacterium auris/Turicella 0 100 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 18 ### 0.0% ### ### 6 Corynebacterium auris/Turicella otitidis
Corynebacterium bovis 1 42 58 100 0 90 0 0 1 60 0 0 42 1 0 0 0 0 0 0 100 11 ### 0.0% ### ### 3 Corynebacterium bovis
99
Corynebacterium diphtheriae ssp gravis 1 0 12 0 0 100 0 0 0 0 0 100 100 0 0 100 1 1 99 100 14 ### 0.0% ### ### 2 Corynebacterium diphtheriae ssp gravis
46 0
Corynebacterium diphtheriae ssp mitis/belfanti 0 1 0 0 96 0 0 0 0 0 100 99 0 0 100 0 3 3 100 8 ### 0.0% ### ### 3 Corynebacterium diphtheriae ssp mitis/belfanti
Corynebacterium glucuronolyti 58 100 27 1 100 14 1 0 37 62 1 0 100 47 33 0 27 2 97 0 100 9 ### 0.0% ### ### 0 Corynebacterium glucuronolyticum
Corynebacterium group F-1 71 100 0 1 0 0 0 0 0 99 0 0 99 28 0 0 100 0 100 0 99 21 ### 0.0% ### ### 4 Corynebacterium group F-1
Corynebacterium group G 17 99 42 99 0 0 0 0 1 0 0 0 100 100 0 1 50 0 92 0 100 5 ### 0.0% ### ### 3 Corynebacterium group G
Corynebacterium jeikeium 3 89 5 100 0 0 0 0 1 1 0 0 98 83 0 0 21 0 1 1 99 4 ### 0.0% ### ### 3 Corynebacterium jeikeium
Corynebacterium kutscheri 82 64 100 0 0 0 100 0 100 100 0 0 100 100 0 0 100 0 100 0 100 22 ### 0.0% ### ### 7 Corynebacterium kutscheri
Corynebacterium macginleyi 93 0 38 99 0 0 1 0 0 3 0 0 100 87 0 3 6 1 93 1 99 18 ### 0.0% ### ### 3 Corynebacterium macginleyi
Corynebacterium propinquum 71 71 35 60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 21 ### 0.0% ### ### 6 Corynebacterium propinquum
Corynebacterium pseudodiphthe 98 93 58 53 0 0 1 0 1 92 0 0 1 0 0 0 0 0 1 0 100 23 ### 0.0% ### ### 4 Corynebacterium pseudodiphtheriticum
Corynebacterium pseudotubercu 2 1 0 50 0 0 50 0 0 100 1 0 100 100 0 0 81 0 0 1 100 10 ### 0.0% ### ### 3 Corynebacterium pseudotuberculosis
Corynebacterium renale group 6 85 0 10 100 0 0 0 0 100 0 0 100 99 3 0 0 0 0 0 93 11 ### 0.0% ### ### 4 Corynebacterium renale group
Corynebacterium striatum amyc 57 97 15 97 0 0 1 0 2 13 0 0 100 45 0 1 71 0 69 1 100 5 ### 0.0% ### ### 2 Corynebacterium striatum amycolatum (minuti)
Corynebacterium ulcerans 1 1 1 99 0 1 99 1 1 99 1 0 100 99 1 1 99 1 13 99 100 12 ### 0.0% ### ### 1 Corynebacterium ulcerans
Corynebacterium urealyticum 1 98 0 50 0 1 1 0 4 100 0 0 0 0 0 0 0 1 0 0 100 22 ### 0.0% ### ### 5 Corynebacterium urealyticum
Dermabacter hominis 0 0 99 96 0 100 100 100 100 0 0 0 100 99 31 0 99 99 100 0 100 22 ### 0.0% ### ### 5 Dermabacter hominis
Erysipelothrix rhusiopathiae 1 7 70 0 0 8 0 96 0 14 0 0 67 45 0 0 1 60 0 1 0 23 ### 0.0% ### ### 4 Erysipelothrix rhusiopathiae
Gardnerella vaginalis 4 89 1 0 0 43 65 18 2 1 0 0 99 91 4 2 97 1 13 53 4 4 ### 0.0% ### ### 2 Gardnerella vaginalis
Listeria grayi 42 92 0 7 0 0 42 92 100 0 0 0 100 100 0 99 100 92 17 0 98 19 ### 0.0% ### ### 3 Listeria grayi
Listeria monocytogenes/innocu 2 66 0 69 0 4 99 99 100 0 0 0 100 1 3 0 100 64 8 0 100 12 ### 0.0% ### ### 2 Listeria monocytogenes/innocua
Listeria spp 2 29 0 58 0 1 94 73 100 0 0 0 100 28 95 0 100 32 2 0 100 11 ### 0.0% ### ### 2 Listeria spp
26 99
Microbacterium spp / Leifsonia aquaticum 10 57 0 63 100 80 95 0 52 0 0 0 0 0 0 0 1 0 99 15 ### 0.0% ### ### 4 Microbacterium spp / Leifsonia aquaticum
Oerskovia xanthineolytica (Cel. 98 100 90 98 1 98 100 90 100 0 95 0 98 98 95 0 98 33 98 76 100 20 ### 0.0% ### ### 1 Oerskovia xanthineolytica (Cel.turbata)
Propionibacterium acnes 24 0 63 36 54 89 63 100 0 0 1 0 89 63 0 2 0 0 0 0 100 6 ### 0.0% ### ### 3 Propionibacterium acnes
Propionibacterium avidum 0 9 66 0 0 100 66 97 90 0 78 0 97 90 0 2 78 0 66 0 100 11 ### 0.0% ### ### 2 Propionibacterium avidum
Rhodococcus spp 53 71 13 97 0 1 86 1 50 20 6 0 0 0 0 0 0 0 0 0 100 15 ### 0.0% ### ### 4 Rhodococcus spp
Rhothia dentocariosa 100 100 99 21 0 0 100 0 99 0 2 0 100 0 0 0 100 0 100 0 100 22 ### 0.0% ### ### 5 Rhothia dentocariosa
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
xxx 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 ### 0.0% ### ### 9 xxx
1 Campylobacter jejuni spp doylei 0.706 -4.56 1 TB Id mauvaise typicité -
2 Arcobacter cryaerophilus 0.133 -4.72 1 mauvaise indentifmauvaise typicité -
3 Campylobacter jejuni spp jejuni 1 0.067 -4.77 1 mauvaise indentifmauvaise typicité -
4 Helicobacter fennelliae 0.045 -4.90 2 mauvaise indentifmauvaise typicité -
5 Campylobacter mucosalis 0.016 -4.92 2 mauvaise indentifmauvaise typicité -
P(plus typique)
P(taxon/ profil)
P(taxon/ profil)
classement
taxons
API Campylo V2.1
PROP
GLUa
MLTa
AspA
ArgA
CITa
PyrA
ERO
URE
GGT
ACE
SUT
CAT
TTC
H2S
NAL
CFZ
EST
PAL
HIP
NIT
T
(2006/04)
profil + - + + - ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ###
Arcobacter cryaerophilus 20 82 68 0 0 42 0 0 0 82 0 0 57 5 1 76 35 6 0 0 99 2 ### ### ### ### 1 Arcobacter cryaerophilus

Campylobacter coli 0 99 80 0 1 63 0 73 0 77 0 0 98 10 79 61 73 20 25 30 100 14 ### 0.0% ### ### 2 Campylobacter coli
Campylobacter fetus spp fetus 0 97 24 0 1 54 0 55 0 14 0 0 98 79 35 71 3 55 7 2 100 15 ### 0.0% ### ### 2 Campylobacter fetus spp fetus
Campylobacter fetus spp venereali 0 91 1 0 0 30 0 27 0 0 0 0 94 43 2 36 0 26 0 0 100 18 ### 0.0% ### ### 2 Campylobacter fetus spp venerealis
Campylobacter hyointestinalis 0 70 9 0 0 50 0 28 0 27 72 0 98 75 5 95 4 60 4 4 100 11 ### 0.1% ### ### 2 Campylobacter hyointestinalis
Campylobacter jejuni spp doylei 0 0 29 100 55 33 0 11 3 92 0 0 55 0 6 40 0 37 25 0 100 1 ### ### ### ### 1 Campylobacter jejuni spp doylei
Campylobacter jejuni spp jejuni 1 0 98 68 91 0 43 10 4 1 81 0 0 91 4 84 47 2 84 33 1 100 3 ### ### ### ### 1 Campylobacter jejuni spp jejuni 1
Campylobacter jejuni spp jejuni 2 0 92 78 99 100 39 15 9 2 73 0 0 96 4 93 59 4 84 25 4 100 9 ### 0.3% ### ### 2 Campylobacter jejuni spp jejuni 2
Campylobacter jejuni ssp jejuni 3 0 100 100 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 100 12 ### 0.1% ### ### 3 Campylobacter jejuni ssp jejuni 3
Campylobacter lari 0 84 5 0 21 18 0 65 1 9 13 0 6 3 1 2 0 2 1 0 100 16 ### 0.0% ### ### 2 Campylobacter lari
Campylobacter lari spp UPTC 100 80 0 0 0 47 0 4 14 0 4 0 4 0 0 0 0 0 0 0 100 6 ### ### ### ### 2 Campylobacter lari spp UPTC
Campylobacter mucosalis 0 0 30 0 0 2 0 7 85 45 80 0 96 48 0 96 0 87 0 3 0 5 ### ### ### ### 2 Campylobacter mucosalis
Campylobacter sputorum bv Fecal 0 100 45 0 1 75 0 37 90 15 99 0 99 45 0 99 0 82 0 2 99 17 ### 0.0% ### ### 3 Campylobacter sputorum bv Fecalis
Campylobacter sputorum spp bubu 0 72 20 0 0 60 0 1 72 4 88 0 52 20 4 44 0 32 0 0 1 10 ### 0.3% ### ### 2 Campylobacter sputorum spp bubulus
Campylobacter upsaliensis 0 78 7 8 1 35 0 1 20 70 2 0 30 0 1 16 1 5 1 0 30 7 ### 0.7% ### ### 1 Campylobacter upsaliensis
Helicobacter cinaedi 0 81 5 0 0 3 0 0 0 14 0 0 15 0 0 31 5 6 0 0 100 13 ### 0.1% ### ### 2 Helicobacter cinaedi
Helicobacter fennelliae 0 5 88 0 0 1 0 25 1 90 0 0 40 0 0 0 12 70 0 0 99 4 ### ### ### ### 2 Helicobacter fennelliae
Helicobacter pylori 98 0 1 0 91 0 0 4 0 100 0 0 0 0 0 0 0 0 0 0 100 8 ### 0.5% ### ### 1 Helicobacter pylori
1 B.thuringensis 0.668 -4.88 1 TB Id mauvaise typicité -
2 Bacillus cereus 1 0.196 -4.88 0 mauvaise indentifmauvaise typicité -
3 Bacillus cereus 2 0.103 -4.94 0 mauvaise indentifmauvaise typicité -
4 Bacillus coagulans 0.020 -4.97 0 mauvaise indentifmauvaise typicité -
5 Bacillus licheniformis 0.005 -5.14 0 mauvaise indentifmauvaise typicité -
P(plus typique)
P(taxon/ profil)
P(taxon/ profil)
CITrate Simmons
classement
D-SACcharose
L-RHAmnose
L-ARAbinose
D-MELibiose
AMYgdaline
GÉLatianse
D-GLUcose
D-MANnitol
Lécithinase
D-SORbitol
MOBilité
OXydase
taxons
INOsitol
NITrites
INDole
ONPG
ODC
ADH
URE
ANA
LDC
TDA
Bacillus API 20E H2S
VP
T
profil + - + + - ? ? ? - - + ? ? ? ? ? ? ? ? ? ? ? ? ? ? ###
Aneurinbacillus aneurinilytic 9 9 0 0 66 0 9 0 0 9 9 33 9 0 0 0 33 9 9 9 0 90 18 ### 0.0% ### ### 2 Aneurinbacillus aneurinilyticus

B.thuringensis 100 1 99 0 0 99 0 0 0 0 99 99 99 1 1 1 1 50 50 1 1 0 99 90 90 1 ### ### ### ### 1 B.thuringensis
Bacilus anthracis 100 1 1 1 1 31 1 1 1 0 26 98 100 0 1 1 0 99 1 0 1 0 78 0 90 7 ### 0.2% ### ### 0 Bacilus anthracis
Bacillus amyloliquefac 0 85 0 0 0 75 0 0 0 0 50 99 99 50 99 99 1 99 50 99 50 0 95 90 0 25 ### 0.0% ### ### 3 Bacillus amyloliquefaciens
Bacillus cereus 1 100 4 71 1 1 28 1 2 1 1 43 98 100 1 1 1 1 55 1 30 1 0 74 90 90 2 ### ### ### ### 0 Bacillus cereus 1
Bacillus cereus 2 100 1 52 1 1 54 1 2 1 1 30 99 100 0 0 0 0 74 0 0 1 0 61 90 90 3 ### ### ### ### 0 Bacillus cereus 2
Bacillus circulans 50 87 1 1 1 4 1 1 1 1 28 15 100 20 89 20 45 99 92 99 96 0 13 90 0 13 ### 0.0% ### ### 0 Bacillus circulans
Bacillus coagulans 100 73 19 1 1 1 1 1 1 1 57 1 100 28 9 38 42 95 100 71 47 0 17 90 0 4 ### ### ### ### 0 Bacillus coagulans
Bacillus firmus 0 18 4 1 2 13 1 2 1 2 39 48 88 66 1 2 0 77 1 1 1 0 70 90 0 14 ### 0.0% ### ### 1 Bacillus firmus
Bacillus lentus 0 98 0 1 0 25 0 30 0 0 25 40 95 80 1 17 40 82 55 65 50 0 60 90 0 30 ### 0.0% ### ### 2 Bacillus lentus
Bacillus licheniformis 100 99 91 1 1 48 1 15 1 1 83 86 100 99 69 92 32 99 26 99 99 0 68 90 0 5 ### 0.5% ### ### 0 Bacillus licheniformis
Bacillus megaterium 0 92 1 1 1 11 1 1 1 1 40 95 100 97 55 39 8 98 90 73 87 0 15 90 0 27 ### 0.0% ### ### 1 Bacillus megaterium
Bacillus mycoides 27 48 1 1 34 1 1 1 1 55 89 100 4 1 1 0 57 1 12 1 0 68 1 0 8 ### 0.1% ### ### 1 Bacillus mycoides
Bacillus pumilus 0 99 1 1 1 40 1 1 1 1 86 95 99 99 11 2 14 99 15 62 88 0 2 90 0 29 ### 0.0% ### ### 1 Bacillus pumilus
Bacillus smithii 1 1 1 1 3 1 1 1 1 3 85 100 100 2 2 45 54 10 0 36 0 3 28 ### 0.0% ### ### 1 Bacillus smithii
Bacillus subtilis 0 95 5 0 0 89 0 5 0 0 99 95 99 99 99 99 1 99 50 99 99 0 94 90 0 20 ### 0.0% ### ### 2 Bacillus subtilis
Bacillus sphaericus/fus 0 12 1 1 1 23 1 32 1 1 17 49 6 9 2 1 1 6 1 1 1 0 18 90 0 22 ### 0.0% ### ### 1 Bacillus sphaericus/fusiformis/badius
Brevibacillus agri 0 0 0 0 0 94 0 0 0 0 94 100 42 94 21 0 0 0 0 0 0 0 0 90 0 17 ### 0.0% ### ### 3 Brevibacillus agri
Brevibacillus laterospo 100 1 1 0 0 11 0 1 0 5 66 66 98 61 1 5 1 5 0 38 1 0 42 90 0 6 ### 0.4% ### ### 1 Brevibacillus laterosporus
Brevibacillus choshine 0 19 7 1 1 15 1 9 1 1 40 41 23 22 3 1 1 5 0 1 1 0 39 0 0 12 ### 0.0% ### ### 1 Brevibacillus choshinensis/centrosporus/brevis
Geobacillus stearother 0 10 1 1 1 1 1 1 1 1 10 57 100 10 1 4 0 95 55 1 4 0 11 90 0 24 ### 0.0% ### ### 1 Geobacillus stearothermophilus
Geobacillus thermoglu 0 1 1 1 1 1 1 1 1 1 27 99 100 63 4 26 63 73 10 31 47 0 66 90 0 19 ### 0.0% ### ### 1 Geobacillus thermoglucosidiasus
Paenibacillus alvei 100 87 0 0 0 0 0 12 0 100 96 3 87 0 40 0 0 40 50 71 0 0 25 90 0 23 ### 0.0% ### ### 3 Paenibacillus alvei
Paenibacillus amyloliticus 99 1 1 1 1 1 8 1 1 30 2 100 99 1 0 53 100 100 100 84 0 69 31 ### 0.0% ### ### 1 Paenibacillus amyloliticus
Paenibacillus glucanolyticus 91 1 1 1 1 1 5 1 1 1 12 88 94 14 11 29 100 100 100 100 0 35 32 ### 0.0% ### ### 1 Paenibacillus glucanolyticus
Paenibacillus lautus 99 7 1 1 1 1 7 1 1 64 1 100 99 6 6 0 100 100 100 100 0 8 26 ### 0.0% ### ### 1 Paenibacillus lautus
Paenibacillus maceran 100 93 1 1 1 1 1 1 1 1 76 30 100 93 11 22 58 100 100 97 99 0 12 90 0 9 ### 0.0% ### ### 0 Paenibacillus macerans
Paenibacillus polymyx 100 97 2 1 1 2 6 1 1 1 56 70 100 99 1 0 2 100 100 100 93 0 37 90 0 11 ### 0.0% ### ### 0 Paenibacillus polymyxa
Paenibacillus thiamino 100 71 7 1 1 1 71 92 1 92 1 71 100 0 58 0 0 94 70 87 0 0 42 90 0 21 ### 0.0% ### ### 0 Paenibacillus thiaminolyticus
Paenibacillus validus 0 0 0 0 0 0 0 0 0 98 0 100 100 100 6 0 100 25 0 6 0 62 15 ### 0.0% ### ### 3 Paenibacillus validus
Sporosarcina pasteurii 100 1 1 1 1 1 1 99 1 1 1 1 1 1 1 1 1 1 50 1 1 0 99 90 0 16 ### 0.0% ### ### 0 Sporosarcina pasteurii
Virgibacillus pantothen 100 22 5 1 1 29 12 1 1 1 1 70 100 0 20 50 79 94 0 88 0 0 25 90 0 10 ### 0.0% ### ### 0 Virgibacillus pantothenticus
1 Paenibacillus macerans 0.574 -13.44 0 TB Id mauvaise typicité -
2 Paenibacillus lautus 0.193 -13.62 0 mauvaise indentifmauvaise typicité -
3 Bacillus circulans 0.136 -13.43 0 mauvaise indentifmauvaise typicité -
4 Bacillus coagulans 0.037 -13.42 0 mauvaise indentifmauvaise typicité -
5 Paenibacillus glucanolyticus 0.019 -13.78 1 mauvaise indentifmauvaise typicité -
P(plus typique)
P(taxon/ profil)
P(taxon/ profil)
classement
GLYG : 37
DARL : 45
DFUC : 43
LARL : 46
LFUC : 44
MAL : 28
taxons
GEN : 39
TAG : 42
GNT : 47
AMD :36
TUR : 40
LYX : 41
2KG : 48
5KG : 49
CEL : 27
TRE : 32
MEL :30
MLZ :34
SAC : 31
LAC :29
INU : 33
MDM : 20
RAF :35
XLT :38
MDG : 21
API 50 CHB V4.0
GLY : 1
DARA : 3
MAN : 18
ERY : 2
LARA : 4
DXYL : 6
MNE : 13
LXYL : 7
RHA : 15
NAG : 22
GAL : 10
GLU : 11
AMY :23
DUL : 16
ARB : 24
FRU : 12
SOR : 19
T
SAL : 26
INO : 17
MDX : 9
SBE : 14
ADO : 8
ESC :25
RIB : 5
profil + - + + - ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ###
Aneurinibacillus aneurinil 50 0 0 9 33 9 0 0 0 33 33 33 9 0 0 0 0 9 0 9 0 9 9 9 9 9 9 9 33 9 33 9 0 0 9 0 0 0 9 0 0 9 0 0 0 0 0 0 0 11 ### 0.2% ### ### 1 Aneurinibacillus aneurinilyticus

Bacillus anthracis 49 1 0 1 99 1 0 0 0 0 100 79 2 0 0 0 1 0 1 0 0 99 0 79 97 33 71 99 1 1 99 99 1 1 1 51 84 0 1 1 0 1 0 1 0 1 14 0 2 28 ### 0.0% ### ### 1 Bacillus anthracis
Bacillus cereus 1 74 0 1 1 99 1 0 0 1 8 100 99 26 0 1 0 1 1 1 1 3 97 30 99 99 88 88 100 3 1 55 99 1 1 2 83 77 1 3 2 1 0 0 1 0 1 47 0 1 27 ### 0.0% ### ### 0 Bacillus cereus 1
Bacillus cereus 2 11 1 0 0 77 1 0 0 0 3 100 99 1 0 0 0 0 0 0 0 0 99 0 43 68 24 2 100 10 0 74 97 0 0 0 65 63 0 0 1 0 0 0 1 0 0 20 0 0 24 ### 0.0% ### ### 2 Bacillus cereus 2
Bacillus circulans 48 0 18 96 80 98 1 1 68 94 100 97 97 1 45 1 20 89 20 32 64 84 99 96 100 99 99 99 92 92 99 99 52 50 96 99 92 26 98 85 1 1 1 21 21 10 61 11 8 3 ### ### ### ### 0 Bacillus circulans
Bacillus coagulans 71 0 4 47 66 52 0 1 1 98 100 100 98 1 42 1 9 28 38 4 66 100 71 76 83 76 76 100 66 100 95 98 1 1 61 95 23 0 61 61 0 0 0 1 57 0 61 4 0 4 ### ### ### ### 0 Bacillus coagulans
Bacillus firmus 41 0 0 4 20 7 0 0 0 1 88 50 11 0 0 0 1 66 2 0 2 63 1 4 55 1 11 92 1 1 77 58 1 0 1 48 3 0 1 0 0 1 0 0 0 0 7 0 0 17 ### 0.1% ### ### 1 Bacillus firmus
Bacillus lentus 40 0 1 50 55 10 0 0 10 55 95 95 95 0 40 17 1 80 17 1 35 82 65 82 98 75 75 98 82 55 82 82 25 30 75 75 55 0 50 40 0 10 0 0 4 0 1 0 0 7 ### 0.7% ### ### 0 Bacillus lentus
Bacillus licheniformis 90 1 1 99 97 87 1 1 1 75 100 100 99 8 32 1 69 99 92 1 99 62 99 99 100 99 99 100 44 26 99 99 50 1 44 99 87 1 60 75 1 91 1 1 1 1 39 0 0 13 ### 0.2% ### ### 0 Bacillus licheniformis
Bacillus megaterium 80 1 1 87 86 76 1 1 1 82 100 99 28 1 8 1 55 97 39 3 30 87 73 80 97 84 83 99 76 90 98 99 60 49 89 94 95 11 81 73 0 1 0 1 11 0 4 0 1 6 ### 0.8% ### ### 0 Bacillus megaterium
Bacillus mycoides 20 0 0 1 98 1 0 0 0 28 100 99 4 0 0 0 1 4 1 0 1 99 12 80 77 80 31 98 20 1 57 98 1 1 1 99 99 0 0 4 1 0 0 0 0 0 12 0 0 29 ### 0.0% ### ### 1 Bacillus mycoides
Bacillus pumilus 72 1 1 88 97 65 0 0 0 49 99 100 99 1 14 1 11 99 2 37 27 64 62 98 100 99 99 35 14 15 99 99 1 0 15 1 1 1 67 31 3 90 1 1 0 0 1 1 0 14 ### 0.2% ### ### 0 Bacillus pumilus
Bacillus smithii 89 0 0 36 97 97 0 0 0 36 100 100 75 0 45 0 2 100 2 0 89 0 0 2 24 10 24 100 0 10 54 100 0 0 0 0 0 0 0 54 0 0 0 0 24 0 10 0 0 18 ### 0.1% ### ### 1 Bacillus smithii
B. subtilis / B.amylolique 77 0 0 84 91 56 0 0 0 12 95 98 87 1 1 1 65 95 86 0 83 29 70 80 100 86 97 98 23 48 90 88 58 0 62 78 79 1 52 50 0 0 1 1 1 0 7 0 0 8 ### 0.5% ### ### 1 B. subtilis / B.amyloliquefaciens
Bacillus non reactive 1 1 0 1 1 2 0 1 1 2 6 10 2 1 1 0 2 9 1 1 1 24 1 1 19 1 1 5 2 1 6 5 2 1 1 1 1 1 1 1 1 0 1 0 1 1 1 0 1 26 ### 0.0% ### ### 1 Bacillus non reactive
Breibacillus agri 21 0 0 0 0 0 0 0 0 0 42 42 0 0 0 0 21 94 0 0 0 0 0 0 5 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 ### 0.0% ### ### 2 Breibacillus agri
Brevibacillus laterosporu 72 0 0 1 61 20 0 0 0 0 98 98 66 0 1 0 1 61 5 0 1 98 38 88 94 79 66 88 0 0 5 98 0 0 0 5 11 0 12 0 0 1 0 0 0 0 1 0 0 19 ### 0.0% ### ### 1 Brevibacillus laterosporus
Brevibacillus non réactive 13 0 0 1 8 2 0 0 1 0 23 19 1 0 1 1 3 22 1 0 1 6 1 2 37 2 5 6 1 0 5 8 1 0 2 1 1 1 1 1 0 1 1 0 1 0 0 0 1 22 ### 0.0% ### ### 1 Brevibacillus non réactive
Geobacillus stearothermo 45 0 0 4 17 1 0 0 0 25 100 98 98 1 0 1 1 10 4 0 50 4 1 4 30 25 17 100 10 55 95 75 0 75 55 95 82 0 4 50 1 4 0 0 0 0 0 0 1 16 ### 0.1% ### ### 1 Geobacillus stearothermophilus
Geobacillus thermoglucos 36 0 0 47 68 73 0 0 0 31 100 95 95 0 63 0 4 63 26 0 63 73 31 31 89 42 63 100 0 10 73 100 0 1 10 52 0 0 31 73 0 0 0 0 0 0 0 0 0 9 ### 0.4% ### ### 1 Geobacillus thermoglucosidiasus
Paenibacillus alvei 100 0 0 0 100 0 0 96 0 28 87 3 28 0 0 0 40 0 0 0 96 7150 87 100 87 50 100 0 50 40 28 0 0 40 50 28 0 40 28 0 0 0 0 0 0 12 0 0 25 ### 0.0% ### ### 3 Paenibacillus alvei
Paenibacillus amylolytic 26 0 0 84 84 100 0 0 93 100 100 100 100 0 53 0 1 99 0 46 100 93 100 100 100 100 100 100 100 100 100 100 6 53 100 100 100 0 100 100 0 0 0 6 0 0 0 0 0 10 ### 0.3% ### ### 1 Paenibacillus amylolyticus
Paenibacillus glucanolyti 61 0 38 100 100 99 11 0 72 88 88 100 88 0 29 11 14 94 11 20 94 100 100 100 100 100 100 100 100 100 100 100 55 75 100 99 99 5 100 100 0 0 0 27 0 0 27 0 1 5 ### ### ### ### 1 Paenibacillus glucanolyticus
Paenibacillus lautus 73 0 46 100 93 100 0 26 66 100 100 100 99 0 0 6 6 99 6 6 98 100 100 100 100 100 100 100 100 100 100 98 33 53 100 99 93 6 100 97 0 6 0 40 0 0 53 0 0 2 ### ### ### ### 0 Paenibacillus lautus
Paenibacillus macerans 77 0 51 99 82 99 1 1 82 100 100 100 99 0 58 0 11 93 22 22 77 40 97 99 100 97 99 100 100 100 100 100 88 62 99 99 99 5 97 93 1 0 0 37 51 0 74 1 3 1 ### ### ### ### 0 Paenibacillus macerans
Paenibacillus polymyxa 83 0 2 93 100 97 0 0 83 97 100 99 97 0 2 0 1 99 0 6 71 46 100 100 100 100 99 100 97 100 100 100 69 22 99 99 93 0 97 99 0 0 0 2 0 0 35 0 1 15 ### 0.1% ### ### 1 Paenibacillus polymyxa
Paenibacillus thiaminolyt 94 0 0 0 87 0 0 22 0 100 100 94 94 0 0 0 58 0 0 35 70 70 87 98 98 98 87 100 94 70 94 87 0 77 70 87 70 0 87 94 0 0 0 47 0 0 58 0 0 21 ### 0.0% ### ### 2 Paenibacillus thiaminolyticus
Paenibacillus validus 93 0 0 6 100 93 0 0 6 100 100 100 43 0 0 85 100 100 6 0 100 0 0 0 100 0 25 100 6 25 100 100 50 0 43 68 68 6 6 100 0 25 0 0 6 0 0 0 0 23 ### 0.0% ### ### 2 Paenibacillus validus
Virgibacillus pantothentic 55 0 44 0 88 0 0 0 0 98 100 100 98 0 79 0 20 0 50 1 100 100 88 100 100 100 38 100 20 0 94 100 0 0 0 98 5 0 27 66 0 98 0 61 0 0 33 0 0 12 ### 0.2% ### ### 1 Virgibacillus pantothenticus
1 Propionobacterium acnes 0.675 -5.38 0 TB Id mauvaise typicité -
2 Clostridium innocuum 0.051 -5.53 1 mauvaise indentifmauvaise typicité -
3 Clostridium cadaveris 0.045 -5.60 1 mauvaise indentifmauvaise typicité -
4 Clostridium difficile 0.042 -5.52 1 mauvaise indentifmauvaise typicité -
5 Eubacterium limosum 0.037 -5.64 1 mauvaise indentifmauvaise typicité -
P(plus typique)
P(taxon/ profil)
P(taxon/ profil)
classement
taxons
URÉase
API 20 A V4.0
SPORE
INDole
GRAM
COCC
MAN
SOR
MNE
GLU
SAC
ESC
RHA
MAL
ARA
GÉL
GLY
MLZ
RAF
CAT
LAC
TRE
CEL
SAL
XYL
T
(2006/02)
profil + - + + - ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ###
Actinomyces israelii 0 0 99 99 89 99 99 99 99 97 0 30 25 90 90 38 82 40 45 90 1 0 100 0 12 ### 0.6% ### ### 1 Actinomyces israelii

Actinomyces meyeri/odont 1 0 99 1 72 98 93 31 62 37 5 5 50 0 0 0 10 1 15 0 2 0 100 1 34 ### 0.0% ### ### 0 Actinomyces meyeri/odontolyticus
Actinomyces naeslundii 0 5 99 26 72 96 94 55 0 0 16 21 47 50 70 5 60 16 0 46 11 0 100 0 15 ### 0.4% ### ### 1 Actinomyces naeslundii
Actinomyces viscosus 1 0 0 99 0 65 9922 99 0 0 7 1 60 17 95 0 99 0 0 5 90 0 100 0 32 ### 0.0% ### ### 2 Actinomyces viscosus 1
Actinomyces viscosus 2 0 0 60 0 0 60 5 0 0 0 0 0 0 0 60 0 0 0 0 0 80 0 100 0 30 ### 0.0% ### ### 2 Actinomyces viscosus 2
Bacteroides caccae 0 0 100 0 100 100 75 0 100 100 0 90 10 0 100 25 100 0 60 70 0 0 0 0 42 ### 0.0% ### ### 3 Bacteroides caccae
Bacteroides distasonis 0 0 99 0 99 99 93 73 86 27 1 80 4 60 95 65 98 1 80 70 77 0 0 0 46 ### 0.0% ### ### 2 Bacteroides distasonis
Bacteroides fragilis 0 0 99 0 99 99 99 0 99 0 1 99 1 41 99 0 99 0 2 0 96 0 0 1 46 ### 0.0% ### ### 2 Bacteroides fragilis
Bacteroides ovatus/thetai 80 1 99 7 99 99 99 28 99 99 3 95 1 65 99 23 99 2 99 83 65 0 0 0 16 ### 0.3% ### ### 0 Bacteroides ovatus/thetaiotaomicron
Bacteroides stercoris/egger 99 0 99 1 92 25 90 10 75 70 10 65 0 30 99 0 30 0 65 0 50 0 0 0 13 ### 0.4% ### ### 0 Bacteroides stercoris/eggerthii
Bacteroides uniformis 91 0 99 0 99 99 95 97 99 95 3 99 0 99 99 1 98 0 42 1 9 0 0 0 25 ### 0.0% ### ### 1 Bacteroides uniformis
Bacteroides ureolyticus 0 99 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 55 ### 0.0% ### ### 3 Bacteroides ureolyticus
Bacteroides vulgatus 0 0 99 0 99 98 98 0 99 92 5 23 1 8 99 0 94 0 77 3 2 1 0 1 46 ### 0.0% ### ### 2 Bacteroides vulgatus
Bifidobacterium spp 1 0 0 99 30 99 99 99 70 60 75 2 40 0 40 70 20 91 25 0 35 0 0 99 0 33 ### 0.0% ### ### 1 Bifidobacterium spp 1
Bifidobacterium spp 2 0 0 99 99 99 99 99 99 90 80 1 75 45 99 99 85 100 75 50 99 0 0 99 0 20 ### 0.1% ### ### 1 Bifidobacterium spp 2
Clostridium barati 0 0 99 8 75 99 80 99 0 0 0 75 54 99 99 0 0 8 8 8 0 99 99 0 18 ### 0.1% ### ### 1 Clostridium barati
Clostridium beijerinckii/b 1 0 99 47 95 99 98 97 97 80 10 76 54 95 95 20 80 31 25 90 0 100 89 0 17 ### 0.1% ### ### 0 Clostridium beijerinckii/butyricum
Clostridium bifermentans 90 0 75 0 0 0 70 10 0 0 90 6 5 0 50 0 0 4 0 0 0 97 99 0 6 ### ### ### ### 1 Clostridium bifermentans
Clostridium botulinum/sp 20 0 55 0 0 1 72 0 0 0 99 20 1 1 1 0 0 1 0 40 0 99 99 0 11 ### 0.6% ### ### 1 Clostridium botulinum/sporogenes
Clostridium cadaveris 98 0 87 0 0 6 6 0 0 1 84 0 0 0 40 0 0 1 0 5 0 99 97 0 3 ### ### ### ### 1 Clostridium cadaveris
Clostridium clostridiofor 0 0 90 0 77 99 99 88 91 94 5 75 0 77 99 75 94 1 86 88 25 75 75 0 36 ### 0.0% ### ### 2 Clostridium clostridioforme
Clostridium difficile 0 0 99 80 0 0 0 20 5 0 44 30 0 5 66 83 0 5 1 5 0 98 99 0 4 ### ### ### ### 1 Clostridium difficile
Clostridium histolyticum 0 0 0 0 0 0 0 0 0 0 99 0 0 0 0 0 0 0 0 0 0 99 90 0 42 ### 0.0% ### ### 3 Clostridium histolyticum
Clostridium innocuum 0 0 99 99 0 46 0 99 5 15 1 45 1 99 99 4 1 0 0 25 0 99 99 1 2 ### ### ### ### 1 Clostridium innocuum
Clostridium paraputrificu 0 0 99 0 99 92 99 99 0 0 0 99 0 99 99 0 7 7 0 21 0 99 99 0 46 ### 0.0% ### ### 2 Clostridium paraputrificum
Clostridium perfringens 0 0 99 2 95 95 99 1 0 0 99 4 54 4 99 0 16 10 0 76 1 84 99 0 38 ### 0.0% ### ### 1 Clostridium perfringens
Clostridium ramosum 1 0 99 80 99 99 99 99 0 0 0 40 0 99 99 0 60 0 57 94 0 92 75 0 27 ### 0.0% ### ### 0 Clostridium ramosum
Clostridium septicum 0 0 99 1 99 0 94 94 0 1 75 35 0 76 99 0 0 0 1 84 0 99 99 0 46 ### 0.0% ### ### 1 Clostridium septicum
Clostridium sordellii 99 99 95 0 0 0 90 0 0 0 95 0 0 1 4 0 0 4 0 0 0 99 99 0 22 ### 0.0% ### ### 1 Clostridium sordellii
Clostridium spp 10 1 1 0 0 0 1 0 0 0 90 5 0 0 0 0 0 0 0 0 0 99 99 0 38 ### 0.0% ### ### 1 Clostridium spp
Clostridium tertium 0 0 99 99 99 99 99 99 70 0 0 35 0 99 99 62 0 1 0 85 0 99 99 0 20 ### 0.1% ### ### 1 Clostridium tertium
Collinsella aerofaciens 0 0 100 0 99 90 90 75 0 0 0 40 0 75 99 0 0 0 0 70 0 0 100 0 42 ### 0.0% ### ### 2 Collinsella aerofaciens
Eggerthella lenta 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 60 0 100 0 42 ### 0.0% ### ### 3 Eggerthella lenta
Eubacterium limosum 0 0 100 70 0 0 0 4 1 1 4 4 10 0 4 0 0 0 0 0 5 0 100 0 5 ### ### ### ### 1 Eubacterium limosum
Fusobacterium mortiferum 0 0 99 0 0 70 15 75 5 0 5 25 25 25 75 0 75 0 0 23 3 0 0 0 19 ### 0.1% ### ### 2 Fusobacterium mortiferum
Fusobacterium necrophor 94 0 1 0 1 0 0 0 0 0 2 0 0 0 0 0 1 0 1 0 0 0 0 0 23 ### 0.0% ### ### 1 Fusobacterium necrophorum/nucleatum
Fusobacterium varium 70 0 81 0 0 0 0 0 4 0 0 0 0 0 75 0 0 0 0 0 0 0 0 0 7 ### ### ### ### 1 Fusobacterium varium
Gemella morbillorum 0 0 100 8 5 90 100 8 0 0 0 5 0 5 100 0 5 5 0 20 0 0 100 99 14 ### 0.4% ### ### 1 Gemella morbillorum
Lactobacillus acidophilus/ 0 0 99 3 80 99 96 99 1 0 3 75 8 99 99 5 15 5 3 90 0 0 100 0 31 ### 0.0% ### ### 1 Lactobacillus acidophilus/jensenii
Lactobacillus fermentum 0 0 99 0 75 87 75 0 25 25 0 0 10 0 25 0 62 0 0 0 0 0 100 0 35 ### 0.0% ### ### 2 Lactobacillus fermentum
Peptoniphilus asaccharoly 93 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 18 0 98 99 24 ### 0.0% ### ### 2 Peptoniphilus asaccharolyticus
Peptostreptococcus group 0 5 5 0 1 0 1 1 0 0 27 0 0 0 0 0 0 0 0 0 5 0 94 100 40 ### 0.0% ### ### 2 Peptostreptococcus group
Porphyromonas asaccharol 80 0 0 0 0 0 0 0 0 0 50 0 0 0 0 0 0 0 0 0 3 0 0 3 26 ### 0.0% ### ### 2 Porphyromonas asaccharolytica
Porphyromonas gingivalis 1 0 99 0 99 99 90 1 99 88 1 90 2 5 99 1 99 0 79 80 10 0 0 0 46 ### 0.0% ### ### 1 Porphyromonas gingivalis
Prevotella bivia 1 0 99 1 99 0 99 1 1 1 50 0 80 0 99 0 0 0 1 0 0 0 0 1 46 ### 0.0% ### ### 0 Prevotella bivia
Prevotella intermedia/disi 32 0 99 0 0 35 98 0 0 0 70 1 4 1 85 0 19 0 1 1 1 0 0 3 9 ### ### ### ### 1 Prevotella intermedia/disiens
Prevotella melaninogenica/ 0 0 97 1 97 83 97 31 2 1 20 51 18 53 97 1 89 0 12 4 0 0 0 1 41 ### 0.0% ### ### 1 Prevotella melaninogenica/oralis
Prevotella oris/buccae 0 0 99 0 99 98 99 99 99 99 8 73 0 99 99 4 99 2 72 0 0 0 0 0 46 ### 0.0% ### ### 2 Prevotella oris/buccae
Propionobacterium acnes 67 0 97 20 1 5 0 0 0 0 69 0 97 0 97 0 0 10 0 1 89 0 100 1 1 ### ### ### ### 0 Propionobacterium acnes
Propionobacterium granu 0 0 99 41 0 82 31 0 0 1 18 0 99 0 98 25 35 0 4 67 79 0 100 0 8 ### ### ### ### 1 Propionobacterium granulosum
Propionobacterium propi 0 0 92 50 50 73 80 0 2 5 40 0 45 0 50 2 75 0 1 30 30 0 82 0 10 ### ### ### ### 1 Propionobacterium propionicum/avidum
Staphylococcus saccharoly 0 25 87 0 5 0 0 0 0 5 0 5 75 0 75 0 0 0 5 5 99 0 100 100 29 ### 0.0% ### ### 2 Staphylococcus saccharolyticus
Streptococcus constellatus 0 0 100 0 22 100 100 100 0 0 0 22 0 33 100 0 0 0 0 66 0 0 100 100 28 ### 0.0% ### ### 2 Streptococcus constellatus
Streptococcus intermedius 0 0 99 20 99 99 99 95 0 0 0 75 0 90 99 6 26 0 0 99 0 0 100 100 37 ### 0.0% ### ### 1 Streptococcus intermedius
Veillonella parvula 0 0 1 0 1 1 1 1 0 0 1 1 0 1 1 0 1 0 1 0 50 0 1 100 46 ### 0.0% ### ### 2 Veillonella parvula
1 Actinomyces viscosus 0.282 -7.25 0 Bonne Id mauvaise typicité -
2 Propionibacterium propionicum 0.191 -7.00 0 mauvaise indentifmauvaise typicité -
3 Actinomyces naeslundii 0.156 -7.16 0 mauvaise indentifmauvaise typicité -
4 Clostridium fallax 0.078 -7.39 0 mauvaise indentifmauvaise typicité -
5 Bacteroides caccae 0.023 -7.54 0 mauvaise indentifmauvaise typicité -
P(plus typique)
P(taxon/ profil)
P(taxon/ profil)
classement
taxons
rapid ID 32 A V3.2
T
bNAG
bGUR
bGAL
bGLU
aARA
aGAL
aGLU
aFUC
GGA
ADH
HisA
SerA
ArgA
LeuA
MNE
PheA
TyrA
GlyA
ProA
PyrA
bGP
AlaA
GDC
LGA
URE
RAF
PAL
IND
NIT
0
profil + - + + - ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ###
Actinomyces israelii 0 36 100 90 100 100 81

54 0 0 54 36 45 0 0 0 100 0 100 100 0 90 36 45 0 0 0 0 9 0 20 ### 0.6% ### ### 1 Actinomyces israelii
Actinomyces meyeri 0 7 0 92 15 100 7 0 7 53 7 7 15 0 7 100 100 76 100 100 7 90 58 100 0 0 0 69 46 91 40 ### 0.0% ### ### 2 Actinomyces meyeri
Actinomyces naeslundii 9 20 100 100 9 60 100 9 9 10 80 81 54 0 1 26 79 0 80 90 18 81 37 45 9 9 0 20 0 9 3 ### ### ### ### 0 Actinomyces naeslundii
Actinomyces odontolyticus 0 28 0 78 35 92 64 0 0 0 0 0 100 0 0 100 92 71 100 100 0 100 92 85 0 0 0 100 21 78 46 ### 0.0% ### ### 2 Actinomyces odontolyticus
Actinomyces viscosus 18 10 100 100 27 100 100 18 0 9 63 90 81 0 9 9 90 18 100 100 9 90 70 81 0 0 0 9 9 9 1 ### ### ### ### 0 Actinomyces viscosus
Anaerobiospirillum succinic 0 0 0 25 0 25 0 0 0 100 0 0 0 0 0 85 0 0 0 5 0 0 83 100 0 2 0 0 0 15 48 ### 0.0% ### ### 2 Anaerobiospirillum succiniciproducens
Anaerococcus prevotii 0 4 0 0 0 20 0 0 5 0 5 0 0 0 1 100 0 5 0 75 53 35 1 3 0 0 0 57 1 5 69 ### 0.0% ### ### 3 Anaerococcus prevotii
Bacteroides caccae 1 0 100 100 2 67 91 99 3 100 100 99 0 0 100 100 0 100 33 100 0 90 100 3 67 95 0 91 92 5 5 ### ### ### ### 0 Bacteroides caccae
Bacteroides capillosus 0 0 100 100 86 12 100 0 33 100 33 33 0 0 100 0 0 100 0 33 0 0 100 0 33 86 0 0 67 0 25 ### 0.3% ### ### 1 Bacteroides capillosus
Bacteroides distasonis 0 0 100 100 9 100 99 99 0 100 100 99 1 0 100 100 0 100 73 100 91 36 100 91 98 2 0 98 99 36 10 ### ### ### ### 1 Bacteroides distasonis
Bacteroides eggerthii 0 0 11 100 1 100 100 89 0 100 98 5 0 95 100 0 0 100 0 0 0 0 100 10 99 10 0 1 94 0 27 ### 0.3% ### ### 1 Bacteroides eggerthii
Bacteroïdes fragilis 0 1 100 100 3 99 88 2 4 99 98 98 1 0 100 85 0 99 55 94 4 80 99 4 97 97 0 40 85 2 9 ### ### ### ### 1 Bacteroïdes fragilis
Bacteroides merdae 0 0 100 100 70 81 0 100 15 100 69 15 0 0 100 100 0 100 23 100 53 33 100 100 30 46 0 54 76 30 19 ### 0.7% ### ### 1 Bacteroides merdae
Bacteroides ovatus 0 0 99 99 1 100 99 99 1 99 99 97 0 96 100 3 1 97 0 6 0 0 100 0 51 31 0 1 90 0 6 ### ### ### ### 1 Bacteroides ovatus
Bacteroides stercoris 0 0 15 100 1 100 90 3 0 100 100 99 0 100 100 1 0 100 1 1 1 1 100 1 22 17 0 1 100 0 23 ### 0.4% ### ### 1 Bacteroides stercoris
Bacteroides thetaiotaomicron 0 0 99 99 2 100 99 95 2 100 99 85 0 99 100 76 0 100 25 77 0 21 100 3 80 75 0 49 97 2 7 ### ### ### ### 1 Bacteroides thetaiotaomicron
Bacteroides uniformis 0 1 98 100 1 100 99 96 1 100 99 97 0 99 100 2 1 100 1 2 0 1 100 0 68 85 0 1 99 0 7 ### ### ### ### 1 Bacteroides uniformis
Bacteroides ureolyticus 82 30 0 0 0 1 0 0 0 0 0 0 32 0 41 41 13 8 5 41 0 5 22 24 43 0 0 5 3 1 42 ### 0.0% ### ### 2 Bacteroides ureolyticus
Bacteroides vulgatus 0 0 100 100 20 100 0 100 25 100 97 99 0 0 100 5 0 100 0 0 40 0 100 97 70 85 0 1 99 0 13 ### ### ### ### 1 Bacteroides vulgatus
Bifidobacterium adolescentis 0 0 100 100 99 100 100 50 0 0 1 25 0 0 1 50 100 0 25 25 0 25 0 50 0 1 0 25 1 1 33 ### 0.0% ### ### 1 Bifidobacterium adolescentis 1
Bifidobacterium adolescentis 0 0 100 100 50 100 100 99 0 0 90 99 0 0 1 90 100 0 90 88 0 90 0 90 0 1 0 10 1 1 14 ### ### ### ### 1 Bifidobacterium adolescentis 2
Bifidobacterium spp 0 0 100 100 9 100 91 45 0 64 99 93 0 1 5 100 99 27 99 91 9 99 64 99 0 9 0 91 1 91 10 ### ### ### ### 1 Bifidobacterium spp
Capnocytophaga spp 0 80 40 90 90 100 90 0 0 90 90 90 60 0 99 100 100 100 100 100 50 100 100 100 50 0 0 100 100 100 41 ### 0.0% ### ### 1 Capnocytophaga spp
Clostridium acetobutylicum 1 0 3 28 50 75 83 73 1 28 90 50 0 0 10 0 0 0 1 0 0 0 0 0 0 2 0 0 5 0 44 ### 0.0% ### ### 0 Clostridium acetobutylicum
Clostridium baratii 0 0 100 75 100 1 75 0 100 75 10 0 1 0 1 0 0 0 0 0 50 0 0 0 1 1 0 0 0 0 39 ### 0.0% ### ### 2 Clostridium baratii
Clostridium beijerinckii/but 0 0 93 87 76 95 28 49 3 10 30 28 1 0 0 0 0 0 0 0 7 0 0 1 3 0 0 0 0 0 21 ### 0.5% ### ### 1 Clostridium beijerinckii/butyricum
Clostridium bifermentans 0 0 0 0 0 10 2 0 0 10 0 0 0 67 0 0 65 0 8 21 0 17 0 0 0 10 0 0 0 0 58 ### 0.0% ### ### 3 Clostridium bifermentans
Clostridium botulinum 1 0 43 43 0 0 0 4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0 0 0 49 ### 0.0% ### ### 2 Clostridium botulinum 1
Clostridium cadaveris 0 0 0 1 0 0 1 0 0 100 0 0 0 96 0 0 3 0 0 0 97 0 0 0 0 5 0 0 0 0 58 ### 0.0% ### ### 2 Clostridium cadaveris
Clostridium clostridioforme 0 0 89 100 6 63 72 54 22 54 72 45 0 6 1 0 0 54 0 0 45 0 0 0 0 0 0 0 0 0 12 ### ### ### ### 1 Clostridium clostridioforme
Clostridium difficile 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95 0 0 630 0 0 0 1 0 0 0 0 0 58 ### 0.0% ### ### 3 Clostridium difficile
Clostridium fallax 73 5 25 90 79 15 5 0 70 20 25 0 0 0 10 5 0 0 0 0 15 5 0 4 0 4 0 0 0 4 4 ### ### ### ### 0 Clostridium fallax
Clostridium glycolicum 1 0 1 2 0 3 0 0 2 0 0 0 0 0 91 0 100 0 0 50 6 0 1 0 1 0 0 2 0 0 57 ### 0.0% ### ### 0 Clostridium glycolicum
Clostridium histolyticum 0 50 25 25 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 100 20 0 0 0 1 0 0 0 0 32 ### 0.1% ### ### 1 Clostridium histolyticum
Clostridium innocuum 0 0 0 0 10 0 90 0 0 0 99 0 0 0 0 0 0 0 0 0 80 0 0 0 1 0 0 0 0 0 72 ### 0.0% ### ### 3 Clostridium innocuum
Clostridium paraputrificum 0 0 0 100 80 35 90 0 0 100 26 0 0 5 0 0 0 0 0 0 47 0 0 0 0 0 0 0 0 0 50 ### 0.0% ### ### 2 Clostridium paraputrificum
Clostridium perfringens 1 62 95 97 14 75 57 0 52 95 97 95 24 1 95 10 0 0 5 10 98 5 5 5 48 24 0 0 0 0 18 ### 0.7% ### ### 0 Clostridium perfringens
Clostridium ramosum 0 0 30 100 85 82 80 0 0 100 25 25 0 0 0 0 0 50 0 0 10 0 0 0 0 0 0 0 0 0 31 ### 0.1% ### ### 1 Clostridium ramosum
Clostridium septicum 0 5 0 100 3 25 3 0 0 100 0 0 0 0 0 0 0 0 0 0 10 0 0 0 1 0 0 0 0 0 37 ### 0.0% ### ### 2 Clostridium septicum
Clostridium sordelii 1 97 1 1 1 1 15 0 0 0 0 0 0 0 99 1 0 99 0 0 8 15 0 1 0 1 1 0 1 0 0 36 ### 0.0% ### ### 0 Clostridium sordelii 1
Clostridium sordelii 2 97 89 1 99 1 99 0 0 0 0 0 0 0 99 11 0 99 0 0 1 78 0 11 0 89 78 0 1 0 0 28 ### 0.2% ### ### 0 Clostridium sordelii 2
Clostridium sporogenes 0 70 0 1 0 54 50 0 0 1 0 0 0 0 0 0 73 0 0 0 73 1 0 0 23 1 0 0 1 1 78 ### 0.0% ### ### 2 Clostridium sporogenes
Clostridium subterminale 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 46 0 54 38 100 90 90 90 62 15 0 0 0 0 8 58 ### 0.0% ### ### 3 Clostridium subterminale
Clostridium tertium 0 1 93 100 88 75 75 0 3 75 50 15 10 0 0 0 0 0 0 0 20 0 0 0 3 0 0 0 0 0 26 ### 0.3% ### ### 1 Clostridium tertium
Clostridium tetani 0 21 0 0 0 0 0 0 0 0 0 0 0 50 50 0 0 10 0 0 0 0 0 0 9 0 0 0 0 0 75 ### 0.0% ### ### 3 Clostridium tetani
Clostridium tyrobutyricum 0 0 0 1 0 0 0 0 0 0 50 0 85 0 0 0 0 0 0 0 32 0 0 5 0 0 0 0 0 0 58 ### 0.0% ### ### 2 Clostridium tyrobutyricum
Eggerthella lenta 7 97 0 0 0 0 0 0 0 0 0 0 20 0 1 70 20 0 20 20 0 20 20 5 10 5 0 12 0 30 79 ### 0.0% ### ### 2 Eggerthella lenta
Eubacterium limosum 0 4 0 0 0 0 7 0 0 0 22 4 0 0 25 5 9 88 0 0 0 0 0 26 50 4 0 0 0 0 69 ### 0.0% ### ### 3 Eubacterium limosum
Finegoldia magna 0 37 0 0 1 1 0 0 0 0 0 0 1 0 25 98 1 55 2 98 98 28 64 83 0 9 0 72 6 60 76 ### 0.0% ### ### 3 Finegoldia magna
Fusobacterium mortiferum 0 10 100 100 90 25 10 0 0 0 90 90 0 1 100 0 0 0 0 10 93 0 0 0 1 15 0 0 3 0 29 ### 0.2% ### ### 1 Fusobacterium mortiferum
Fusobacterium necrogenes 0 0 98 75 75 25 25 0 0 0 30 0 0 0 100 0 0 0 0 0 1 0 0 2 25 1 0 0 0 0 22 ### 0.4% ### ### 1 Fusobacterium necrogenes
Fusobacterium necrophorum 0 0 0 0 0 0 0 0 25 0 0 0 0 100 95 0 0 0 0 0 25 0 1 0 25 1 0 0 0 0 58 ### 0.0% ### ### 3 Fusobacterium necrophorum
Fusobacterium nucleatum 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 1 0 0 0 1 0 0 0 0 40 17 0 0 0 0 58 ### 0.0% ### ### 3 Fusobacterium nucleatum
Fusobacterium varium 1 0 0 0 0 0 0 0 0 0 50 0 0 90 0 0 0 0 0 0 99 0 0 0 50 1 0 0 0 0 58 ### 0.0% ### ### 2 Fusobacterium varium
Gemella morbillorum 0 28 0 58 0 78 20 0 6 50 83 0 13 0 7 86 26 13 66 71 0 93 92 20 0 0 0 70 0 75 45 ### 0.0% ### ### 2 Gemella morbillorum
Lactobacillus acidophillus 0 0 50 75 0 100 100 0 0 50 100 0 0 0 0 100 50 0 100 100 10 100 100 99 0 0 0 100 1 100 16 ### 0.9% ### ### 1 Lactobacillus acidophillus
Leptotrichia buccalis 0 0 50 10 99 95 100 0 0 13 100 50 10 0 99 0 0 0 0 0 50 3 0 0 10 3 0 3 0 0 55 ### 0.0% ### ### 1 Leptotrichia buccalis
Micromonas micros 0 10 0 0 0 0 10 0 0 0 10 0 0 0 100 99 90 90 99 100 90 80 100 90 10 1 0 100 80 100 72 ### 0.0% ### ### 3 Micromonas micros
Mobiluncus spp 0 83 42 8 0 67 0 0 0 0 0 0 0 0 0 99 100 42 8 50 0 0 0 100 0 0 0 75 0 1 43 ### 0.0% ### ### 1 Mobiluncus spp
Peptoniphilus asaccharolytic 5 11 0 0 0 9 2 0 2 0 9 0 0 92 12 83 3 3 0 57 0 70 0 22 0 11 0 79 1 4 56 ### 0.0% ### ### 2 Peptoniphilus asaccharolyticus
Peptoniphilus indolicus 0 18 0 0 0 0 0 0 0 0 0 0 15 100 100 100 0 1 0 25 0 62 0 25 0 18 0 100 0 1 74 ### 0.0% ### ### 3 Peptoniphilus indolicus
Peptostreptococcus anaerobi 0 8 0 0 0 100 0 0 0 0 4 1 1 0 0 4 99 0 0 0 0 0 0 16 16 1 0 0 1 1 71 ### 0.0% ### ### 3 Peptostreptococcus anaerobius
Porphyromonas asaccharolyt 0 0 0 1 0 0 4 0 0 1 0 0 0 100 100 14 0 100 14 74 0 0 100 0 0 85 0 29 80 0 58 ### 0.0% ### ### 2 Porphyromonas asaccharolytica
Porphyromonas endodontalis 0 0 0 0 0 0 0 0 0 1 0 0 0 100 100 0 0 99 0 1 0 0 100 0 0 1 0 1 1 0 58 ### 0.0% ### ### 3 Porphyromonas endodontalis
Porphyromonas gingivalis 0 50 0 100 71 0 0 0 0 100 0 0 0 100 93 100 0 100 0 0 21 0 100 0 14 0 0 0 93 1 53 ### 0.0% ### ### 2 Porphyromonas gingivalis
Prevotella bivia 0 0 0 100 99 99 1 0 1 100 92 15 0 0 100 46 0 100 8 31 0 8 100 96 46 98 0 46 98 1 58 ### 0.0% ### ### 2 Prevotella bivia
Prevotella buccae 0 0 100 100 67 89 89 99 0 3 67 67 0 0 100 0 0 100 0 0 0 0 100 0 0 5 0 0 56 0 17 ### 0.8% ### ### 1 Prevotella buccae
Prevotella buccalis 0 0 100 100 100 100 99 0 0 100 0 5 0 0 100 100 0 100 0 5 0 0 100 0 5 99 0 95 99 0 33 ### 0.0% ### ### 2 Prevotella buccalis
Prevotella denticola 0 0 89 100 100 100 36 0 0 100 72 63 0 0 100 17 0 100 0 30 0 0 100 0 0 90 0 10 85 0 38 ### 0.0% ### ### 2 Prevotella denticola
Prevotella disiens 0 0 10 0 0 100 0 0 0 0 20 0 0 0 98 98 0 100 1 25 0 10 100 98 0 0 0 85 100 0 54 ### 0.0% ### ### 2 Prevotella disiens
Prevotella intermedia 0 0 17 0 0 100 0 0 0 0 31 69 0 97 92 62 0 99 0 8 0 0 100 0 0 92 0 15 82 0 51 ### 0.0% ### ### 2 Prevotella intermedia
Prevotella loeschii 0 0 100 100 60 100 95 0 0 100 60 60 0 0 100 11 0 100 0 0 0 0 100 0 0 40 0 9 95 0 15 ### 1.0% ### ### 1 Prevotella loeschii
Prevotella melaninogenica 0 0 99 100 100 100 19 2 0 100 76 81 0 0 100 90 0 100 0 19 0 0 100 0 10 94 0 24 90 0 35 ### 0.0% ### ### 2 Prevotella melaninogenica
Prevotella oralis 0 0 66 95 77 100 77 0 0 95 66 44 0 0 100 44 0 100 0 16 0 0 100 3 0 48 0 33 62 0 24 ### 0.3% ### ### 1 Prevotella oralis
Propionibacterium acnes 0 62 0 69 0 23 0 0 0 90 46 0 85 62 0 88 100 54 8 69 1 8 85 91 0 0 0 8 0 69 47 ### 0.0% ### ### 2 Propionibacterium acnes
Propionibacterium granulos 0 1 40 20 0 99 20 20 0 20 50 1 0 0 0 0 95 20 0 0 0 0 95 93 0 0 0 0 0 25 30 ### 0.2% ### ### 1 Propionibacterium granulosum
Propionibacterium propioni 10 1 100 90 10 100 30 14 0 0 40 40 86 0 0 70 30 30 100 70 30 100 60 60 10 50 0 50 10 50 2 ### ### ### ### 0 Propionibacterium propionicum
Veillonella spp 1 69 0 1 0 0 3 0 0 0 0 0 100 0 6 0 0 0 0 6 63 0 0 0 0 1 0 1 0 1 77 ### 0.0% ### ### 1 Veillonella spp
1 Candida albicans 0.999 1.00 0 Excellente Id Excellente typicit -
2 Candida tropicalis 0.001 0.47 1 mauvaise indentifBonne typicité -

3 Candida famata 0.000 0.33 2 mauvaise indentifBonne typicité -
4 Saccharomyces cerevisiae 0.000 0.05 1 mauvaise indentifmauvaise typicité -
5 Candida parapsilosis 0.000 0.00 3 mauvaise indentifmauvaise typicité -
P(plus typique)
P(taxon/ profil)
P(taxon/ profil)
classement
SACcharose
GALactose
TRÉhalose
alpha-AMY
RAFfinose
béta-GUR
béta-MAL
béta-GAL
béta-XYL
GLUcose
bétaNAG
taxons
URÉase
API Candida V2.1
T
2006/02
profil + + + + - - + - - - + - ###
Candida albicans 100 100 100 90 3 3 90 0 0 0 99 0 1 ### ### ### ### 0 Candida albicans
Candida famata 100 70 96 93 1 1 0 1 0 0 0 5 3 ### 0.0% ### ### 2 Candida famata
Candida glabrata 100 1 0 100 1 0 0 0 0 0 0 0 9 ### 0.0% ### ### 3 Candida glabrata
Candida guilliermondii (C. f 100 100 100 35 99 93 0 99 0 0 0 0 14 ### 0.0% ### ### 2 Candida guilliermondii (C. famata possible)
Candida kefyr 100 100 100 3 100 0 0 88 0 0 0 100 15 ### 0.0% ### ### 4 Candida kefyr
Candida krusei (C. inconspi 100 5 0 0 0 0 1 0 0 0 0 0 13 ### 0.0% ### ### 3 Candida krusei (C. inconspicua, norvegensis possibles)
Candida lusitaniae 100 100 100 98 0 99 0 99 0 0 0 0 11 ### 0.0% ### ### 2 Candida lusitaniae
Candida parapsilosis 100 99 90 0 0 0 0 0 0 0 0 0 5 ### 0.0% ### ### 3 Candida parapsilosis
Candida tropicalis 100 100 100 100 0 94 99 1 0 0 0 0 2 ### 0.1% ### ### 1 Candida tropicalis
Cryptococcus neoformans 1 100 82 96 9 97 50 35 1 99 100 10 0 12 ### 0.0% ### ### 1 Cryptococcus neoformans 1
Cryptococcus neoformans 2 100 99 47 1 1 1 5 1 98 100 52 0 8 ### 0.0% ### ### 1 Cryptococcus neoformans 2
Geotrichum candidum/capit 100 100 1 1 1 0 0 1 0 0 0 0 10 ### 0.0% ### ### 2 Geotrichum candidum/capitatum
Saccharomyces cerevisiae 100 96 100 66 98 0 1 0 0 0 0 0 4 ### 0.0% ### ### 1 Saccharomyces cerevisiae
Trichosporon spp1 99 99 99 15 80 99 95 1 70 99 99 30 6 ### 0.0% ### ### 0 Trichosporon spp1
Trichosporon spp 2 85 50 1 1 1 99 75 1 9 80 99 20 7 ### 0.0% ### ### 0 Trichosporon spp 2
1 Candida famata 0.974 -0.02 0 Excellente Id mauvaise typicité -
2 Cryptococcus curvatus 0.021 -0.21 3 mauvaise indentifmauvaise typicité -
3 Cryptococcus humicola 0.003 -0.61 3 mauvaise indentifmauvaise typicité -
4 Cryptococcus neoformans 0.001 -0.53 3 mauvaise indentifmauvaise typicité -
5 Candida intermedia 0.001 -0.63 2 mauvaise indentifmauvaise typicité -
P(plus typique)
P(taxon/ profil)
P(taxon/ profil)
classement
MDG
MAN
NAG
taxons
RHA
GNT
MAL
2KG
GLU
GLN
ARA
GRT
MLZ
SOR
MEL
ACT
SAC
GLY
ERY
GAL
LAC
RAF
TRE
XYL
SBE
ESC
LAT
LVT
CEL
PLE
INO
RIB
ID 32 C V3.0 2006
T
profil + - + + + - + + + + + + + - + + + + + - + + + + + - - + - + - ###
Candida albicans 1 98 99 100 100 96 0 0 1 100 97 100 98 99 98 1 10 0 100 0 0 0 0 2 1 100 1 1 98 0 99 0 35 ### 0.0% ### ### 5 Candida albicans 1
Candida albicans 2 100 100 0 50 0 0 0 0 99 67 100 0 67 67 0 0 0 33 0 0 0 0 0 0 99 0 0 100 0 50 0 44 ### 0.0% ### ### 14 Candida albicans 2
Candida boidinii 5 100 0 86 75 0 0 0 0 0 0 0 99 99 100 99 0 0 100 0 0 0 0 1 100 0 0 100 1 67 0 48 ### 0.0% ### ### 13 Candida boidinii
Candida catenulata 100 74 1 67 75 0 0 0 33 33 0 0 74 2 0 91 0 0 0 0 0 0 17 0 100 0 0 100 0 74 0 40 ### 0.0% ### ### 11 Candida catenulata
Candida colliculosa 26 19 78 0 82 0 15 78 31 74 80 31 72 4 4 59 4 33 0 4 0 27 31 0 78 1 0 96 1 0 0 25 ### 0.0% ### ### 5 Candida colliculosa
Candida dattila 43 0 100 0 0 0 14 100 99 100 1 100 99 20 0 86 0 100 0 0 0 83 0 0 71 1 0 100 33 0 0 33 ### 0.0% ### ### 9 Candida dattila
Candida dubliniensis 100 100 100 90 10 0 0 0 100 11 99 0 100 3 0 0 0 1 0 0 0 0 0 0 100 0 0 100 0 60 42 ### 0.0% ### ### 12 Candida dubliniensis
Candida famata 100 13 100 97 43 83 91 93 100 99 99 100 100 75 2 99 38 100 66 19 40 100 52 1 100 31 0 100 75 75 65 1 ### ### ### ### 0 Candida famata
Candida glabrata 0 0 1 0 3 0 0 0 1 99 0 0 0 1 0 30 1 0 0 1 3 0 31 0 0 0 1 100 0 0 0 58 ### 0.0% ### ### 14 Candida glabrata
Candida globosa 0 0 60 33 0 0 0 60 50 0 75 60 80 0 0 60 0 60 0 0 0 0 60 0 60 0 0 60 60 25 0 37 ### 0.0% ### ### 10 Candida globosa
Candida guilliermondii 100 53 100 97 30 99 99 100 100 99 97 97 92 99 11 99 3 97 0 72 0 97 9 2 94 0 0 100 85 97 93 21 ### 0.0% ### ### 2 Candida guilliermondii
Candida hellenica 100 100 100 100 33 67 100 67 99 100 0 0 100 100 67 99 100 99 0 0 99 0 67 0 100 0 100 100 100 100 99 32 ### 0.0% ### ### 9 Candida hellenica
Candida holmii 88 50 88 0 0 0 0 88 0 75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 88 0 0 0 54 ### 0.0% ### ### 18 Candida holmii
Candida inconspicua/norv 1 0 0 0 94 0 0 0 0 0 0 0 6 0 0 91 0 0 0 0 0 0 0 1 6 0 0 99 0 86 0 53 ### 0.0% ### ### 15 Candida inconspicua/norvegensis
Candida intermedia 99 0 100 100 50 10 85 85 100 100 100 67 100 99 5 10 50 100 0 1 50 100 85 33 100 75 0 100 85 99 100 5 ### 0.1% ### ### 2 Candida intermedia
Candida kefyr 99 100 99 1 99 72 12 99 1 1 5 0 85 83 1 51 0 0 0 1 0 1 0 0 77 96 0 100 1 1 15 51 ### 0.0% ### ### 8 Candida kefyr
Candida krusei 1 3 1 90 99 0 0 0 1 0 0 0 1 1 0 95 1 1 1 1 0 0 3 1 1 1 0 100 1 5 0 55 ### 0.0% ### ### 8 Candida krusei
Candida lambica 0 0 0 96 100 0 0 0 0 0 0 0 4 97 0 89 0 0 0 0 0 0 0 0 0 0 0 100 0 89 0 56 ### 0.0% ### ### 17 Candida lambica
Candida lipolytica 0 100 0 97 97 0 0 0 0 0 0 0 54 0 11 100 0 0 100 0 0 0 77 0 84 0 0 100 0 3 0 45 ### 0.0% ### ### 14 Candida lipolytica
Candida lusitaniae 94 1 100 91 14 5 99 7 100 100 91 93 99 94 11 82 100 100 5 0 0 100 84 1 100 0 0 100 95 86 58 6 ### 0.1% ### ### 1 Candida lusitaniae
Candida magnoliae 0 0 98 0 0 0 0 75 0 0 63 0 100 0 20 100 0 0 0 0 0 0 99 0 100 0 0 100 83 0 0 43 ### 0.0% ### ### 14 Candida magnoliae
Candida melibiosica 100 0 100 50 1 0 100 50 100 100 100 2 100 99 50 50 35 100 0 50 1 100 89 1 100 0 0 100 50 50 99 20 ### 0.0% ### ### 1 Candida melibiosica
Candida membranaefacien 100 0 100 99 50 100 100 100 100 99 100 80 100 100 99 100 0 100 100 99 20 100 100 1 100 20 0 100 60 60 99 10 ### 0.0% ### ### 3 Candida membranaefaciens
Candida norvegica 0 0 0 0 83 0 80 0 0 0 0 0 50 67 0 83 33 0 0 0 0 0 0 1 83 0 0 83 0 0 17 52 ### 0.0% ### ### 15 Candida norvegica
Candida parapsilosis 100 25 100 100 1 96 2 1 100 96 93 98 100 96 1 93 1 100 0 0 1 99 92 70 100 1 0 100 72 97 0 24 ### 0.0% ### ### 1 Candida parapsilosis
Candida pelliculosa 43 0 100 0 96 0 70 99 100 97 0 96 97 85 9 100 0 96 90 0 1 96 19 0 100 0 0 100 0 0 79 19 ### 0.0% ### ### 5 Candida pelliculosa
Candida pulcherrima 99 0 100 100 0 0 83 0 100 99 100 99 100 83 80 100 20 100 0 0 0 100 83 0 100 0 0 100 100 99 0 9 ### 0.0% ### ### 6 Candida pulcherrima
Candida rugosa 75 0 1 36 75 1 0 0 0 0 0 0 99 75 0 67 0 0 0 0 0 0 18 0 99 0 0 99 64 30 0 46 ### 0.0% ### ### 13 Candida rugosa
Candida sake 80 26 90 90 30 0 28 2 90 85 80 31 85 74 20 83 0 85 2 0 1 67 30 5 85 0 0 85 67 70 67 13 ### 0.0% ### ### 1 Candida sake
Candida silvicola 40 100 90 60 50 75 100 0 75 100 1 20 100 80 100 100 99 75 60 0 0 75 40 0 100 0 0 100 1 60 25 14 ### 0.0% ### ### 4 Candida silvicola
Candida sphaerica 88 96 100 4 96 0 51 92 67 74 4 61 98 43 0 90 0 65 0 0 0 64 4 0 96 92 0 100 64 4 2 29 ### 0.0% ### ### 5 Candida sphaerica
Candida tropicalis 99 30 100 100 50 4 91 9 100 99 99 99 100 99 21 9 3 100 0 0 0 99 33 7 100 5 0 100 5 95 0 7 ### 0.0% ### ### 2 Candida tropicalis
Candida utilis 0 0 100 0 100 0 100 100 100 99 0 57 25 88 0 100 0 100 0 0 0 100 75 0 50 0 0 100 0 0 83 30 ### 0.0% ### ### 9 Candida utilis
Candida valida 0 0 0 79 14 0 0 0 0 0 0 0 0 0 0 62 0 0 0 0 0 0 0 0 0 0 0 100 0 86 0 57 ### 0.0% ### ### 18 Candida valida
Candida zeylanoides 0 46 0 99 0 0 0 0 0 53 87 0 97 0 0 100 0 0 0 0 0 0 1 0 100 0 0 100 53 50 0 47 ### 0.0% ### ### 14 Candida zeylanoides
Cryptococcus albidus 40 0 91 0 0 91 91 82 91 82 91 64 91 91 10 0 70 82 0 0 82 91 50 0 55 30 50 82 10 0 86 26 ### 0.0% ### ### 6 Cryptococcus albidus
Cryptococcus curvatus 100 17 100 100 75 17 100 75 50 67 100 33 83 100 100 99 33 50 67 0 99 50 100 0 60 100 67 100 0 83 67 2 ### ### ### ### 3 Cryptococcus curvatus
Cryptococcus humicola 99 71 100 92 100 86 100 43 100 100 100 100 100 100 100 99 99 100 99 100 100 50 100 71 99 100 99 100 71 99 20 3 ### 0.3% ### ### 3 Cryptococcus humicola
Cryptococcus laurentii 100 20 100 75 25 100 100 100 100 99 100 77 100 88 99 40 99 100 60 100 100 80 99 0 99 100 99 100 20 60 40 8 ### 0.0% ### ### 4 Cryptococcus laurentii
Cryptococcus neoformans 99 0 100 95 0 75 65 81 100 75 100 100 100 81 71 0 91 100 52 0 100 96 76 0 100 0 99 100 50 64 55 4 ### 0.1% ### ### 3 Cryptococcus neoformans
Cryptococcus terreus 83 0 0 100 0 100 100 0 1 58 100 0 99 100 99 0 67 0 0 0 99 1 100 0 100 85 69 100 91 33 33 41 ### 0.0% ### ### 10 Cryptococcus terreus
Cryptococcus uniguttulatu 0 0 100 100 0 99 0 99 100 100 100 100 99 100 0 33 33 100 0 0 100 100 67 0 99 0 100 100 0 99 0 27 ### 0.0% ### ### 8 Cryptococcus uniguttulatus
Debaryomyces etchellsii/c 90 0 100 91 36 18 50 0 100 64 99 100 100 60 12 60 0 100 12 0 0 99 12 0 100 0 0 100 91 30 0 12 ### 0.0% ### ### 4 Debaryomyces etchellsii/carsonii
Debaryomyces polymorph 100 98 100 100 1 50 99 100 100 100 100 100 100 95 25 40 1 100 60 60 0 100 63 0 100 60 0 100 99 99 33 18 ### 0.0% ### ### 2 Debaryomyces polymorphus
Geotrichum capitatum 31 92 0 0 33 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 92 25 0 0 59 ### 0.0% ### ### 19 Geotrichum capitatum
Geotrichum spp 90 100 0 0 94 5 0 0 0 0 0 0 99 99 0 99 0 0 0 0 0 0 0 1 95 0 0 100 99 0 50 60 ### 0.0% ### ### 17 Geotrichum spp
Kloeckera apis/apiculata 0 99 0 0 0 0 100 0 0 0 33 0 0 0 0 0 0 0 0 0 0 0 99 0 0 0 0 100 0 0 15 61 ### 0.0% ### ### 19 Kloeckera apis/apiculata
Kloeckera japonica 0 100 0 0 0 0 75 0 0 74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 85 0 0 0 62 ### 0.0% ### ### 21 Kloeckera japonica
Kodamaea ohmeri 99 0 100 100 0 0 99 99 100 100 100 100 100 0 20 100 0 100 0 0 0 0 0 0 100 0 0 100 80 99 20 17 ### 0.0% ### ### 7 Kodamaea ohmeri
Pichia farinosa 99 0 1 100 0 0 20 0 0 99 0 0 99 40 40 100 0 0 99 0 0 0 75 1 100 0 0 100 0 50 75 38 ### 0.0% ### ### 9 Pichia farinosa
Rhodotorula glutinis 80 9 99 0 0 61 28 92 84 97 30 25 55 70 68 66 9 74 0 0 3 84 28 0 55 0 0 99 20 0 9 22 ### 0.0% ### ### 5 Rhodotorula glutinis
Rhodotorula minuta 8 0 86 57 14 86 71 0 3 86 97 0 43 86 29 100 0 0 0 0 99 86 99 1 43 8 0 99 1 0 0 31 ### 0.0% ### ### 6 Rhodotorula minuta
Rhodotorula mucilaginosa 95 0 100 0 0 85 15 100 72 85 0 0 38 90 92 50 5 71 0 0 0 71 26 0 57 0 0 100 8 0 9 34 ### 0.0% ### ### 8 Rhodotorula mucilaginosa
Saccharomyces cerevisiae 63 1 89 4 65 1 7 89 91 34 0 28 2 0 2 5 2 28 1 5 0 15 4 0 2 2 2 100 1 2 0 39 ### 0.0% ### ### 3 Saccharomyces cerevisiae
Saccharomyces kluyverii 80 0 100 40 60 0 5 100 80 75 70 60 87 20 0 0 0 87 0 75 20 25 40 0 99 1 20 100 20 0 20 23 ### 0.0% ### ### 6 Saccharomyces kluyverii
Sporobolomyces salmonic 20 0 30 0 0 0 0 30 0 85 0 0 85 0 0 0 0 0 0 0 0 0 85 0 85 0 0 85 0 0 0 49 ### 0.0% ### ### 15 Sporobolomyces salmonicolor
Stephanoascus ciferrii 99 100 100 100 99 100 75 99 100 100 99 0 100 100 99 100 100 75 100 75 50 0 100 0 99 0 100 100 100 100 99 28 ### 0.0% ### ### 8 Stephanoascus ciferrii
Trichosporon inkin 99 50 100 99 100 0 100 0 100 97 100 100 1 100 100 50 0 100 70 1 75 95 100 1 97 100 97 100 25 70 15 ### 0.0% ### ### 4 Trichosporon inkin
Trichosporon asahii 99 99 100 100 100 98 100 0 100 95 100 99 30 100 100 75 75 100 98 1 98 70 100 1 17 100 25 100 17 98 35 11 ### 0.0% ### ### 3 Trichosporon asahii
Trichosporon mucoïdes 100 99 100 100 100 100 99 99 100 100 100 99 99 100 100 99 99 100 99 100 100 94 100 1 99 100 100 100 94 99 35 16 ### 0.0% ### ### 5 Trichosporon mucoïdes
Williopsis saturnus 0 0 100 0 90 0 100 100 20 20 0 20 60 100 0 99 20 20 0 0 0 15 70 0 20 0 0 100 0 0 0 36 ### 0.0% ### ### 9 Williopsis saturnus
Zygosaccharomyces spp 17 1 1 0 6 0 1 6 6 1 1 1 65 1 0 59 1 6 0 1 1 6 1 0 63 0 0 99 0 6 0 50 ### 0.0% ### ### 4 Zygosaccharomyces spp
1 Cryptococcus albidus 0.615 -3.92 0 TB Id mauvaise typicité -
2 Cryptococcus neoformans 0.052 -4.19 0 mauvaise indentifmauvaise typicité -
3 Cryptococcus uniguttulatus 0.039 -4.23 0 mauvaise indentifmauvaise typicité -
4 Candida famata 0.039 -4.16 0 mauvaise indentifmauvaise typicité -
5 Cryptococcus terreus 0.036 -4.16 1 mauvaise indentifmauvaise typicité -
P(plus typique)
P(taxon/ profil)
P(taxon/ profil)
classement
taxons
HYPH
MDG
SOR
ADO
NAG
GLU
SAC
ARA
MAL
2KG
GLY
GAL
MLZ
RAF
LAC
TRE
CEL
XYL
API 20 C AUX V4. XLT
INO
T
profil + - + + - ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ###
Candida albicans 1 100 14 99 2 88 94 90 99 0 94 85 99 0 0 99 97 97 5 0 99 13 ### 0.8% ### ### 0 Candida albicans 1

Candida albicans 2 100 1 99 1 90 1 75 99 0 70 1 99 0 0 90 1 5 1 0 99 17 ### 0.4% ### ### 0 Candida albicans 2
Candida boidinii 100 55 1 0 89 70 89 25 0 95 1 55 0 0 1 1 1 0 0 100 40 ### 0.0% ### ### 1 Candida boidinii
Candida colliculosa 100 96 100 0 0 0 5 13 0 60 1 0 0 0 3 99 60 0 96 25 21 ### 0.2% ### ### 1 Candida colliculosa
Candida dubliniensis 100 96 99 0 1 99 50 100 1 99 0 40 0 0 100 60 1 0 0 99 22 ### 0.2% ### ### 1 Candida dubliniensis
Candida famata 100 96 98 60 60 98 75 99 0 100 99 99 89 70 100 100 96 78 75 1 4 ### ### ### ### 0 Candida famata
Candida glabrata 100 20 0 0 0 0 0 0 0 0 0 0 0 0 0 0 94 0 0 1 32 ### 0.0% ### ### 2 Candida glabrata
Candida guilliermondii 100 99 97 79 85 97 92 99 0 97 88 99 95 0 94 100 99 90 95 46 16 ### 0.5% ### ### 0 Candida guilliermondii
Candida kefyr 100 27 0 1 18 1 25 100 0 34 0 0 1 95 1 100 1 1 96 75 33 ### 0.0% ### ### 1 Candida kefyr
Candida kruzei/inconspic 99 73 0 0 0 0 0 6 0 2 0 64 0 0 0 0 0 0 0 79 34 ### 0.0% ### ### 2 Candida kruzei/inconspicua
Candida lusitaniae 100 90 95 1 65 95 20 30 0 99 60 95 80 0 100 99 100 99 0 75 24 ### 0.1% ### ### 0 Candida lusitaniae
Candida magnoliae 100 32 50 0 0 0 0 10 0 60 0 0 0 0 2 97 10 1 75 1 12 ### ### ### ### 1 Candida magnoliae
Candida norvegensis 100 85 0 0 0 0 0 2 0 0 0 0 25 0 0 0 0 0 0 93 36 ### 0.0% ### ### 2 Candida norvegensis
Candida parapsilosis 100 94 88 89 98 93 3 99 0 99 89 99 0 0 100 100 93 99 1 99 18 ### 0.4% ### ### 0 Candida parapsilosis
Candida pelliculosa 100 99 0 0 67 1 1 56 0 70 95 1 70 0 97 99 87 96 30 70 43 ### 0.0% ### ### 2 Candida pelliculosa
Candida rugosa 100 74 0 1 70 1 26 99 0 94 0 59 0 0 0 0 0 0 0 99 38 ### 0.0% ### ### 1 Candida rugosa
Candida sphaerica 1 100 31 2 0 2 0 62 99 0 99 68 0 35 1 95 100 99 29 76 99 26 ### 0.1% ### ### 1 Candida sphaerica 1
Candida sphaerica 2 100 88 1 0 1 0 36 94 0 99 50 0 31 99 80 100 53 80 64 1 37 ### 0.0% ### ### 1 Candida sphaerica 2
Candida tropicalis 100 9 99 1 96 99 12 99 0 99 69 99 17 1 99 73 100 72 5 99 23 ### 0.1% ### ### 0 Candida tropicalis
Candida utilis 100 99 0 0 60 0 1 5 0 1 3 0 37 0 98 96 16 72 79 69 42 ### 0.0% ### ### 2 Candida utilis
Candida zeylanoides 100 100 87 0 0 1 0 1 0 99 0 99 0 0 0 0 74 0 0 75 31 ### 0.0% ### ### 2 Candida zeylanoides
Cryptococcus albidus 100 0 98 80 81 0 0 6 30 60 65 0 99 10 98 100 82 81 51 1 1 ### ### ### ### 0 Cryptococcus albidus
Cryptococcus humicola 100 82 100 100 100 36 64 100 100 95 100 100 98 100 100 99 99 95 99 99 14 ### 0.7% ### ### 1 Cryptococcus humicola
Cryptococcus laurentii 100 6 92 99 99 69 76 99 84 53 76 92 96 99 92 99 92 96 99 25 6 ### ### ### ### 0 Cryptococcus laurentii
Cryptococcus neoformans 100 0 100 14 91 71 1 93 97 100 99 88 10 0 99 99 75 97 88 25 2 ### ### ### ### 0 Cryptococcus neoformans
Cryptococcus terreus 100 0 100 87 100 0 0 45 50 99 0 96 96 36 0 0 54 0 0 1 5 ### ### ### ### 1 Cryptococcus terreus
Cryptococcus uniguttulatu 100 3 99 99 99 3 0 1 99 50 99 100 0 0 100 100 75 100 7 25 3 ### ### ### ### 0 Cryptococcus uniguttulatus
Geotrichum capitatum 95 92 0 0 0 0 0 25 0 10 0 2 0 0 0 0 0 0 0 95 39 ### 0.0% ### ### 2 Geotrichum capitatum
Geotrichum klebahnii 100 100 0 0 92 0 0 75 0 88 0 0 0 0 0 0 0 0 0 92 44 ### 0.0% ### ### 3 Geotrichum klebahnii
Kloeckera spp 100 0 50 1 0 0 0 0 0 0 0 0 96 0 0 0 0 0 0 1 9 ### ### ### ### 0 Kloeckera spp
Kodamaea ohmeri 100 99 96 0 0 66 0 84 0 93 98 99 56 0 99 99 93 0 80 84 29 ### 0.0% ### ### 1 Kodamaea ohmeri
Pichia angusta 100 84 0 1 1 66 36 0 0 99 1 1 20 0 94 90 46 97 0 2 35 ### 0.0% ### ### 1 Pichia angusta
Prototheca wickerhamii 100 100 0 0 0 0 0 55 0 0 0 0 0 0 0 0 100 0 0 1 41 ### 0.0% ### ### 3 Prototheca wickerhamii
Rhodotorula glutinis 100 15 91 0 0 8 0 50 0 84 3 0 1 0 91 100 59 84 96 1 8 ### ### ### ### 1 Rhodotorula glutinis
Rhodotorula minuta 100 100 100 98 95 3 0 0 0 5 0 85 60 1 0 95 95 95 0 1 20 ### 0.2% ### ### 1 Rhodotorula minuta
Rhodotorula mucilaginosa 100 5 4 15 33 92 61 10 0 5 0 0 0 0 33 100 5 1 87 25 11 ### ### ### ### 0 Rhodotorula mucilaginosa 1
Rhodotorula mucilaginosa 100 60 1 80 80 64 52 80 0 60 1 0 1 0 98 100 95 86 98 25 19 ### 0.3% ### ### 0 Rhodotorula mucilaginosa 2
Saccharomyces cerevisiae 100 8 0 0 0 0 0 78 0 1 13 0 0 0 75 90 2 1 62 30 30 ### 0.0% ### ### 2 Saccharomyces cerevisiae 1
Saccharomyces cerevisiae 100 1 0 0 0 0 0 99 0 1 29 0 0 0 99 99 99 85 81 25 27 ### 0.0% ### ### 2 Saccharomyces cerevisiae 2
Sporobolomyces salmonic 100 1 0 0 0 0 0 5 0 80 0 0 0 0 0 100 85 0 70 90 27 ### 0.0% ### ### 2 Sporobolomyces salmonicolor
Stephanoascus ciferrii 100 80 80 100 100 71 60 100 100 43 0 99 60 0 99 100 99 0 99 100 15 ### 0.7% ### ### 1 Stephanoascus ciferrii
Trichosporon asahii 100 20 100 100 100 0 5 100 0 1 94 100 100 100 100 98 66 20 0 95 7 ### ### ### ### 1 Trichosporon asahii
Trichosporon inkin 100 4 100 0 98 0 0 95 98 0 100 57 100 95 100 100 95 89 0 95 25 ### 0.1% ### ### 1 Trichosporon inkin
Trichosporon mucoïdes 100 40 99 74 100 53 65 100 92 78 100 94 100 100 100 100 78 82 99 95 10 ### ### ### ### 1 Trichosporon mucoïdes

Identification 2009

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Identification 2009

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Feuilles de calcul pour l'identification microbienne

Quelques remarques techniques :

xxx 0 0 0 0 10 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 190 ### 0.5% ### ### 3 xxx

2 Edwardsiella tarda 0.202 -0.41 3 mauvaise indentifmauvaise typicité -

3 Salmonella choleraesuis ssp choleraesuis 0.177 -0.37 2 mauvaise indentifmauvaise typicité -

4 Escherichia coli 2 0.144 -0.22 0 mauvaise indentifmauvaise typicité -

5 Edwardsiella hoshinae 0.025 -0.53 2 mauvaise indentifmauvaise typicité -

2 Serratia odorifera 0.176 0.84 0 mauvaise indentifExcellente typicit -

3 Citrobacter farmeri 0.036 0.67 1 mauvaise indentifTB typicité -

Citrobacter koseri/amalona 97 100 95 0 86 87 0 2 0 92 0 99 7 ### 0.3% ### ### 1 Citrobacter koseri/amalonaticus

2 Kluyvera spp 0.117 0.03 1 mauvaise indentifmauvaise typicité -

3 Yersinia enterocolitica 0.079 -0.03 0 mauvaise indentifmauvaise typicité -

4 Pantoea ssp 2 0.049 -0.10 2 mauvaise indentifmauvaise typicité -

5 Escherichia coli 1 0.023 -0.15 1 mauvaise indentifmauvaise typicité -

4 Vibrio parahaemlyticus 0.000 -0.21 3 mauvaise indentifmauvaise typicité -

5 Aeromonas sobria 0.000 0.04 2 mauvaise indentifmauvaise typicité -

3 Comamonas testosteroni/Ps. alcaligenes 0.004 0.03 0 mauvaise indentifmauvaise typicité -

4 Pseudomonas fluorescens 0.002 -0.08 0 mauvaise indentifmauvaise typicité -

5 Acinetobacter baumannii/ calcoaceticus 0.001 -0.16 2 mauvaise indentifmauvaise typicité -

API 20 NE 7.0 (02

4 Streptococcus porcinus 0.008 0.08 0 mauvaise indentifmauvaise typicité -

5 Streptococcus uberis 0.005 0.12 0 mauvaise indentifmauvaise typicité -

Abiotrophia adiacens 0 0 10 80 0 25 0 0 99 0 0 0 0 0 0 0 0 0 0 0 0 45 ### 0.0% ### ### 8 Abiotrophia adiacens

2 Enterococcus gallinarum 0.333 -2.85 5 Bonne Id mauvaise typicité -

3 Enterococcus cecorum 0.060 -2.82 8 mauvaise indentifmauvaise typicité -

4 Enterococcus casseliflavus 0.011 -3.06 6 mauvaise indentifmauvaise typicité -

5 Enterococcus faecium 2 0.000 -3.61 5 mauvaise indentifmauvaise typicité -

4 Kocuria kristinae 0.000 -0.29 0 mauvaise indentifmauvaise typicité -

5 Staphylococcus capitis 0.000 -0.18 1 mauvaise indentifmauvaise typicité -

4 Staphylococcus hominis 2 0.005 0.00 1 mauvaise indentifmauvaise typicité -

5 Staphylococcus xylosus 0.002 0.14 1 mauvaise indentifmauvaise typicité -

2 Neisseria cinerea 0.001 0.45 1 mauvaise indentifBonne typicité -

4 Listeria welshimeri 0.000 -0.20 2 mauvaise indentifmauvaise typicité -

5 Listeria seeligeri 0.000 -0.70 3 mauvaise indentifmauvaise typicité -

API Listeria 1.2

3 Arcanobacterium haemolyticum 0.000 0.08 1 mauvaise indentifmauvaise typicité -

4 Corynebacterium jeikeium 0.000 -0.10 3 mauvaise indentifmauvaise typicité -

5 Corynebacterium group G Phosphatase Alcaline

2 Arcobacter cryaerophilus 0.133 -4.72 1 mauvaise indentifmauvaise typicité -

3 Campylobacter jejuni spp jejuni 1 0.067 -4.77 1 mauvaise indentifmauvaise typicité -

4 Helicobacter fennelliae 0.045 -4.90 2 mauvaise indentifmauvaise typicité -

5 Campylobacter mucosalis 0.016 -4.92 2 mauvaise indentifmauvaise typicité -

Arcobacter cryaerophilus 20 82 68 0 0 42 0 0 0 82 0 0 57 5 1 76 35 6 0 0 99 2 ### ### ### ### 1 Arcobacter cryaerophilus

2 Bacillus cereus 1 0.196 -4.88 0 mauvaise indentifmauvaise typicité -

3 Bacillus cereus 2 0.103 -4.94 0 mauvaise indentifmauvaise typicité -

4 Bacillus coagulans 0.020 -4.97 0 mauvaise indentifmauvaise typicité -

5 Bacillus licheniformis 0.005 -5.14 0 mauvaise indentifmauvaise typicité -

Aneurinbacillus aneurinilytic 9 9 0 0 66 0 9 0 0 9 9 33 9 0 0 0 33 9 9 9 0 90 18 ### 0.0% ### ### 2 Aneurinbacillus aneurinilyticus

2 Paenibacillus lautus 0.193 -13.62 0 mauvaise indentifmauvaise typicité -

3 Bacillus circulans 0.136 -13.43 0 mauvaise indentifmauvaise typicité -

4 Bacillus coagulans 0.037 -13.42 0 mauvaise indentifmauvaise typicité -

5 Paenibacillus glucanolyticus 0.019 -13.78 1 mauvaise indentifmauvaise typicité -

Aneurinibacillus aneurinil 50 0 0 9 33 9 0 0 0 33 33 33 9 0 0 0 0 9 0 9 0 9 9 9 9 9 9 9 33 9 33 9 0 0 9 0 0 0 9 0 0 9 0 0 0 0 0 0 0 11 ### 0.2% ### ### 1 Aneurinibacillus aneurinilyticus

2 Clostridium innocuum 0.051 -5.53 1 mauvaise indentifmauvaise typicité -

3 Clostridium cadaveris 0.045 -5.60 1 mauvaise indentifmauvaise typicité -

4 Clostridium difficile 0.042 -5.52 1 mauvaise indentifmauvaise typicité -

5 Eubacterium limosum 0.037 -5.64 1 mauvaise indentifmauvaise typicité -

Actinomyces israelii 0 0 99 99 89 99 99 99 99 97 0 30 25 90 90 38 82 40 45 90 1 0 100 0 12 ### 0.6% ### ### 1 Actinomyces israelii

2 Propionibacterium propionicum 0.191 -7.00 0 mauvaise indentifmauvaise typicité -

3 Actinomyces naeslundii 0.156 -7.16 0 mauvaise indentifmauvaise typicité -

4 Clostridium fallax 0.078 -7.39 0 mauvaise indentifmauvaise typicité -

5 Bacteroides caccae 0.023 -7.54 0 mauvaise indentifmauvaise typicité -

Actinomyces israelii 0 36 100 90 100 100 81

2 Candida tropicalis 0.001 0.47 1 mauvaise indentifBonne typicité -